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The map label for this gene is clpX [H]

Identifier: 71892028

GI number: 71892028

Start: 288183

End: 289442

Strand: Direct

Name: clpX [H]

Synonym: BPEN_254

Alternate gene names: 71892028

Gene position: 288183-289442 (Clockwise)

Preceding gene: 71892027

Following gene: 71892034

Centisome position: 36.4

GC content: 30.95

Gene sequence:

>1260_bases
GTGAGCGATGATCATCAAAATCATTCAAAAAATAGTACATTATGTTGTTCATTTTGCGGGAAAGACCAAAATCAAGTATT
AAAATTAATTGCTGGATTATCAGCACATATTTGCGATACATGTGTTGGTTTATGTAAAGATATAATTAGTCAAGAAAATA
AAGGTAAAATAATTAACGAAAAATTGACCAAATATCCTACCCCTTGTGAAATTAAGAATTACTTGGACGATTATGTGATT
GGACAAGAATACACTAAAAAAGTACTTGCAGTAGCAGTATATAATCATTACAAACGTTTACGTAATGAAAAGACGTGTAT
AAACAGCAATGGTACAAAATTGTTTAAAAGTAACATTTTATTGATCGGCCCTACAGGGAGTGGCAAAACATTATTAGCAG
AAACATTAGCTCGGTTTCTTAATGTACCATTTTCTATATCAGATGCTACTACTTTGACAGAAGCGGGGTATGTAGGTGAA
GATGTAGAAAACGTTGTACAAAAGTTATTACAACGATGTAATTATGATGTAAATAAAGCGCAACAAGGAATCATTTATAT
AGATGAAATAGACAAAATTTCTAGAAAATCAGAAAATCCTTCTATTACTCGAGATGTTTCCGGAGAAGGAGTACAACAAG
CTTTATTAAAATTGATTGAAGGGACTACAGCTGCGGTACCACCACAAGGAGGTCGTAAACATCCTCAGCAAGAATTTATA
CAAGTGGATACTACTAATATTCTTTTTATTTGTGGTGGTGCTTTTTTTGGTTTGAATCAAATTATCCAGCAACGCACTAC
TAACAAACGTACAATTGGGTTTCGAGTTTTAGAAAACAACGATACAACAAAAAACATTGAGCATTCATTATTAACACAAA
TTGAGCCAGAAGATTTAATTAAATTTGGTTTAATTCCAGAATTTGTTGGTCGACTTCCCATAGTTTCTACTTTAGATGAA
CTGAAGGAAAAAGAATTAATTAAAATCTTAAAAGAACCAAAGAATGCTTTAATAAAACAATATGAAATGTTATTTCATAT
TGATGGAGTAAAATTGGAATTTTCCGAAACATCATTGACTGCTATTGCTAAAAATGCTATGAAAAAAAAAATTGGTGCTC
GTGGACTTAGAGCTATTTTAGAGAATATATTGCTAGATGTAATGTATGAATTACCTTCAAAAAACAATATAGATAAAATA
ATAATTGACGAATCAGTAGTATTTGGGCTCTCAAAACCATTGTTAATCCACAGTCAGTAA

Upstream 100 bases:

>100_bases
TGATCTGTAATAAAATTTATGTCTGAATTTGTTATTTATATCTCAAGTAATTTATAGATTGCTTTAAATGAATTAAACGT
AAACGGAAGGATATCAGACT

Downstream 100 bases:

>100_bases
CCATAAAAACTAATTAAACGTAAATGCGCGTTCATTGAATAATGGCTACATGTGATATTGTCGTAAATTGAGAATAAAAA
TTTGTTATTGTCATAACAAA

Product: ATP-dependent protease ATP-binding subunit ClpX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSDDHQNHSKNSTLCCSFCGKDQNQVLKLIAGLSAHICDTCVGLCKDIISQENKGKIINEKLTKYPTPCEIKNYLDDYVI
GQEYTKKVLAVAVYNHYKRLRNEKTCINSNGTKLFKSNILLIGPTGSGKTLLAETLARFLNVPFSISDATTLTEAGYVGE
DVENVVQKLLQRCNYDVNKAQQGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTTAAVPPQGGRKHPQQEFI
QVDTTNILFICGGAFFGLNQIIQQRTTNKRTIGFRVLENNDTTKNIEHSLLTQIEPEDLIKFGLIPEFVGRLPIVSTLDE
LKEKELIKILKEPKNALIKQYEMLFHIDGVKLEFSETSLTAIAKNAMKKKIGARGLRAILENILLDVMYELPSKNNIDKI
IIDESVVFGLSKPLLIHSQ

Sequences:

>Translated_419_residues
MSDDHQNHSKNSTLCCSFCGKDQNQVLKLIAGLSAHICDTCVGLCKDIISQENKGKIINEKLTKYPTPCEIKNYLDDYVI
GQEYTKKVLAVAVYNHYKRLRNEKTCINSNGTKLFKSNILLIGPTGSGKTLLAETLARFLNVPFSISDATTLTEAGYVGE
DVENVVQKLLQRCNYDVNKAQQGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTTAAVPPQGGRKHPQQEFI
QVDTTNILFICGGAFFGLNQIIQQRTTNKRTIGFRVLENNDTTKNIEHSLLTQIEPEDLIKFGLIPEFVGRLPIVSTLDE
LKEKELIKILKEPKNALIKQYEMLFHIDGVKLEFSETSLTAIAKNAMKKKIGARGLRAILENILLDVMYELPSKNNIDKI
IIDESVVFGLSKPLLIHSQ
>Mature_418_residues
SDDHQNHSKNSTLCCSFCGKDQNQVLKLIAGLSAHICDTCVGLCKDIISQENKGKIINEKLTKYPTPCEIKNYLDDYVIG
QEYTKKVLAVAVYNHYKRLRNEKTCINSNGTKLFKSNILLIGPTGSGKTLLAETLARFLNVPFSISDATTLTEAGYVGED
VENVVQKLLQRCNYDVNKAQQGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTTAAVPPQGGRKHPQQEFIQ
VDTTNILFICGGAFFGLNQIIQQRTTNKRTIGFRVLENNDTTKNIEHSLLTQIEPEDLIKFGLIPEFVGRLPIVSTLDEL
KEKELIKILKEPKNALIKQYEMLFHIDGVKLEFSETSLTAIAKNAMKKKIGARGLRAILENILLDVMYELPSKNNIDKII
IDESVVFGLSKPLLIHSQ

Specific function: ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP [H]

COG id: COG1219

COG function: function code O; ATP-dependent protease Clp, ATPase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpX chaperone family [H]

Homologues:

Organism=Homo sapiens, GI7242140, Length=329, Percent_Identity=51.3677811550152, Blast_Score=305, Evalue=6e-83,
Organism=Escherichia coli, GI1786642, Length=419, Percent_Identity=67.7804295942721, Blast_Score=579, Evalue=1e-167,
Organism=Escherichia coli, GI1790366, Length=104, Percent_Identity=41.3461538461538, Blast_Score=86, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71982908, Length=309, Percent_Identity=43.6893203883495, Blast_Score=259, Evalue=1e-69,
Organism=Caenorhabditis elegans, GI71982905, Length=309, Percent_Identity=43.6893203883495, Blast_Score=258, Evalue=3e-69,
Organism=Caenorhabditis elegans, GI71988663, Length=394, Percent_Identity=37.8172588832487, Blast_Score=237, Evalue=8e-63,
Organism=Caenorhabditis elegans, GI71988660, Length=254, Percent_Identity=39.7637795275591, Blast_Score=161, Evalue=5e-40,
Organism=Saccharomyces cerevisiae, GI6319704, Length=439, Percent_Identity=39.8633257403189, Blast_Score=286, Evalue=3e-78,
Organism=Drosophila melanogaster, GI24648289, Length=321, Percent_Identity=45.1713395638629, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI24648291, Length=321, Percent_Identity=45.1713395638629, Blast_Score=280, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR019489
- InterPro:   IPR004487
- InterPro:   IPR010603 [H]

Pfam domain/function: PF07724 AAA_2; PF10431 ClpB_D2-small; PF06689 zf-C4_ClpX [H]

EC number: NA

Molecular weight: Translated: 46824; Mature: 46693

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDHQNHSKNSTLCCSFCGKDQNQVLKLIAGLSAHICDTCVGLCKDIISQENKGKIINE
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
KLTKYPTPCEIKNYLDDYVIGQEYTKKVLAVAVYNHYKRLRNEKTCINSNGTKLFKSNIL
HHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCEE
LIGPTGSGKTLLAETLARFLNVPFSISDATTLTEAGYVGEDVENVVQKLLQRCNYDVNKA
EEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHH
QQGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTTAAVPPQGGRKHPQQEFI
CCCEEEEECHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHE
QVDTTNILFICGGAFFGLNQIIQQRTTNKRTIGFRVLENNDTTKNIEHSLLTQIEPEDLI
EECCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCCHHHHH
KFGLIPEFVGRLPIVSTLDELKEKELIKILKEPKNALIKQYEMLFHIDGVKLEFSETSLT
HHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCHHHH
AIAKNAMKKKIGARGLRAILENILLDVMYELPSKNNIDKIIIDESVVFGLSKPLLIHSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHCCCCCEEEECC
>Mature Secondary Structure 
SDDHQNHSKNSTLCCSFCGKDQNQVLKLIAGLSAHICDTCVGLCKDIISQENKGKIINE
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
KLTKYPTPCEIKNYLDDYVIGQEYTKKVLAVAVYNHYKRLRNEKTCINSNGTKLFKSNIL
HHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCEE
LIGPTGSGKTLLAETLARFLNVPFSISDATTLTEAGYVGEDVENVVQKLLQRCNYDVNKA
EEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHH
QQGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTTAAVPPQGGRKHPQQEFI
CCCEEEEECHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHE
QVDTTNILFICGGAFFGLNQIIQQRTTNKRTIGFRVLENNDTTKNIEHSLLTQIEPEDLI
EECCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCCHHHHH
KFGLIPEFVGRLPIVSTLDELKEKELIKILKEPKNALIKQYEMLFHIDGVKLEFSETSLT
HHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCHHHH
AIAKNAMKKKIGARGLRAILENILLDVMYELPSKNNIDKIIIDESVVFGLSKPLLIHSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA