Definition Sulfolobus acidocaldarius DSM 639 chromosome, complete genome.
Accession NC_007181
Length 2,225,959

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The map label for this gene is rpoA1

Identifier: 70606495

GI number:

Start: 548014

End: 550656

Strand: Reverse

Name: rpoA1

Synonym: Saci_0692

Alternate gene names: NA

Gene position: NA

Preceding gene: 70606496

Following gene: 70606494

Centisome position: NA

GC content: NA

Gene sequence:

>2643_bases
ATGAGTGAGAAGATTATACGGGGCGTAAAATTTGGTGTATTATCACCTAATGAAATAAGGCAAATGTCAGTTACAGCAAT
AATAACTTCAGAGGTATATGATGAAGACGGTACTCCAATCGAAGGAGGAGTAATGGATCCAAAACTAGGTGTAATAGAGC
CCGGTCAAAAATGTCCCGTATGTGGTAACACGTTAGCAGGTTGTCCTGGTCATTTCGGCCATATAGAACTTATTAAACCA
GTCATTCACATAGGTTATGTTAAACACATTTATGATTTCCTCAGGAGTACCTGTTGGAGATGTGGTAGAATAAAGATTAA
GGAGCAAGATTTAGAGAGATATAAGAGAATATATAATGCTATAAAGCTCAGATGGCCATCTGCAGCAAGAAGGTTAGTAG
AGTATATAAAGAAAATATCTATTAAGAACCTAGAATGTCCTCATTGCGGTGAAAAACAATTCAAGATAAAATTAGAAAAA
CCATATAATTTCAATGAGGAAAGGAATGGATCAATAGTGAAATTATCCCCCTCAGAGATAAGAGATAGATTAGAAAGAAT
ACCTGACAGTGACGTTGAGCTTTTAGGATATGATCCTAAATCCTCTAGACCTGAGTGGATGATTTTAACTGTTTTACCAG
TCCCCCCAATAACCATTAGGCCCTCTATAACTATCGAAAGTGGAATAAGAGCCGAGGATGATCTTACTCATAAGCTTGTT
GATATAATAAGGCTTAATGAAAGATTAAAAGAAAGTATTGAGGCAGGTGCTCCACAATTAATAATAGAGGATTTATGGGA
TTTATTGCAATATCATGTCGCTACTTACTTTGATAATGAGATACCCGGCTTGCCTCCAGCCAAGCATAGATCCGGAAGAC
CTTTAAGGACACTTGCTCAGAGACTGAAAGGTAAAGAGGGTAGATTTAGGGGGAACTTATCAGGCAAGAGAGTTGATTTC
TCCGCAAGAACTGTAATATCTCCAGACCCCAATTTGAGTATAGATGAAGTAGGAATTCCATATACCATAGCGAGAATGTT
AACTGTACCGGAAAGGGTAACTAATATAAACATAGAAAGAATAAGGCAATACATTATAAACGGTCCCGATAAATGGCCAG
GAGCGAATTATGTAATAAAACCTGATGGTAGAAGGATTGATCTAAGGTATGTTAAAGATAGAAAAGAATTAGCTTCTAGT
ATAACTGCAGGATATGTAGTTGAGAGACACTTAGTAGATGGAGATGTGGTGCTTTTTAATAGACAGCCTTCATTGCACAG
GATCTCGATGATGGCCCACAAAGTTAGGGTATTACCAGGTAGAACATTCAGATTAAATCTGTTAGATTGTCCTCCATATA
ACGCTGACTTTGATGGAGACGAAATGAATCTACATGTTCCACAATCAGAGGAAGCTATAGCAGAGGCAAGGGAATTGATG
TTAGTGCATAAAAACATTATTACTCCTAGATACGGCGGACCCATCATAGGTGGGGGACAGGATTATATAAGTGGTGCTTA
TTTGTTATCAGTAAAAACTACTCTACTAACAGTTGAAGAAGTGGCTACTATATTGGGAGTAACAGACTTTGTAGGAGAGC
TAGGAGAACCGGCTATACTTGCTCCAAAGCCATATTACACCGGAAAACAGGTAATCAGTCTATTTTTGCCTAAAGATTTT
AACTTCCATGGTCCTGCTAATATATCAAAAGGACCTAGAGCATGTAAGGATGAGATTTGTCCTCATGACTCGTTTATCGT
CATCAAAAATGGACTATTGTTAGAAGGTGTATTTGATAAGAAAGCAATAGGAAATCAACAGCCAGAAAGTATGTTGCATT
GGTCTATTAGAGAATACGGTACCGAATATGGTAAATGGTTAATGGATAATGTGTTTAAGATGTTCATTAGGTTTTTAGAG
ATGAGAGGTTTCACTATGACTTTGGAGGATATAACTATACCAGATGAAGCTCAAAATGAAATAACTACTAAAATTAAAGA
GGGATATAGTCAGGTTGATGAGTATATAAGGAAATTTAATGAAGGACAGCTTGAACCAATACCTGGAAGAACAATTGAAG
AAAGCCTAGAAAGTTATATACTTGATACACTAGATAAACTGAGAAAAGTAGCAGGAGAAATAGCTACAAAATACTTGGAT
CCATTTAACAATGTATACATTATGGCCATAACTGGTGCTAGAGGAAGTGAGTTGAATATAACCCAGATGACCGCTTTATT
AGGACAGCAATCAGTGAGGGGAGAGAGAATTAGAAGAGGATATAGAGAGAGGACATTATCTTTGTTTAAATATGGTGACA
TAGCACCTGAAGCAAGAGGTTTCGTTAAGAACTCCTTCATGAGGGGTCTAAGCCCATATGAAATGTTCTTCCATGCAGCA
GGAGGTAGAGAGGGATTAGTTGATACTGCTGTAAAGACGTCACAAAGCGGTTACATGCAGAGGAGGTTAATTAACGCTTT
ATCAGATCTAAGGATAGAATATGATGGAACTGTGAGAAGTTTATATGGAGATATTGTTCAAGTAGTATATGGTGATGATG
CAGTGCATCCCATGTATAGTGCCCATAGTAAAAGTGTGAATGTTAACAGAGTTATAGAAAGAGTTATTGGTTGGAAGAGG
TGA

Upstream 100 bases:

>100_bases
GTTTCATACGCGTTTAAACTTTTAATTCAAGAACTTATGAGTATGGTAATTTCACCGAGATTAATTTTAGGTGAAAAAGT
AAACTTAGGAGGTGCTTCAA

Downstream 100 bases:

>100_bases
AAAAATGATAGATGAAAAGTTAAAGGGTTATATTGATAAGAGATTAAACGAAATAAAGGACAAAATTCCCGATAAGTTAC
ATGAAGATCTTAGAGCTGCA

Product: DNA-directed RNA polymerase subunit A'

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>880_residues
MSEKIIRGVKFGVLSPNEIRQMSVTAIITSEVYDEDGTPIEGGVMDPKLGVIEPGQKCPVCGNTLAGCPGHFGHIELIKP
VIHIGYVKHIYDFLRSTCWRCGRIKIKEQDLERYKRIYNAIKLRWPSAARRLVEYIKKISIKNLECPHCGEKQFKIKLEK
PYNFNEERNGSIVKLSPSEIRDRLERIPDSDVELLGYDPKSSRPEWMILTVLPVPPITIRPSITIESGIRAEDDLTHKLV
DIIRLNERLKESIEAGAPQLIIEDLWDLLQYHVATYFDNEIPGLPPAKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDF
SARTVISPDPNLSIDEVGIPYTIARMLTVPERVTNINIERIRQYIINGPDKWPGANYVIKPDGRRIDLRYVKDRKELASS
ITAGYVVERHLVDGDVVLFNRQPSLHRISMMAHKVRVLPGRTFRLNLLDCPPYNADFDGDEMNLHVPQSEEAIAEARELM
LVHKNIITPRYGGPIIGGGQDYISGAYLLSVKTTLLTVEEVATILGVTDFVGELGEPAILAPKPYYTGKQVISLFLPKDF
NFHGPANISKGPRACKDEICPHDSFIVIKNGLLLEGVFDKKAIGNQQPESMLHWSIREYGTEYGKWLMDNVFKMFIRFLE
MRGFTMTLEDITIPDEAQNEITTKIKEGYSQVDEYIRKFNEGQLEPIPGRTIEESLESYILDTLDKLRKVAGEIATKYLD
PFNNVYIMAITGARGSELNITQMTALLGQQSVRGERIRRGYRERTLSLFKYGDIAPEARGFVKNSFMRGLSPYEMFFHAA
GGREGLVDTAVKTSQSGYMQRRLINALSDLRIEYDGTVRSLYGDIVQVVYGDDAVHPMYSAHSKSVNVNRVIERVIGWKR

Sequences:
NA

Specific function: NA

COG id: COG0086

COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA