Click here to switch to the map view.

The map label for this gene is ytfM

Identifier: 71892399

GI number: 71892399

Start: 106992

End: 107185

Strand: Direct

Name: ytfM

Synonym: BPEN_092

Alternate gene names: NA

Gene position: 106992-107185 (Clockwise)

Preceding gene: 71891877

Following gene: 71891878

Centisome position: 13.51

GC content: 20.62

Gene sequence:

>1763_bases
ATGTTTAAGGATCTTAAAAAGTATATGATAATACGGTTGCATTTAATAATATATTTTTTTATGCCACTGATATGTAATAG
TAGCATTAATTTACAAGTAGAAGGATTAAATAGTGAATTAGATTATAATGTACGTCAAAAATTATTAAATATACATACTA
ATGTAAAGTATGTAGATTCAGATTTAAAAAAAAAATAGACAATGCAATTAGAACTGGACTACGCCCACTAGGTTATTACG
CCCCTACATTGATTTTTTTTCCACTTAAGTCTTTGAATAAAAATTCTGATCTATTAGTTATTAAAGTTGAACCTGGGGAT
CCAGTTGTAGTTACTGAAGTAAATGTCGTTATACGAGGAGATGGTGTAAAGGACGTTGATTACCAGAAAATAATAAAAGA
TAGCAAATCTTTTATTGGGAAAAGATTGAATCATAATGATTACGAACAATTTAAAAATAAACTATATAACTTAGCTTTAT
GTAAAGGATATTTTGATGCCAAGTTCCAAAGTAGTCAACTTATTGTCATTCCTTCTCGCTGTCAGAGCATTTGGAACATA
GATTTTTATAGTGGTCAGCGTTATGTTTTTGAAAGAATTAAATTTCATGGTAGTCAAATTAAAGAAGATTATTTAAAAAA
TATATCCAACATACGATCGGGAGAATATTACAGTGCTACATCCGTTATGGAATTAAATCGCCGATTTAATTACACTAATT
GGTTTGAATCAGTATCGATTTCTTCAGATTATATGCGTTTTCAACAAAAAAAAAAAATAATATTAGATATTTTTCTTTAT
CCTTGTGCAAAAAATAATTTTGCAACCGGATCTGGTTATACTATCGATACAGGCCCTAGAACTAAAATCATTTGGAAAAA
ACCGTGGATTAATGCATATGGACATAGTTTAGAAACTAACTGTAGTTTATCTAAGCCAGAACAAGCTTTTGATTTAAGTT
ATAAAGTTCCACTGTTTTCTAATCCATTAGAAGAATATTATTTATTGCAAGGAGGGTTGATACATGAAGATACACATAAT
GTTCAGTCTAGTGTTACGACTATAAATATAGCTCGTTATTGGAATTGTTCCCATAAATGGCAACGTTCAATTAATGTGCA
TTGGCACTTTAATCATTGTTCTAATAATTATATCATTAAAAATATAATGTTAATTTATCCAGGGATAAATATATCTCGTA
TTCGAAAACGTGGAGATATAATACCGTATTGGGGAGATAGTCAGCGTTACTCAATCAATATATCTAATAATTGTTGGAAA
TCGGATGTTAATTTCATTGCTGTGCAAGTTCAAAATATTTGGGTTAGGACGTTATTAAAAAAACATCGTATTTTGGCTCG
TGGAAACTTAAGTTGGATAGATACCAACAATTTTTCATCTGTTGATTTAATGTTGCGATTTTTTTCCAATGTAAATAATG
GTATCCGTGGATACAAATATAAATCTTTATATCCTTATGATAATTCTGAATCTTTTGTAGGTATTGCTACTAAACTTATT
ACTACTACGTTTGAATATCAATATAATGTAATTAATAAATGGTGGGGAGCTATTTTTATAGATGCAGGAGAGATTACCAA
TGATATCAAATGGAATAGTTTTAAATCTGGTATAGGTATTGGAGTGCGCTGGCAATTACCAATAGGTCCTATAAAATTGG
ACGTAGCGACTCCATTAATTCATAAAGGCAAGATAAATCATCATTTTTTATATTTATACGTCAGTTTAGGACCAGATTTA
TGA

Upstream 100 bases:

>100_bases
ATATATTATGTTTTTACAGGGTTTAAATATAAATATAGTGTATTAATGGAGTATGAAAATTACTTTATTTAAAGCTTTGA
TATAGTCAAGGATTCGATAT

Downstream 100 bases:

>100_bases
TTTTTGTAAAAAAAATCTGTGTTATTTTTTTATTATGGATATCAATAATATGTGGATTTTTTGTGTTTTTATTAGGTACT
AATATAGGAACATATTTAAT

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>587_residues
MFKDLKKYMIIRLHLIIYFFMPLICNSSINLQVEGLNSELDYNVRQKLLNIHTNVKYVDSDLKKKIDNAIRTGLRPLGYY
APTLIFFPLKSLNKNSDLLVIKVEPGDPVVVTEVNVVIRGDGVKDVDYQKIIKDSKSFIGKRLNHNDYEQFKNKLYNLAL
CKGYFDAKFQSSQLIVIPSRCQSIWNIDFYSGQRYVFERIKFHGSQIKEDYLKNISNIRSGEYYSATSVMELNRRFNYTN
WFESVSISSDYMRFQQKKKIILDIFLYPCAKNNFATGSGYTIDTGPRTKIIWKKPWINAYGHSLETNCSLSKPEQAFDLS
YKVPLFSNPLEEYYLLQGGLIHEDTHNVQSSVTTINIARYWNCSHKWQRSINVHWHFNHCSNNYIIKNIMLIYPGINISR
IRKRGDIIPYWGDSQRYSINISNNCWKSDVNFIAVQVQNIWVRTLLKKHRILARGNLSWIDTNNFSSVDLMLRFFSNVNN
GIRGYKYKSLYPYDNSESFVGIATKLITTTFEYQYNVINKWWGAIFIDAGEITNDIKWNSFKSGIGIGVRWQLPIGPIKL
DVATPLIHKGKINHHFLYLYVSLGPDL

Sequences:

>Translated_64_residues
MFKDLKKYMIIRLHLIIYFFMPLICNSSINLQVEGLNSELDYNVRQKLLNIHTNVKYVDSDLKK
>Mature_64_residues
MFKDLKKYMIIRLHLIIYFFMPLICNSSINLQVEGLNSELDYNVRQKLLNIHTNVKYVDSDLKK

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7676; Mature: 7676

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKDLKKYMIIRLHLIIYFFMPLICNSSINLQVEGLNSELDYNVRQKLLNIHTNVKYVDS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEECCC
DLKK
CCCC
>Mature Secondary Structure
MFKDLKKYMIIRLHLIIYFFMPLICNSSINLQVEGLNSELDYNVRQKLLNIHTNVKYVDS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEECCC
DLKK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA