Click here to switch to the map view.

The map label for this gene is ligA

Identifier: 71737941

GI number:

Start: 2081781

End: 2084144

Strand: Direct

Name: ligA

Synonym: PSPPH_1779

Alternate gene names: NA

Gene position: NA

Preceding gene: 71735942

Following gene: 71734908

Centisome position: NA

GC content: NA

Gene sequence:

>2364_bases
ATGAAGGCCGTCGAAACCCGAATCCTGGAACTGCGTGCAGAGCTGGATGAGCACAACTACCGCTATCACGTGCTGGATGA
GCCCAGCATCCCGGATGTCGAGTACGACCGCCTGTTTCACGAACTCAAGGCCCTTGAGGCAGAAAACCCGCATCTGGTCA
CGCCGGATTCGCCGACGCAACGGGTCGGCAGTGCCGCTTTGTCGGCGTTCACCCAGGTGCGGCACGAAATGCCGATGCTC
AGCCTGGGCAACGCTTTCGAAGAAAACGACATGCTCGAGTTTGACCGGCGGGTAACCGAAGGGCTGGACTTGCCTGCCGG
GGACCTGTTTGGTGCGGGCAGCAAGGTGCAGTACAGCTGCGAGCCCAAGCTGGACGGTCTGGCAGTCAGCCTGCTGTATC
GCGATGGTGCGCTGGTACGCGGTGCGACGCGTGGGGACGGGACCACCGGCGAGGATATCAGCGTCAATGTACGCACCGTG
CGGAACATCCCGCTCAAGCTGAAAGGCAAGGGCTGGCCGGATGTGCTGGAAGTGCGCGGCGAAGTGTTCATGTCCAAGGC
AGGTTTCGAGCGGCTCAACGCCAGCCAGCTGGAAATCGGCGGCAAGACCTTCGCCAACCCGCGCAATGCGGCGGCGGGCA
GCCTGCGCCAGCTGGACTCGAAAATCACTGCCAATCGTCCGCTGGAATTCTGCTGCTATGGCCTGGGGCAGACTTCGGCG
GAAATCGCCGACACTCACATCGGTGTGCTTGAAACGTTGAAAAAATGGGGCATGCCGGTCAGTCACGAGCTGAAGCTGGC
GAATGGCGTCGAGGAGTGTCTGGACTATTACCGCGATATCGGTGAGCGGCGCCTGACGCTGAGCTACGAGATCGACGGTG
TGGTGTTCAAGGTCAACAACCTGGCTGCGCAGCGCGAACTGGGCTTTCGCGCCCGCGAGCCACGCTGGGCGATCGCCCAT
AAATTCCCTGCCATGGAAGAGCTGACCGAGTTGCTGGATGTCGAGTTCCAGGTAGGCCGTACCGGTGCGGTAACGCCGGT
CGCGCGCCTCAAGCCAGTCAAGGTGGCGGGTGTCATGGTCGCCAACGCCACGCTGCACAACATGGATGAAGTGGCGCGGC
TCGGCTTGATGATTGGCGACACGGTGATCATACGTCGTGCCGGTGACGTGATTCCTCAAGTGGTGCAGGTGGTTGCCGAG
CGCCGCCCCGAGAATGCCAGGGCGGTGCAGGTTCCACAGACCTGCCCGGTGTGCGGCTCGCATGTCGAGCGCACGCAGTT
GATCAAACGCAGCAAGGGCAAGGAAACCGTCACCGAAGGTGCGGTGTATCGCTGCGTCGGGCGTCTGGCCTGCGGTGCGC
AACTCAAACAGGCGATCATCCACTATGTGTCACGTCGTGCGATGGACATTGAAGGGTTGGGAGACAAGACCATCGAGCAA
CTGGTCGATGAAAAACTCATTGGCTCGCCCGCCGACCTGTACAAGTTGAAATACGAACAAATCATCGACCTGGAAGGCTT
TGCCGAAATTTCCAGCAACAAGCTGCTCAAGGCGATTGCCGACAGCCGACAGCCGACCCTGGCGCGCTTCATCTATGCCC
TGGGCATTCCCGATGTGGGCGAGGAGACGGCCAAGGTGCTGGCGCGTTCGCTGGCGTCTCTGGACCGCGTCAAACAGGCA
TTGCCGGAAGTCCTGACGTACCTGCCGGATGTCGGTCTGGAAGTCGCCTACGAAATTCACAGCTTCTTCGAAGACGAGCA
CAACCGTAACGTCATTGATGCGCTGTTGGGCGAATGTGGACTGCAATTGCAGGACCAGGGCGAGTTGGGCGCCGAGTTTG
CGGCCAGCACTACGCTCGAAGGGCTGATCGACAAATTACATATCCCGTCGGTAGGGCCGGGCGCTGCACAAAAACTGGCT
GACAGATTCGGCACGCTGGAGGCCATCATCAGCGCCGATTGGCTGGACATGCGCCAGACGCTGCCGGAGAAGCAGGCCAA
ATCAGTCCGTGATTTCTTCGACGACAGCGCACATGCCGAGCGTGCACGCGCCATAGAAGCCCAGCTCAAAGACTTCGGCA
TGCACTGGCGCAGCGAGAAAAAAACCGTCGAAGGCTTGCCGCTGGCCGGGCAGACCTGGGTACTGACGGGGTCGCTGGAA
CGCATGAGTCGCGACGTCGCCAAGGAAAAACTCGAAAGCCTTGGTGCCAAAGTCTCCGGCTCGGTCTCGGCCAAGACCCA
CACCGTGGTTGCAGGCCCCGGTGCAGGCTCGAAACTGACCAAGGCCAACGAGCTGGGGCTGACCGTACTGGACGAAGATG
CGCTGCTCAAACGCCTGACCGAACTGGGCGTGGCGGTTGACTGA

Upstream 100 bases:

>100_bases
GCATGCTCCGGCAGGCCTTTTCGGGACCTGGGCTTGAACAGATCAGAGCCAACAGATTGAGCAGCCTCGGCTGCTCTTTT
GCTTTTTGAGAGAACACCGT

Downstream 100 bases:

>100_bases
GGCAGGCCGACGCTCCACTTGATTATCGTGCGCTCCGCGTCGCATGCCGTTCTGGACGCTCTGCGTCCGATCTTGAGCGT
GCGGCGCAGCGCATATCTGT

Product: NAD-dependent DNA ligase LigA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>787_residues
MKAVETRILELRAELDEHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVGSAALSAFTQVRHEMPML
SLGNAFEENDMLEFDRRVTEGLDLPAGDLFGAGSKVQYSCEPKLDGLAVSLLYRDGALVRGATRGDGTTGEDISVNVRTV
RNIPLKLKGKGWPDVLEVRGEVFMSKAGFERLNASQLEIGGKTFANPRNAAAGSLRQLDSKITANRPLEFCCYGLGQTSA
EIADTHIGVLETLKKWGMPVSHELKLANGVEECLDYYRDIGERRLTLSYEIDGVVFKVNNLAAQRELGFRAREPRWAIAH
KFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVMVANATLHNMDEVARLGLMIGDTVIIRRAGDVIPQVVQVVAE
RRPENARAVQVPQTCPVCGSHVERTQLIKRSKGKETVTEGAVYRCVGRLACGAQLKQAIIHYVSRRAMDIEGLGDKTIEQ
LVDEKLIGSPADLYKLKYEQIIDLEGFAEISSNKLLKAIADSRQPTLARFIYALGIPDVGEETAKVLARSLASLDRVKQA
LPEVLTYLPDVGLEVAYEIHSFFEDEHNRNVIDALLGECGLQLQDQGELGAEFAASTTLEGLIDKLHIPSVGPGAAQKLA
DRFGTLEAIISADWLDMRQTLPEKQAKSVRDFFDDSAHAERARAIEAQLKDFGMHWRSEKKTVEGLPLAGQTWVLTGSLE
RMSRDVAKEKLESLGAKVSGSVSAKTHTVVAGPGAGSKLTKANELGLTVLDEDALLKRLTELGVAVD

Sequences:
NA

Specific function: NA

COG id: COG0272

COG function: function code L; NAD-dependent DNA ligase (contains BRCT domain type II)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA