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The map label for this gene is yraL [H]

Identifier: 71891844

GI number: 71891844

Start: 64871

End: 65764

Strand: Direct

Name: yraL [H]

Synonym: BPEN_053

Alternate gene names: 71891844

Gene position: 64871-65764 (Clockwise)

Preceding gene: 71891842

Following gene: 71891845

Centisome position: 8.19

GC content: 32.89

Gene sequence:

>894_bases
GTGAAGAATATGCTGCCATCAATACCCAATTTTGTATCTGCGTTGTATATAGTGCCGACTCCTATTGGAAATTTACAAGA
CATTACGTATCGGGCTTTATCAGTGTTACGTCAAGTAGACTGTATTGCAGCAGAGGATACACGTCGTACTCGTATATTGT
TAGATTTTTTTTCTATTCATACATCTTTATATATATTACATCAGCACAATGAATACAAAAGAATACCAATGTTAATCTCA
AAACTACAAAGAGGATTGAGTATCGCTTTGGTTTCCGATGCGGGTACTCCATTGATTAATGATCCAGGATATTGTTTAGT
GCAATCTTGTCAGAAATTAAAAATTCGAGTTATTCCTTTGCCTGGTCCATGTGCTGCTATTACTGCATTGTGTGGATCTG
GTTTACCATCGGATCGTTTTTGTTTTGAAGGATTTTTACCACATAAACATAAATTACGCATAGATCGTTTACGAGATTTA
TCAGAAGAATCACGTACATTAATTTTTTATGATGTAAAACATCGTATAATAGATACTTTAAAAGACATGGTTAGTGTTTT
TGGGTTAGATCGTTATGTTGTGTTAGCTCGAGAATTAACTAAAATATGGGAATCTATTTATGGGGCTCCTGTTGGTCAAT
TATTATCTTGGGTACAAAAAGATCATTTCCGGATTCAAGGTGAAATAGTTTTAGTTGTAGCAGGAAATTGTTTGAAAAAG
AATGAATTGTCTCCAAAAATACTTCGGGTCATGCGATTATTAGCATCTGAATTACCTGTAAAAAGAGCTGCAATTTTAGC
AGGATATATATATGGTGTGCAAAAGAATATGCTTTATAAGCAGTATATAGATGAAAAATTAAATAAAATTAATGGATTAG
ATGTTATTGATTGA

Upstream 100 bases:

>100_bases
TTAGAATGATAAATTAGTATGTTGAAGTTTTAATAAAGAATGTGCAAATATTTTTTGTTTATTTGATAAGTATGAGATCT
ATTGTAGTAGATATTGATAT

Downstream 100 bases:

>100_bases
TGACATAGTATAGAAAGAATGGTTATAATATTTTGAGGAGTTAACTAGACAATCGCTGCTTTTTTGTGTTTACAAGTGAT
TATATAGTTGTTGTAATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKNMLPSIPNFVSALYIVPTPIGNLQDITYRALSVLRQVDCIAAEDTRRTRILLDFFSIHTSLYILHQHNEYKRIPMLIS
KLQRGLSIALVSDAGTPLINDPGYCLVQSCQKLKIRVIPLPGPCAAITALCGSGLPSDRFCFEGFLPHKHKLRIDRLRDL
SEESRTLIFYDVKHRIIDTLKDMVSVFGLDRYVVLARELTKIWESIYGAPVGQLLSWVQKDHFRIQGEIVLVVAGNCLKK
NELSPKILRVMRLLASELPVKRAAILAGYIYGVQKNMLYKQYIDEKLNKINGLDVID

Sequences:

>Translated_297_residues
MKNMLPSIPNFVSALYIVPTPIGNLQDITYRALSVLRQVDCIAAEDTRRTRILLDFFSIHTSLYILHQHNEYKRIPMLIS
KLQRGLSIALVSDAGTPLINDPGYCLVQSCQKLKIRVIPLPGPCAAITALCGSGLPSDRFCFEGFLPHKHKLRIDRLRDL
SEESRTLIFYDVKHRIIDTLKDMVSVFGLDRYVVLARELTKIWESIYGAPVGQLLSWVQKDHFRIQGEIVLVVAGNCLKK
NELSPKILRVMRLLASELPVKRAAILAGYIYGVQKNMLYKQYIDEKLNKINGLDVID
>Mature_297_residues
MKNMLPSIPNFVSALYIVPTPIGNLQDITYRALSVLRQVDCIAAEDTRRTRILLDFFSIHTSLYILHQHNEYKRIPMLIS
KLQRGLSIALVSDAGTPLINDPGYCLVQSCQKLKIRVIPLPGPCAAITALCGSGLPSDRFCFEGFLPHKHKLRIDRLRDL
SEESRTLIFYDVKHRIIDTLKDMVSVFGLDRYVVLARELTKIWESIYGAPVGQLLSWVQKDHFRIQGEIVLVVAGNCLKK
NELSPKILRVMRLLASELPVKRAAILAGYIYGVQKNMLYKQYIDEKLNKINGLDVID

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=280, Percent_Identity=59.2857142857143, Blast_Score=337, Evalue=7e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 33717; Mature: 33717

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNMLPSIPNFVSALYIVPTPIGNLQDITYRALSVLRQVDCIAAEDTRRTRILLDFFSIH
CCCCCCCHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TSLYILHQHNEYKRIPMLISKLQRGLSIALVSDAGTPLINDPGYCLVQSCQKLKIRVIPL
HEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHCCEEEEEEC
PGPCAAITALCGSGLPSDRFCFEGFLPHKHKLRIDRLRDLSEESRTLIFYDVKHRIIDTL
CCHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCCHHCCCEEEEEHHHHHHHHHH
KDMVSVFGLDRYVVLARELTKIWESIYGAPVGQLLSWVQKDHFRIQGEIVLVVAGNCLKK
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEECEEEEEEECCCCCC
NELSPKILRVMRLLASELPVKRAAILAGYIYGVQKNMLYKQYIDEKLNKINGLDVID
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKNMLPSIPNFVSALYIVPTPIGNLQDITYRALSVLRQVDCIAAEDTRRTRILLDFFSIH
CCCCCCCHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TSLYILHQHNEYKRIPMLISKLQRGLSIALVSDAGTPLINDPGYCLVQSCQKLKIRVIPL
HEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHCCEEEEEEC
PGPCAAITALCGSGLPSDRFCFEGFLPHKHKLRIDRLRDLSEESRTLIFYDVKHRIIDTL
CCHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCCHHCCCEEEEEHHHHHHHHHH
KDMVSVFGLDRYVVLARELTKIWESIYGAPVGQLLSWVQKDHFRIQGEIVLVVAGNCLKK
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEECEEEEEEECCCCCC
NELSPKILRVMRLLASELPVKRAAILAGYIYGVQKNMLYKQYIDEKLNKINGLDVID
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]