| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
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The map label for this gene is yfkN [H]
Identifier: 71893979
GI number: 71893979
Start: 829353
End: 831089
Strand: Reverse
Name: yfkN [H]
Synonym: MHJ_0631
Alternate gene names: 71893979
Gene position: 831089-829353 (Counterclockwise)
Preceding gene: 71893984
Following gene: 71893978
Centisome position: 92.61
GC content: 33.97
Gene sequence:
>1737_bases ATTTTTCATACAAACGACGAACACGGTCGCTTAGAATATGATGATAACAAACACAATAATTATTCAGGGATGGATAAAAC GGGACAGTACTTGAAAAAATTTAACAAGGATTTACTTTTATCTGCCGGAGATTTAATTCAAGGACTTCCACTTTCGGATA CAGATAAAGGTAAGACAATTGCAAAAATTGCCAAATATATAGGCTATGATTCAGTTGCGATTGGAAACCATGAATTCGAC TATGGAATTAGACACATTCTTGATCTTGCCGCCGAGGGAAACAAAGATGAATTTAGCCGAAAAATGCCTTTTATTTCCGC TAATGTTTACTGAAGACAACCTTCAGAAGAGGAACTTAAAAATTTAGAATCTACAGATGAAAGAGCCATAAAACCAGCTG AATTTAAACAAGGGAAGCGAGTTTTCCAACCTTATATAATAAAGGAATTAGAAAATGGTCTAAAAGTTGCAGTTATCGGG CTGACAACTCCAGATACAAAAATTACTTCCCACCCAAAAAATTCTTTTTGAGTTGAATTTACCGATCCAGTACCTGAAAC CCAAAAGGTAATTAAGGAGATTCAGGAAAAAGATCCTTCAATTTCCTTTATAATTGCTACAACGCACCTAGGTGTTGGGC GCACAGAACATAAATGAACTTCAGATTATCTTGCAGAACAAACCGGAAATGGCCTTGATTTAGTCATCGATGGGCATTCG CATACAAAAATCGAAATTCACAAACCCAAAGAAGATAAAAAAGTTTGGGTAACCCAAACTGAGGCCTATGCAAAATGGCT CGGGGACATTGATTTAGTTTTTGATACTGAAACTGGCGAGATAGTAAAAATTGTACAATCTTTAAGAGATATTAACCAAA TCAATATTGTAACCAGAGATTTATCAGAACATTATATCAAAAAACTTCATAAAGTTTATGATGTAGAAAATGATGTAAAA GTATTTAATTCGCCTGGTGTTTTTGAACATGTTCAATCAATTGAGATCAACAAAACTCCTTACTGAATTGGACGGGTAAA ACCAACTTCATTAGGGGTAATGACAGCAGATGCCATTGCTTGGGAATATGCAAAAAGTTCAAAAGAACAAGTACAAAGTA CGAAAAATGAAATTGCAACACTTGATAATTCCTTAGGACTTATAAACGGTGGTAGTCTTAGAACAGATCTAAAAAGTGGT GAAATCAAAAGAGGAGATGTTTTAGGGGTTAGTCCTTTTGGGAATAGGATTGTAACTATTAAACTAAAAGGAGATACACT TAAAAAAACTCTCGAATACGGACTTTCTATGGGGAAACAAGGCGCATTTGCCCAACTATCTTCAAATATTTCCTATAAAG TCAAAGTTGAAAAAGGGACTGATCCGAAAACCAAAATAGAATCCTGGGTTTGAAAACCAGATACAACATCCTTTAAAATT AATAACAAGCCGATTGATGATAACAAATTTTACTATTTAAGCACAAATGATTATCTTTCAGCGGGCGGGGACGGCTATCA AATGTTAAATCTAGGTAAAAACAGGGATATTGAAAAAGTTTATGAGGGAGTTCAATATATTGATTCTTTAATTAAATATG GTCAATATTTGGACAAATTAACTAAAGATTCAAGTCAAAAAGATCTATTTGCCCACACATTCCAAGAATATTTAAGTTCT GATTTTACAAAAAATCAACAAGTTGAGATTCCTCAAGAAGCTCTAACGAAAAGCTAA
Upstream 100 bases:
>100_bases CCAAGCCAAAATTGATCCCCTAATTGATCAGGTCAATTATCTTTTTAAAAAATTGCATGAATTAGAAAAAAAAGAAAATT CAAAACTTAAAACTGTAAAA
Downstream 100 bases:
>100_bases AGTCAATCTTAATTATTTTAATTTTTTTAAAAAGACACACTTTTGAGTGTGTTTTTTTATTTTTTTACCTTTTTTTGCAA AAAAAAAAAAAAAAAAAGGT
Product: putative 5'-nucleotidase precursor
Products: NA
Alternate protein names: 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; 5'-nucleotidase [H]
Number of amino acids: Translated: 578; Mature: 578
Protein sequence:
>578_residues MFHTNDEHGRLEYDDNKHNNYSGMDKTGQYLKKFNKDLLLSAGDLIQGLPLSDTDKGKTIAKIAKYIGYDSVAIGNHEFD YGIRHILDLAAEGNKDEFSRKMPFISANVYWRQPSEEELKNLESTDERAIKPAEFKQGKRVFQPYIIKELENGLKVAVIG LTTPDTKITSHPKNSFWVEFTDPVPETQKVIKEIQEKDPSISFIIATTHLGVGRTEHKWTSDYLAEQTGNGLDLVIDGHS HTKIEIHKPKEDKKVWVTQTEAYAKWLGDIDLVFDTETGEIVKIVQSLRDINQINIVTRDLSEHYIKKLHKVYDVENDVK VFNSPGVFEHVQSIEINKTPYWIGRVKPTSLGVMTADAIAWEYAKSSKEQVQSTKNEIATLDNSLGLINGGSLRTDLKSG EIKRGDVLGVSPFGNRIVTIKLKGDTLKKTLEYGLSMGKQGAFAQLSSNISYKVKVEKGTDPKTKIESWVWKPDTTSFKI NNKPIDDNKFYYLSTNDYLSAGGDGYQMLNLGKNRDIEKVYEGVQYIDSLIKYGQYLDKLTKDSSQKDLFAHTFQEYLSS DFTKNQQVEIPQEALTKS
Sequences:
>Translated_578_residues MFHTNDEHGRLEYDDNKHNNYSGMDKTGQYLKKFNKDLLLSAGDLIQGLPLSDTDKGKTIAKIAKYIGYDSVAIGNHEFD YGIRHILDLAAEGNKDEFSRKMPFISANVY*RQPSEEELKNLESTDERAIKPAEFKQGKRVFQPYIIKELENGLKVAVIG LTTPDTKITSHPKNSF*VEFTDPVPETQKVIKEIQEKDPSISFIIATTHLGVGRTEHK*TSDYLAEQTGNGLDLVIDGHS HTKIEIHKPKEDKKVWVTQTEAYAKWLGDIDLVFDTETGEIVKIVQSLRDINQINIVTRDLSEHYIKKLHKVYDVENDVK VFNSPGVFEHVQSIEINKTPY*IGRVKPTSLGVMTADAIAWEYAKSSKEQVQSTKNEIATLDNSLGLINGGSLRTDLKSG EIKRGDVLGVSPFGNRIVTIKLKGDTLKKTLEYGLSMGKQGAFAQLSSNISYKVKVEKGTDPKTKIESWV*KPDTTSFKI NNKPIDDNKFYYLSTNDYLSAGGDGYQMLNLGKNRDIEKVYEGVQYIDSLIKYGQYLDKLTKDSSQKDLFAHTFQEYLSS DFTKNQQVEIPQEALTKS >Mature_578_residues MFHTNDEHGRLEYDDNKHNNYSGMDKTGQYLKKFNKDLLLSAGDLIQGLPLSDTDKGKTIAKIAKYIGYDSVAIGNHEFD YGIRHILDLAAEGNKDEFSRKMPFISANVY*RQPSEEELKNLESTDERAIKPAEFKQGKRVFQPYIIKELENGLKVAVIG LTTPDTKITSHPKNSF*VEFTDPVPETQKVIKEIQEKDPSISFIIATTHLGVGRTEHK*TSDYLAEQTGNGLDLVIDGHS HTKIEIHKPKEDKKVWVTQTEAYAKWLGDIDLVFDTETGEIVKIVQSLRDINQINIVTRDLSEHYIKKLHKVYDVENDVK VFNSPGVFEHVQSIEINKTPY*IGRVKPTSLGVMTADAIAWEYAKSSKEQVQSTKNEIATLDNSLGLINGGSLRTDLKSG EIKRGDVLGVSPFGNRIVTIKLKGDTLKKTLEYGLSMGKQGAFAQLSSNISYKVKVEKGTDPKTKIESWV*KPDTTSFKI NNKPIDDNKFYYLSTNDYLSAGGDGYQMLNLGKNRDIEKVYEGVQYIDSLIKYGQYLDKLTKDSSQKDLFAHTFQEYLSS DFTKNQQVEIPQEALTKS
Specific function: Catalyzes the release of inorganic phosphate from 2',3'- cyclic nucleotides through consecutive 2',3'-phosphodiesterase and 3'- (or 2') nucleotidase activities. Also possesses a 5'- nucleotidase activity. Does not catalyze the release of inorganic phospha
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5'-nucleotidase family [H]
Homologues:
Organism=Homo sapiens, GI4505467, Length=555, Percent_Identity=24.8648648648649, Blast_Score=94, Evalue=3e-19, Organism=Escherichia coli, GI1786687, Length=547, Percent_Identity=25.7769652650823, Blast_Score=140, Evalue=2e-34, Organism=Drosophila melanogaster, GI19922444, Length=556, Percent_Identity=24.6402877697842, Blast_Score=113, Evalue=4e-25, Organism=Drosophila melanogaster, GI28573524, Length=550, Percent_Identity=23.8181818181818, Blast_Score=102, Evalue=9e-22,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008334 - InterPro: IPR006146 - InterPro: IPR006179 - InterPro: IPR019931 - InterPro: IPR004843 - InterPro: IPR001899 [H]
Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]
EC number: =3.1.3.6; =3.1.4.16; =3.1.3.5 [H]
Molecular weight: Translated: 64500; Mature: 64500
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00786 5_NUCLEOTIDASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHTNDEHGRLEYDDNKHNNYSGMDKTGQYLKKFNKDLLLSAGDLIQGLPLSDTDKGKTI CCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCHHHEEECCHHHCCCCCCCCCCCHHH AKIAKYIGYDSVAIGNHEFDYGIRHILDLAAEGNKDEFSRKMPFISANVYRQPSEEELKN HHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCCEEECCCCCCCCHHHHHC LESTDERAIKPAEFKQGKRVFQPYIIKELENGLKVAVIGLTTPDTKITSHPKNSFVEFTD CCCCHHHCCCCHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEECC PVPETQKVIKEIQEKDPSISFIIATTHLGVGRTEHKTSDYLAEQTGNGLDLVIDGHSHTK CCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCE IEIHKPKEDKKVWVTQTEAYAKWLGDIDLVFDTETGEIVKIVQSLRDINQINIVTRDLSE EEEECCCCCCEEEEEEHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCHHEEEHHHHHH HYIKKLHKVYDVENDVKVFNSPGVFEHVQSIEINKTPYIGRVKPTSLGVMTADAIAWEYA HHHHHHHHHHCCCCCCEEECCCCHHHHHHHEECCCCCCCCCCCCCCCCEEEHHHHHHHHH KSSKEQVQSTKNEIATLDNSLGLINGGSLRTDLKSGEIKRGDVLGVSPFGNRIVTIKLKG HHHHHHHHHHHHHHHHHCCCCCEEECCCEEECCCCCCCCCCCEEEECCCCCEEEEEEECC DTLKKTLEYGLSMGKQGAFAQLSSNISYKVKVEKGTDPKTKIESWVKPDTTSFKINNKPI HHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCCCEEEECCCCC DDNKFYYLSTNDYLSAGGDGYQMLNLGKNRDIEKVYEGVQYIDSLIKYGQYLDKLTKDSS CCCCEEEEECCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QKDLFAHTFQEYLSSDFTKNQQVEIPQEALTKS HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MFHTNDEHGRLEYDDNKHNNYSGMDKTGQYLKKFNKDLLLSAGDLIQGLPLSDTDKGKTI CCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCHHHEEECCHHHCCCCCCCCCCCHHH AKIAKYIGYDSVAIGNHEFDYGIRHILDLAAEGNKDEFSRKMPFISANVYRQPSEEELKN HHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCCEEECCCCCCCCHHHHHC LESTDERAIKPAEFKQGKRVFQPYIIKELENGLKVAVIGLTTPDTKITSHPKNSFVEFTD CCCCHHHCCCCHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEECC PVPETQKVIKEIQEKDPSISFIIATTHLGVGRTEHKTSDYLAEQTGNGLDLVIDGHSHTK CCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCE IEIHKPKEDKKVWVTQTEAYAKWLGDIDLVFDTETGEIVKIVQSLRDINQINIVTRDLSE EEEECCCCCCEEEEEEHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCHHEEEHHHHHH HYIKKLHKVYDVENDVKVFNSPGVFEHVQSIEINKTPYIGRVKPTSLGVMTADAIAWEYA HHHHHHHHHHCCCCCCEEECCCCHHHHHHHEECCCCCCCCCCCCCCCCEEEHHHHHHHHH KSSKEQVQSTKNEIATLDNSLGLINGGSLRTDLKSGEIKRGDVLGVSPFGNRIVTIKLKG HHHHHHHHHHHHHHHHHCCCCCEEECCCEEECCCCCCCCCCCEEEECCCCCEEEEEEECC DTLKKTLEYGLSMGKQGAFAQLSSNISYKVKVEKGTDPKTKIESWVKPDTTSFKINNKPI HHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCCCEEEECCCCC DDNKFYYLSTNDYLSAGGDGYQMLNLGKNRDIEKVYEGVQYIDSLIKYGQYLDKLTKDSS CCCCEEEEECCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QKDLFAHTFQEYLSSDFTKNQQVEIPQEALTKS HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969503; 9384377 [H]