| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
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The map label for this gene is dam [H]
Identifier: 71893972
GI number: 71893972
Start: 815173
End: 816822
Strand: Reverse
Name: dam [H]
Synonym: MHJ_0623
Alternate gene names: 71893972
Gene position: 816822-815173 (Counterclockwise)
Preceding gene: 71893975
Following gene: 161611217
Centisome position: 91.02
GC content: 23.27
Gene sequence:
>1650_bases ATGTCAAAATCTGAATTAAAGCCTTTTGTAAAATGGGTTGGTGGGAAAACTCAGTTAATTAATGTAATTTTGTCTTTGCT TCCCAAAAATTTTAATTCATATATCGAGCCTTTTTTAGGTGGTGGAGCTTTATTTTTAAAATTACAACCTGAAAATGCTA TTGTTAATGATATAAATTCCGAATTAGTTAATTCCTGGAAGCAAATCAAAATTAATTTAGATACTTTAACAAAGCAGTTA GAAATTTATAAAAGTCTTCATTCTAAGGAGTTTTTTTACAAATTAAGGTCTGAAATTCCTGAAAATAGCATAAAAAAAGC AGCCAGATTTATTTATTTAAATAAAACCTGTTTTAACGGATTATACCGTGTGAATTCCAAAGGCGAATTTAATGTGCCTT TTAATAATGCAGAAATTATAAATTCTACTATATTTGATTTTAAAAATTTAAATAATATTTCTTCATTTTTAAATGAAAAT TCTATAGAAATTTATAATAAAAATTATCTTGAAATTTTATCGCTAGCAAAAGAAAATGACTTTGTTTTTATAGACCCTCC GTATGATTCAGAAAACGATAATTCATTTACAAATTATGATAGAAATGGCTGGAAAAAACAAGATACATTGGAGCTTATTG ATACTTTAAAAAAATTAAATGCTAAAAAAGTTAAGTGAATGTTTACAAATCATTCTACCTCTTTAGTTTTAAATAATTTA AAAGAATTTAGTATTTTTCAAATACCGGTTAACAGATTCATAAATTCTAATAGCCAGGATAGAATTCTGGCTGCAAATGA GGTAATTATTATAAATTATAAGGTAGATGACGGCGCATTAATTAACTATGAATTTGAAGTATTTTTTAAGTCTCTAAGAA ATACTTCTTATATTTTAAAGGATTATGTTTCCTGAAATAAAATTAATAAAATAAGTCTTTCTTTAAAAGATTTAGAGATA TTTGAGAAATTAAAATCAGATAATATTTTTGATTTTAATATAAAACTAAGAAGTGTTTTTAAGGAAAATGTCTCTATTTT TCAGTATCTGCCTTTGTTTCTAGCTAAAAAAGTTCAAAAAAATTCTTCATTTTTTTATATAGATGATGCTTTTAATGAAA AAAAATTTCAATGAGATAATTTTAATTCTTTATACGAATTTCTAAACCTAACAGGTTTGGTCAATCAAATATTTATAAAT CCGGAAATCAAATCAATTTCTAATTATTTATTTGGAATCGAAGTAGGGTTATCAAGTAATGATAAAAAAAATAAAAGTGG TAAATTTATGGAATTTCAAGTGGAAAATTTATTAAAAAAATACCAAATTACTTATAAAAAGCAGGAAAAAATAACCGAAT TAAAAAAACTTTTTGATTTTGTTTTTATGCTAAATCAAAAAGTTTTTGTAGTTGAGACAAATTTTTTTAATTCTTCTGGG TCAAAATTTAATTCGGAAATTGAAAGATTTAAAGCTTTAGCAGAAAAAGCAAAAAAATTTAATTTTGAATTTATTTGAAT AACTGATGGTACAGGACTTCGTTTAGAGAAAGAAAAATTACGAAGTTTTTTCCATAATCATTTTCTTTTTAACTTATTTA CATTTGAATTATTTCTAAAATCAGAGATAGCAAAACAAAATAAGCTTTAA
Upstream 100 bases:
>100_bases GAAATTATTTACAGAAAACGTGGAATAATTTATGAAAATTTTCTTTTTTTCTGGGTTTTTTTAAATAATTTTATCTCTAT TTGCTTATATAATTTAGTTT
Downstream 100 bases:
>100_bases ATTTTTGTTTTAGTTTAATTATTCGGGCTTATTTTTGTGTATTTGAATTTGAATTATTAAATTTATAATCGGCCGGAATT TCTTTTACCCCGTTTTTAAA
Product: DNA adenine methylase
Products: NA
Alternate protein names: M.LlaDCHI A; M.LlaDCHIA; Adenine-specific methyltransferase LlaDCHIA; M.LlaII A [H]
Number of amino acids: Translated: 549; Mature: 548
Protein sequence:
>549_residues MSKSELKPFVKWVGGKTQLINVILSLLPKNFNSYIEPFLGGGALFLKLQPENAIVNDINSELVNSWKQIKINLDTLTKQL EIYKSLHSKEFFYKLRSEIPENSIKKAARFIYLNKTCFNGLYRVNSKGEFNVPFNNAEIINSTIFDFKNLNNISSFLNEN SIEIYNKNYLEILSLAKENDFVFIDPPYDSENDNSFTNYDRNGWKKQDTLELIDTLKKLNAKKVKWMFTNHSTSLVLNNL KEFSIFQIPVNRFINSNSQDRILAANEVIIINYKVDDGALINYEFEVFFKSLRNTSYILKDYVSWNKINKISLSLKDLEI FEKLKSDNIFDFNIKLRSVFKENVSIFQYLPLFLAKKVQKNSSFFYIDDAFNEKKFQWDNFNSLYEFLNLTGLVNQIFIN PEIKSISNYLFGIEVGLSSNDKKNKSGKFMEFQVENLLKKYQITYKKQEKITELKKLFDFVFMLNQKVFVVETNFFNSSG SKFNSEIERFKALAEKAKKFNFEFIWITDGTGLRLEKEKLRSFFHNHFLFNLFTFELFLKSEIAKQNKL
Sequences:
>Translated_549_residues MSKSELKPFVKWVGGKTQLINVILSLLPKNFNSYIEPFLGGGALFLKLQPENAIVNDINSELVNSWKQIKINLDTLTKQL EIYKSLHSKEFFYKLRSEIPENSIKKAARFIYLNKTCFNGLYRVNSKGEFNVPFNNAEIINSTIFDFKNLNNISSFLNEN SIEIYNKNYLEILSLAKENDFVFIDPPYDSENDNSFTNYDRNGWKKQDTLELIDTLKKLNAKKVK*MFTNHSTSLVLNNL KEFSIFQIPVNRFINSNSQDRILAANEVIIINYKVDDGALINYEFEVFFKSLRNTSYILKDYVS*NKINKISLSLKDLEI FEKLKSDNIFDFNIKLRSVFKENVSIFQYLPLFLAKKVQKNSSFFYIDDAFNEKKFQ*DNFNSLYEFLNLTGLVNQIFIN PEIKSISNYLFGIEVGLSSNDKKNKSGKFMEFQVENLLKKYQITYKKQEKITELKKLFDFVFMLNQKVFVVETNFFNSSG SKFNSEIERFKALAEKAKKFNFEFI*ITDGTGLRLEKEKLRSFFHNHFLFNLFTFELFLKSEIAKQNKL >Mature_548_residues SKSELKPFVKWVGGKTQLINVILSLLPKNFNSYIEPFLGGGALFLKLQPENAIVNDINSELVNSWKQIKINLDTLTKQLE IYKSLHSKEFFYKLRSEIPENSIKKAARFIYLNKTCFNGLYRVNSKGEFNVPFNNAEIINSTIFDFKNLNNISSFLNENS IEIYNKNYLEILSLAKENDFVFIDPPYDSENDNSFTNYDRNGWKKQDTLELIDTLKKLNAKKVK*MFTNHSTSLVLNNLK EFSIFQIPVNRFINSNSQDRILAANEVIIINYKVDDGALINYEFEVFFKSLRNTSYILKDYVS*NKINKISLSLKDLEIF EKLKSDNIFDFNIKLRSVFKENVSIFQYLPLFLAKKVQKNSSFFYIDDAFNEKKFQ*DNFNSLYEFLNLTGLVNQIFINP EIKSISNYLFGIEVGLSSNDKKNKSGKFMEFQVENLLKKYQITYKKQEKITELKKLFDFVFMLNQKVFVVETNFFNSSGS KFNSEIERFKALAEKAKKFNFEFI*ITDGTGLRLEKEKLRSFFHNHFLFNLFTFELFLKSEIAKQNKL
Specific function: This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the LlaDCHI endonuclease [H]
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789789, Length=263, Percent_Identity=28.1368821292776, Blast_Score=110, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 63827; Mature: 63696
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSELKPFVKWVGGKTQLINVILSLLPKNFNSYIEPFLGGGALFLKLQPENAIVNDINS CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHH ELVNSWKQIKINLDTLTKQLEIYKSLHSKEFFYKLRSEIPENSIKKAARFIYLNKTCFNG HHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEHHHHCC LYRVNSKGEFNVPFNNAEIINSTIFDFKNLNNISSFLNENSIEIYNKNYLEILSLAKEND EEEECCCCEEECCCCCHHHHHHHHHHHHCHHHHHHHHCCCCEEEECCCHHHHHHHHCCCC FVFIDPPYDSENDNSFTNYDRNGWKKQDTLELIDTLKKLNAKKVKMFTNHSTSLVLNNLK EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCH EFSIFQIPVNRFINSNSQDRILAANEVIIINYKVDDGALINYEFEVFFKSLRNTSYILKD HCEEEEEEHHHHCCCCCCCCEEEECCEEEEEEEECCCEEEEEHHHHHHHHHCCCHHHHHH YVSNKINKISLSLKDLEIFEKLKSDNIFDFNIKLRSVFKENVSIFQYLPLFLAKKVQKNS HHCCCCEEEEEEHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SFFYIDDAFNEKKFQDNFNSLYEFLNLTGLVNQIFINPEIKSISNYLFGIEVGLSSNDKK CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHEEEEEEECCCCCCCC NKSGKFMEFQVENLLKKYQITYKKQEKITELKKLFDFVFMLNQKVFVVETNFFNSSGSKF CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHH NSEIERFKALAEKAKKFNFEFIITDGTGLRLEKEKLRSFFHNHFLFNLFTFELFLKSEIA HHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQNKL HCCCC >Mature Secondary Structure SKSELKPFVKWVGGKTQLINVILSLLPKNFNSYIEPFLGGGALFLKLQPENAIVNDINS CHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHH ELVNSWKQIKINLDTLTKQLEIYKSLHSKEFFYKLRSEIPENSIKKAARFIYLNKTCFNG HHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEHHHHCC LYRVNSKGEFNVPFNNAEIINSTIFDFKNLNNISSFLNENSIEIYNKNYLEILSLAKEND EEEECCCCEEECCCCCHHHHHHHHHHHHCHHHHHHHHCCCCEEEECCCHHHHHHHHCCCC FVFIDPPYDSENDNSFTNYDRNGWKKQDTLELIDTLKKLNAKKVKMFTNHSTSLVLNNLK EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCH EFSIFQIPVNRFINSNSQDRILAANEVIIINYKVDDGALINYEFEVFFKSLRNTSYILKD HCEEEEEEHHHHCCCCCCCCEEEECCEEEEEEEECCCEEEEEHHHHHHHHHCCCHHHHHH YVSNKINKISLSLKDLEIFEKLKSDNIFDFNIKLRSVFKENVSIFQYLPLFLAKKVQKNS HHCCCCEEEEEEHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SFFYIDDAFNEKKFQDNFNSLYEFLNLTGLVNQIFINPEIKSISNYLFGIEVGLSSNDKK CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHEEEEEEECCCCCCCC NKSGKFMEFQVENLLKKYQITYKKQEKITELKKLFDFVFMLNQKVFVVETNFFNSSGSKF CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHH NSEIERFKALAEKAKKFNFEFIITDGTGLRLEKEKLRSFFHNHFLFNLFTFELFLKSEIA HHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQNKL HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7793939; 11467810 [H]