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The map label for this gene is ybeD [C]

Identifier: 71905931

GI number: 71905931

Start: 331092

End: 331361

Strand: Reverse

Name: ybeD [C]

Synonym: Daro_0289

Alternate gene names: 71905931

Gene position: 331361-331092 (Counterclockwise)

Preceding gene: 71905932

Following gene: 71905930

Centisome position: 7.36

GC content: 59.63

Gene sequence:

>270_bases
ATGGCTTCGTACAAGGACACCCTCCTCGAATTCCCGTGTGAATTCCCCCTGAAGATCATGGGCAAGGCTGATGACAGCCT
GGCTCAGGTCGTCCTCGACATCGTCACCGTGCACGCCCCGGATTTCGACGGCGCCAGCATGGAAATGCGCGCCAGCTCTG
GCGGCAACTACCTGAGCCTGACGTGCACCGTGATTGCCCGCTCCAAGCCACAACTCGACGCGCTCTACACCGACCTCAGT
GGTCATCCGATGATCAAGGTCGTCCTCTAA

Upstream 100 bases:

>100_bases
GATGGCGAGCCAGTCGGCACCGGCAAACCCGGCCCGTTCGGCGAGCAGATGTGGCAGTGGTATCAGGATTTCAAGAACAC
CGTAATGCGTAAAGGCTGAG

Downstream 100 bases:

>100_bases
GTGCCTCCTGTCGTCAAACGCCTGGGCCGGGTCGATTACCAACCCACGTTCCAGGCCATGCAGGACTTCACGGCCAGCCG
TACGGCCGAAACCCCGGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MASYKDTLLEFPCEFPLKIMGKADDSLAQVVLDIVTVHAPDFDGASMEMRASSGGNYLSLTCTVIARSKPQLDALYTDLS
GHPMIKVVL

Sequences:

>Translated_89_residues
MASYKDTLLEFPCEFPLKIMGKADDSLAQVVLDIVTVHAPDFDGASMEMRASSGGNYLSLTCTVIARSKPQLDALYTDLS
GHPMIKVVL
>Mature_88_residues
ASYKDTLLEFPCEFPLKIMGKADDSLAQVVLDIVTVHAPDFDGASMEMRASSGGNYLSLTCTVIARSKPQLDALYTDLSG
HPMIKVVL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 9650; Mature: 9519

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASYKDTLLEFPCEFPLKIMGKADDSLAQVVLDIVTVHAPDFDGASMEMRASSGGNYLSL
CCCCCCHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEE
TCTVIARSKPQLDALYTDLSGHPMIKVVL
EEEEEECCCCCCCEEEECCCCCCEEEEEC
>Mature Secondary Structure 
ASYKDTLLEFPCEFPLKIMGKADDSLAQVVLDIVTVHAPDFDGASMEMRASSGGNYLSL
CCCCCHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEE
TCTVIARSKPQLDALYTDLSGHPMIKVVL
EEEEEECCCCCCCEEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12700255 [H]