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The map label for this gene is yhbN [H]

Identifier: 71891835

GI number: 71891835

Start: 53277

End: 53786

Strand: Reverse

Name: yhbN [H]

Synonym: BPEN_044

Alternate gene names: 71891835

Gene position: 53786-53277 (Counterclockwise)

Preceding gene: 71891836

Following gene: 71891834

Centisome position: 6.79

GC content: 26.27

Gene sequence:

>510_bases
ATGAAATCCAACGCATATGGTAAATACAAAATAATACTTACTTATATCAATATACTTTTAGCGTTTACATATTCTCATGC
TTTAGCATACAAAAAATCACAAATACTTCAAATATATTCTGAATGTCAATCAATTAATATGTTGACTAATACAATAATCT
TTACAGATCGAGTTATGCTTAAATATAAAAACATTGATCTTTACGCAGATAAAATATTAATCTCTCATACAGAAGATACA
CATCATCTATCCATGATAGAAGCACACGGAAATCCTGTTACTTTAAATCAAACACAAAAAATGGGAAATATGATATTTGC
TCAATCATCGATAATACATTACAATACCAGCGATGACACTATTACTCTAATTGGTAATGCTTATATAAAACAATCAGGAA
ATTCTATACAAAGTGATAAGATCATATACTCAATAAAAAACAAACAAATAAAAGCCATTTCCAACCAAGGAAATAAAGTT
ATAACAATTTTATCAAAAAAATCCATCTAA

Upstream 100 bases:

>100_bases
GTAATTATACATGGTCATTATTTTTATTCTATTGGGATGAAAATACATGCCAATTTACATACACAAACGGCAAAATTAAT
TGATAACGTACAAACTTGTT

Downstream 100 bases:

>100_bases
AAACATATTTAACAGACACTATATAATTAGTTATAGTTTAATTTTATGACAACACTGACTATAAAAAATCTATCTAAAAT
TTATAAAGGACGATATGTAG

Product: ABC transporter periplasmic substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKSNAYGKYKIILTYINILLAFTYSHALAYKKSQILQIYSECQSINMLTNTIIFTDRVMLKYKNIDLYADKILISHTEDT
HHLSMIEAHGNPVTLNQTQKMGNMIFAQSSIIHYNTSDDTITLIGNAYIKQSGNSIQSDKIIYSIKNKQIKAISNQGNKV
ITILSKKSI

Sequences:

>Translated_169_residues
MKSNAYGKYKIILTYINILLAFTYSHALAYKKSQILQIYSECQSINMLTNTIIFTDRVMLKYKNIDLYADKILISHTEDT
HHLSMIEAHGNPVTLNQTQKMGNMIFAQSSIIHYNTSDDTITLIGNAYIKQSGNSIQSDKIIYSIKNKQIKAISNQGNKV
ITILSKKSI
>Mature_169_residues
MKSNAYGKYKIILTYINILLAFTYSHALAYKKSQILQIYSECQSINMLTNTIIFTDRVMLKYKNIDLYADKILISHTEDT
HHLSMIEAHGNPVTLNQTQKMGNMIFAQSSIIHYNTSDDTITLIGNAYIKQSGNSIQSDKIIYSIKNKQIKAISNQGNKV
ITILSKKSI

Specific function: Required for the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. May act as a chaperone that facilitates LPS transfer across the aquaeous environment of the periplasm. Interacts specifically with the lipid A domain

COG id: COG1934

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptA family [H]

Homologues:

Organism=Escherichia coli, GI1789592, Length=147, Percent_Identity=31.2925170068027, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014340
- InterPro:   IPR005653 [H]

Pfam domain/function: PF03968 OstA [H]

EC number: NA

Molecular weight: Translated: 19186; Mature: 19186

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNAYGKYKIILTYINILLAFTYSHALAYKKSQILQIYSECQSINMLTNTIIFTDRVML
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECEEEE
KYKNIDLYADKILISHTEDTHHLSMIEAHGNPVTLNQTQKMGNMIFAQSSIIHYNTSDDT
EEECCEEEEEEEEEECCCCCCEEEEEEECCCEEEECHHHHHCCEEEEECEEEEEECCCCE
ITLIGNAYIKQSGNSIQSDKIIYSIKNKQIKAISNQGNKVITILSKKSI
EEEEECEEEECCCCCCCCCEEEEEECCCEEEEECCCCCEEEEEEEECCC
>Mature Secondary Structure
MKSNAYGKYKIILTYINILLAFTYSHALAYKKSQILQIYSECQSINMLTNTIIFTDRVML
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECEEEE
KYKNIDLYADKILISHTEDTHHLSMIEAHGNPVTLNQTQKMGNMIFAQSSIIHYNTSDDT
EEECCEEEEEEEEEECCCCCCEEEEEEECCCEEEECHHHHHCCEEEEECEEEEEECCCCE
ITLIGNAYIKQSGNSIQSDKIIYSIKNKQIKAISNQGNKVITILSKKSI
EEEEECEEEECCCCCCCCCEEEEEECCCEEEEECCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]