| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71905684
Identifier: 71905684
GI number: 71905684
Start: 49624
End: 49986
Strand: Reverse
Name: 71905684
Synonym: Daro_0042
Alternate gene names: NA
Gene position: 49986-49624 (Counterclockwise)
Preceding gene: 71905686
Following gene: 71905683
Centisome position: 1.11
GC content: 60.88
Gene sequence:
>363_bases ATGCCCAAGCTCACCGCTTTTTCGACCACCACCCCACCCCCATCCTATGACCGGCCCAGGCCGGACCGCCTGGTCAAGGG CAACCCGCTGCGCACCACCTGGGAACATTTCCTGACCGAAAACGGCGATCTGTCGGCCGGCATCTGGTCCTGCGAACCCG GCGCCTGGAATATCGCCTTTGCCCCAGGAAAAGATGAATTCTTCTGCATCATCGAGGGCCGTCTGCGGATCACCGACAGC GACCAGCAAGCCAGCGAATTCGGCCCCGGGGATGCCTGCATCATTCCAGCCGGCTTCACAGGCACCTTCGAAGTTCTCGA AGCCGTCCGCAAACACTATGTGCTGATAGAACGGCGGACATGA
Upstream 100 bases:
>100_bases AAGAAGGGGGATATCAGGAAGCGGACAAAACTCATGCACGAATTATCGCGGCAAATTAAGATATTTGCCCCAGCCCTGCC TAGCTCCTGATTTCCTGACC
Downstream 100 bases:
>100_bases ATTGCGCTATAGTTTGGCGGAAAAAGAGGGGAATACATGACTGTCGAGATAAACCAACCACGCGGTACTAGCGCCCATAT GCCGGACCTCAACTGGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MPKLTAFSTTTPPPSYDRPRPDRLVKGNPLRTTWEHFLTENGDLSAGIWSCEPGAWNIAFAPGKDEFFCIIEGRLRITDS DQQASEFGPGDACIIPAGFTGTFEVLEAVRKHYVLIERRT
Sequences:
>Translated_120_residues MPKLTAFSTTTPPPSYDRPRPDRLVKGNPLRTTWEHFLTENGDLSAGIWSCEPGAWNIAFAPGKDEFFCIIEGRLRITDS DQQASEFGPGDACIIPAGFTGTFEVLEAVRKHYVLIERRT >Mature_119_residues PKLTAFSTTTPPPSYDRPRPDRLVKGNPLRTTWEHFLTENGDLSAGIWSCEPGAWNIAFAPGKDEFFCIIEGRLRITDSD QQASEFGPGDACIIPAGFTGTFEVLEAVRKHYVLIERRT
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13400; Mature: 13269
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLTAFSTTTPPPSYDRPRPDRLVKGNPLRTTWEHFLTENGDLSAGIWSCEPGAWNIAF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCEEEEE APGKDEFFCIIEGRLRITDSDQQASEFGPGDACIIPAGFTGTFEVLEAVRKHYVLIERRT CCCCCCEEEEEECEEEEECCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHEEEEEECC >Mature Secondary Structure PKLTAFSTTTPPPSYDRPRPDRLVKGNPLRTTWEHFLTENGDLSAGIWSCEPGAWNIAF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCEEEEE APGKDEFFCIIEGRLRITDSDQQASEFGPGDACIIPAGFTGTFEVLEAVRKHYVLIERRT CCCCCCEEEEEECEEEEECCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA