| Definition | Pseudomonas fluorescens Pf-5 chromosome, complete genome. |
|---|---|
| Accession | NC_004129 |
| Length | 7,074,893 |
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The map label for this gene is prpD
Identifier: 70729248
GI number:
Start: 2072543
End: 2074027
Strand: Direct
Name: prpD
Synonym: PFL_1865
Alternate gene names: NA
Gene position: NA
Preceding gene: 70729247
Following gene: 70729250
Centisome position: NA
GC content: NA
Gene sequence:
>1485_bases ATGAGCAGCAACGTTGACCTGAACAACCGTCCCGATTACGACCAGGTCCTGCAGGACATTGCCGATTACGTCCTGGATTA TTCCATCGACTCCCGAGAAGCCCTCGATACCGCACGCAATTGCCTCATGGACACCCTGGGCTGCGGCCTGCTGGCCCTGC GTTTTCCCGAATGCACCAAGCACCTGGGGCCGATCGTCGAAGGCACCGTGGTGCCTTTCGGTGCCCGGGTGCCCGGTACC AGCTATCGCCTCGACCCGGTGAAGGCGGCCTGGGACATCGGCTGCATCGTGCGCTGGCTGGACTACAACGACACCTGGCT CGCGGCCGAATGGGGCCACCCCTCGGACAACCTCGGGGGAATTCTGGCGGTGGCCGATCACCTGTCACAAAAACGCGTGG CCAATGGCGAAGCACCGCTGACCATGAATGATGTGCTCAAGGCCATGATCATGGCCCATGAGATTCAAGGCGTGATTGCC CTGGAAAACTCCTTCAACCGTGTCGGCCTCGATCATGTGCTGCTGGTGAAAGTGGCTTCCACCGCAGTGTGCGCCAAGCT GATGGGGGCCAATCGCGAGCAGTTGCTGGCGGCACTGTCCCAGGCCTTTGTCGATGGCCAGGCGCTGCGTACCTATCGCC ATGCACCCAATGCCGGTTCGCGCAAATCCTGGGCGGCGGGGGATGCCTCCAGCCGTGGAGTGCGCCTGGCGGATATCGCC CTGCGTGGCGAGATGGGCATTCCCGGCGTCCTGACGGCGCCGCAGTGGGGCTTCTATGACGTGCTGTTCAGCCATACCAA CAAGGACCTGGCGCTCAAACCCGAGGGCCAGCGGCAGTTCAGCCTGACGCAGAAATACGCCAGCTACGTGATGGAAAACG TGCTGTTCAAGATCAGTTTCCCGGCAGAATTCCATGCGCAAACGGCCTGCGAAGCGGCCGTGACCTTGCATCCTCTGGTG CGCAACCGCCTGCACGAAATCGACCGCATCGTCATCACCACCCATGAGTCGGCGATCCGCATCATTTCCAAGGTCGGGCC GCTGGCCAATGCCGCCGACCGCGACCACTGCCTGCAATACATGACCGCCGTGCCCCTGGCCTTCGGCACCCTGGTGGCCG AGCATTACGAGGACGATTTCCATGCCGCGCACCCGATCATCGATCAGTTGCGCGAGAAGATGCACATCGTCGAAGAGCCT CGCTACACCCGTGAATACCTGGAGGCCGACAAGCGCTCCATTGCCAATGCGATCCAGGTGTTCTTCAAGGACGGCTCCAG CACCGAGCAGGTCGCGGTGGAATACCCCATTGGCCACCGGCGCCGCCGCGCCGAAGGCATCCCGCTGCTGGAAGACAAGT TCAAGGCCAACCTGGCCACGCGTTTCACGGCCCAGCGTTCGACGCAGATTTTCCAGCTGTGCAAGGATCAGGCGCGGCTT GAGGCGACGCCGGTGCACCGGTTCGTCGACCTGCTGGTGATCTGA
Upstream 100 bases:
>100_bases GAATCGCTGAGCAGGCGCAGACCTGCGATGCCGTTATTGACCTGAACCTGTCACTGAGGAATCGACACCACCTACCATCC TGTACTGGAGTGAAGCGCTC
Downstream 100 bases:
>100_bases AACCCACCCGTGTAGGGGCGAGCTTGCTCGCGATGAACGTCAATGATGACGTGGGCTCGCTGGGCGGACGCGGTGTCCTA AAAGCCTTCGCGAGCAAGCT
Product: 2-methylcitrate dehydratase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>494_residues MSSNVDLNNRPDYDQVLQDIADYVLDYSIDSREALDTARNCLMDTLGCGLLALRFPECTKHLGPIVEGTVVPFGARVPGT SYRLDPVKAAWDIGCIVRWLDYNDTWLAAEWGHPSDNLGGILAVADHLSQKRVANGEAPLTMNDVLKAMIMAHEIQGVIA LENSFNRVGLDHVLLVKVASTAVCAKLMGANREQLLAALSQAFVDGQALRTYRHAPNAGSRKSWAAGDASSRGVRLADIA LRGEMGIPGVLTAPQWGFYDVLFSHTNKDLALKPEGQRQFSLTQKYASYVMENVLFKISFPAEFHAQTACEAAVTLHPLV RNRLHEIDRIVITTHESAIRIISKVGPLANAADRDHCLQYMTAVPLAFGTLVAEHYEDDFHAAHPIIDQLREKMHIVEEP RYTREYLEADKRSIANAIQVFFKDGSSTEQVAVEYPIGHRRRRAEGIPLLEDKFKANLATRFTAQRSTQIFQLCKDQARL EATPVHRFVDLLVI
Sequences:
NA
Specific function: NA
COG id: COG2079
COG function: function code R; Uncharacterized protein involved in propionate catabolism
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA