Definition Pseudomonas fluorescens Pf-5 chromosome, complete genome.
Accession NC_004129
Length 7,074,893

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The map label for this gene is rpoE

Identifier: 70731967

GI number:

Start: 5335883

End: 5336401

Strand: Direct

Name: rpoE

Synonym: PFL_4625

Alternate gene names: NA

Gene position: NA

Preceding gene: 70731966

Following gene: 70731968

Centisome position: NA

GC content: NA

Gene sequence:

>519_bases
GTGAGTCAATCGCACTTCAACCACGTCTTCCTCACCCAACGCATTTCTCTGCTGCGAACGCTGGAGCGGATGGTCAACAA
CCACAGCACCGCCGAAGACCTGCTGCAGGAAACCTACCTGCGCGTGACCCGGGCCCTGAGCGAGAGGCCGATCACGCACC
TTGAACCCTTTGTCTTCCAGACCGCGCGCAACCTCGCCCTGGATCACCTGCGGGCCCGGCGCATCCAGGGCCGCACCCTG
CTCGAAGACGTACCGCCGGAGGTGGTGGAGAATGTCGCCGCGCCCGTCAGCAGTGCCGAAGACGCGGCCCACGCCGAGCA
GATGCTGGAACGCCTGAACCTCAGCCTCGGCCAGCTCAGCCCGCGCCAGCAGCAGATCTTCATCCTCAGCCGCCTGCACG
GCCACAGTTACCAGGAGATCGCCGACGAGCTCGGGGTTTCACTGAGCACGGTGCAAAAGGAATTGAAACTGATCATGGCC
ATCTGCATCGGCGTCGCCGAACGTCTCGACGGCCAGTGA

Upstream 100 bases:

>100_bases
CAGGCCTACCTGGCCGGCCGAGGATAATTCACGCAAGGCTTGACCATTGACGTAGATGACAATCATTATCATCTGCTGAA
AAAATGGATCAGGCCTTGCT

Downstream 100 bases:

>100_bases
GTCTCAACCGCTGAGCAGAATGACTGCGGCAGCCCCGAGCCTTTGTTAACCTTGGCCGGCTTTCGCTCTCTCTTGAAAAA
ACAGCCGCGCACAGACGCAG

Product: ECF subfamily RNA polymerase sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>172_residues
MSQSHFNHVFLTQRISLLRTLERMVNNHSTAEDLLQETYLRVTRALSERPITHLEPFVFQTARNLALDHLRARRIQGRTL
LEDVPPEVVENVAAPVSSAEDAAHAEQMLERLNLSLGQLSPRQQQIFILSRLHGHSYQEIADELGVSLSTVQKELKLIMA
ICIGVAERLDGQ

Sequences:
NA

Specific function: NA

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA