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The map label for this gene is sodA [H]

Identifier: 71891814

GI number: 71891814

Start: 24354

End: 24971

Strand: Reverse

Name: sodA [H]

Synonym: BPEN_021

Alternate gene names: 71891814

Gene position: 24971-24354 (Counterclockwise)

Preceding gene: 71891816

Following gene: 71891811

Centisome position: 3.15

GC content: 30.42

Gene sequence:

>618_bases
ATGAGTTTCATATTACCTTCTTTAACTTATTCATATGATGCTTTAGAGCCATTTCTTGACGAAAAAACTATGAAGATTCA
TCATACAAAACACCATCAAGCATATATTGATAACGCTAATGCAGCACTAATTGATTTACCTGAATTTTCCAATCTACCTG
TCATAGAATTAATAAAAAAATTAAATCATTTACCTAATCACAAAAAAACCATATTACGCAACAATGCCGGAGGACATATC
AATCATAGCCTTTTTTGGAAGTATCTTAAAAAGAATACTATACTTCAAGGATCATTAAAAGATGCAATAGAATATAACTT
TTCAAGTATCTCTTCTTTTAAAGAGCATTTTGAAAAAACTGCTATCAGTCGTTTTGGATCTGGTTGGGTATGGCTCATAA
AACACAATAATATTTTATCTATAGTATCTACTGCCAATCAAGATAACCCATTAATGGGGATAGATATCTCCGGAACAAAT
GGATATCCAATTCTTGGATTAGATGTGTGGGAACACGCTTATTATTTAAAATATCAAAATCGGCGTTTAGATTATATTAG
ATCATTTTGGAATGTAGTCAACTGGGATGAAGTATACGCACAATTTAATCAAGTATAA

Upstream 100 bases:

>100_bases
AATCTACTTGTATACATTATTTATTAATAAATGTATAATTTAAATTGTTCTTAGAATTACTATGCTTTAATATTTACATA
ACTATGGAGAAATTTTTATT

Downstream 100 bases:

>100_bases
AAATGCTTGTTAATTAACTAAAGTGGTCAGATTTTTTAACATTCATGTAAAACTTATGACCACTTTCTAAATCTCAATCC
GTAAGTGTCTTGAGATGTAT

Product: superoxide dismutase (Mn)

Products: NA

Alternate protein names: MnSOD [H]

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSFILPSLTYSYDALEPFLDEKTMKIHHTKHHQAYIDNANAALIDLPEFSNLPVIELIKKLNHLPNHKKTILRNNAGGHI
NHSLFWKYLKKNTILQGSLKDAIEYNFSSISSFKEHFEKTAISRFGSGWVWLIKHNNILSIVSTANQDNPLMGIDISGTN
GYPILGLDVWEHAYYLKYQNRRLDYIRSFWNVVNWDEVYAQFNQV

Sequences:

>Translated_205_residues
MSFILPSLTYSYDALEPFLDEKTMKIHHTKHHQAYIDNANAALIDLPEFSNLPVIELIKKLNHLPNHKKTILRNNAGGHI
NHSLFWKYLKKNTILQGSLKDAIEYNFSSISSFKEHFEKTAISRFGSGWVWLIKHNNILSIVSTANQDNPLMGIDISGTN
GYPILGLDVWEHAYYLKYQNRRLDYIRSFWNVVNWDEVYAQFNQV
>Mature_204_residues
SFILPSLTYSYDALEPFLDEKTMKIHHTKHHQAYIDNANAALIDLPEFSNLPVIELIKKLNHLPNHKKTILRNNAGGHIN
HSLFWKYLKKNTILQGSLKDAIEYNFSSISSFKEHFEKTAISRFGSGWVWLIKHNNILSIVSTANQDNPLMGIDISGTNG
YPILGLDVWEHAYYLKYQNRRLDYIRSFWNVVNWDEVYAQFNQV

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=202, Percent_Identity=41.0891089108911, Blast_Score=148, Evalue=3e-36,
Organism=Homo sapiens, GI67782305, Length=202, Percent_Identity=41.0891089108911, Blast_Score=148, Evalue=3e-36,
Organism=Homo sapiens, GI67782309, Length=200, Percent_Identity=35.5, Blast_Score=118, Evalue=5e-27,
Organism=Escherichia coli, GI1790342, Length=202, Percent_Identity=69.8019801980198, Blast_Score=308, Evalue=2e-85,
Organism=Escherichia coli, GI1787946, Length=201, Percent_Identity=39.8009950248756, Blast_Score=142, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17569479, Length=201, Percent_Identity=37.3134328358209, Blast_Score=134, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17506561, Length=202, Percent_Identity=38.1188118811881, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6321796, Length=215, Percent_Identity=33.4883720930233, Blast_Score=123, Evalue=2e-29,
Organism=Drosophila melanogaster, GI17136812, Length=204, Percent_Identity=39.7058823529412, Blast_Score=147, Evalue=7e-36,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 23867; Mature: 23736

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFILPSLTYSYDALEPFLDEKTMKIHHTKHHQAYIDNANAALIDLPEFSNLPVIELIKK
CCEECCCCCCCHHHHHHHHCCCCEEEECCCCCCEEEECCCEEEEECCCCCCCCHHHHHHH
LNHLPNHKKTILRNNAGGHINHSLFWKYLKKNTILQGSLKDAIEYNFSSISSFKEHFEKT
HHCCCCCCHHHEECCCCCCCCHHHHHHHHHHCCEECCCHHHHHHCCHHHHHHHHHHHHHH
AISRFGSGWVWLIKHNNILSIVSTANQDNPLMGIDISGTNGYPILGLDVWEHAYYLKYQN
HHHHCCCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEHHHHHEEEEEECC
RRLDYIRSFWNVVNWDEVYAQFNQV
CHHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SFILPSLTYSYDALEPFLDEKTMKIHHTKHHQAYIDNANAALIDLPEFSNLPVIELIKK
CEECCCCCCCHHHHHHHHCCCCEEEECCCCCCEEEECCCEEEEECCCCCCCCHHHHHHH
LNHLPNHKKTILRNNAGGHINHSLFWKYLKKNTILQGSLKDAIEYNFSSISSFKEHFEKT
HHCCCCCCHHHEECCCCCCCCHHHHHHHHHHCCEECCCHHHHHHCCHHHHHHHHHHHHHH
AISRFGSGWVWLIKHNNILSIVSTANQDNPLMGIDISGTNGYPILGLDVWEHAYYLKYQN
HHHHCCCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEHHHHHEEEEEECC
RRLDYIRSFWNVVNWDEVYAQFNQV
CHHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]