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The map label for this gene is yrbA [H]

Identifier: 71891837

GI number: 71891837

Start: 56953

End: 57222

Strand: Direct

Name: yrbA [H]

Synonym: BPEN_046

Alternate gene names: 71891837

Gene position: 56953-57222 (Clockwise)

Preceding gene: 71891833

Following gene: 71891838

Centisome position: 7.19

GC content: 28.15

Gene sequence:

>270_bases
ATGGTGGACATTATGGACGTGGATGATATTAAAAGTATTTTATTAAAAAATTTGGTATTAGATGAAGCATATGTCTCTTT
ATATAAGGATAATTATCAAATTATTGCTGTAAGTCATATTTTTTATGATGGTATGACTGAATTAGAACGGCATAAAATTA
TATATGCTCCTCTTATGAAGTATATATTAAATAATGAAATTCATTCAATATCTATTCAAGCATTTAATCCTCAGGAATGG
AACAAAAAGCGTGGATTATGCGGGGTGTGA

Upstream 100 bases:

>100_bases
GATTGATATTTTGAAATAAAAACAACAATAGAATAATAATTCTATGGCATAAAAATATGAGAACATAATTCTGCGTTTTG
CTGTTATTATAATTATTCAA

Downstream 100 bases:

>100_bases
AGTAATTTTTAAATTAATATGAATTAATTATAATGATTGATATTAGGTCATGACAGTGGATAGATTTTATATTCATGGTC
CTACTCCTTTAAGTGGTGAA

Product: BolA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MVDIMDVDDIKSILLKNLVLDEAYVSLYKDNYQIIAVSHIFYDGMTELERHKIIYAPLMKYILNNEIHSISIQAFNPQEW
NKKRGLCGV

Sequences:

>Translated_89_residues
MVDIMDVDDIKSILLKNLVLDEAYVSLYKDNYQIIAVSHIFYDGMTELERHKIIYAPLMKYILNNEIHSISIQAFNPQEW
NKKRGLCGV
>Mature_89_residues
MVDIMDVDDIKSILLKNLVLDEAYVSLYKDNYQIIAVSHIFYDGMTELERHKIIYAPLMKYILNNEIHSISIQAFNPQEW
NKKRGLCGV

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

Organism=Escherichia coli, GI87082226, Length=84, Percent_Identity=41.6666666666667, Blast_Score=81, Evalue=1e-17,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 10404; Mature: 10404

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDIMDVDDIKSILLKNLVLDEAYVSLYKDNYQIIAVSHIFYDGMTELERHKIIYAPLMK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHCCHHHHHHHEEHHHHHHH
YILNNEIHSISIQAFNPQEWNKKRGLCGV
HHHCCCCEEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MVDIMDVDDIKSILLKNLVLDEAYVSLYKDNYQIIAVSHIFYDGMTELERHKIIYAPLMK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHCCHHHHHHHEEHHHHHHH
YILNNEIHSISIQAFNPQEWNKKRGLCGV
HHHCCCCEEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]