| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is trxB [H]
Identifier: 68537188
GI number: 68537188
Start: 2451635
End: 2452669
Strand: Direct
Name: trxB [H]
Synonym: jk2093
Alternate gene names: 68537188
Gene position: 2451635-2452669 (Clockwise)
Preceding gene: 68537187
Following gene: 68537189
Centisome position: 99.56
GC content: 62.03
Gene sequence:
>1035_bases ATGAACCAGCCATTCCTGCAGGCCAGCGGTATTCTCAACAATGATTCGAAGGGTGCCGCGGACGCGGATAACGCCAGCGC GACGAGTGCAGCCGGCGCTGCGGAAGCGGAGGCAGGCAAGGTTCACGACGTCATCATCATCGGCTCCGGCCCGGCTGGCT ACACCGCCGCTGTTTACGCAGCCCGCGCAGAGCTGAACCCGGTGGTCTTTGAAGGCGTGGAGTACGGCGGACTGCTGATG CAGACCACCGAGGTGGAGAACTTCCCCGGCTTCCAGAAGGGCATCATGGGGCCCGACCTGATGGAAGAGATGCGCGCCCA GGCCGAGCGTTTCGGCGCTGACCTGCGCCAAGAGGACGTAGAGAAGGTTGATCTAACCGGCGAGATCAAGAAGGTGTGGG CTTACGGCGAGGAGTACCAAGCCCGCACAGTGATCCTGGCTACCGGCGCCGCCCCACGCTACCTGCACGTTCCCGGCGAG CAGGAAATGCTGGGCCGTGGCGTATCCGCCTGTGCGACATGCGATGGCTTCTTCTTCAAGGACAAGCAGATCGCCGTGAT CGGTGGCGGAGACTCCGCCATGGAGGAGGCCGACTTCCTGACGAAGTTCGGCGAGACCGTCACCATCATTCACCGCCGCG ACGAATTCCGCGCCTCCAAGATCATGGAGGAGCGCGCCCGTAACAACCCGAAGATCAAATTCCTGACTAACGCCAAGGTC GTGGAAGTGAAGGGCGATAAGTCCGTTGAGACTCTCGTGGTGGAAGATACCCAGAACGGCGAGCAGAAGGACGTTGCGAT GGACGCCATGTTCGTCGCCATTGGCCATGATCCGCGCACCGCTGTCTTCGAGGGGCAGGTAGAGCTGCAGGATAACGGGT ATGTGAAGGTCGAAGAGCCCTCCACCCGCACCAGCCTTCCTGGTGTGTTCGCCGCCGGCGACCTGGTGGATTCCCACTAC CAGCAGGCAATCACCGCAGCTGGTTCTGGCTGCCGCGCTGCTCTGGATGCCGAGGCGTACCTCGCGACTCTTTAA
Upstream 100 bases:
>100_bases AGCGCATGATGTACGAACACCTCGGTGGGGCAGAGGAATACGGGATGGCCGTGGCCGGTTAAACTGGAGTGAACAACATC TCCGACCTCAAAGGATAGAT
Downstream 100 bases:
>100_bases CTGTTTGCGGGCATGTTTTGGGGCCCGCTCCTGTTACGGATCGCGCTCCTCGTAACGGATCGGACAAGTTCGGTCACCGT TAGGTAACTATGGCCGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: TR; TRXR [H]
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MNQPFLQASGILNNDSKGAADADNASATSAAGAAEAEAGKVHDVIIIGSGPAGYTAAVYAARAELNPVVFEGVEYGGLLM QTTEVENFPGFQKGIMGPDLMEEMRAQAERFGADLRQEDVEKVDLTGEIKKVWAYGEEYQARTVILATGAAPRYLHVPGE QEMLGRGVSACATCDGFFFKDKQIAVIGGGDSAMEEADFLTKFGETVTIIHRRDEFRASKIMEERARNNPKIKFLTNAKV VEVKGDKSVETLVVEDTQNGEQKDVAMDAMFVAIGHDPRTAVFEGQVELQDNGYVKVEEPSTRTSLPGVFAAGDLVDSHY QQAITAAGSGCRAALDAEAYLATL
Sequences:
>Translated_344_residues MNQPFLQASGILNNDSKGAADADNASATSAAGAAEAEAGKVHDVIIIGSGPAGYTAAVYAARAELNPVVFEGVEYGGLLM QTTEVENFPGFQKGIMGPDLMEEMRAQAERFGADLRQEDVEKVDLTGEIKKVWAYGEEYQARTVILATGAAPRYLHVPGE QEMLGRGVSACATCDGFFFKDKQIAVIGGGDSAMEEADFLTKFGETVTIIHRRDEFRASKIMEERARNNPKIKFLTNAKV VEVKGDKSVETLVVEDTQNGEQKDVAMDAMFVAIGHDPRTAVFEGQVELQDNGYVKVEEPSTRTSLPGVFAAGDLVDSHY QQAITAAGSGCRAALDAEAYLATL >Mature_344_residues MNQPFLQASGILNNDSKGAADADNASATSAAGAAEAEAGKVHDVIIIGSGPAGYTAAVYAARAELNPVVFEGVEYGGLLM QTTEVENFPGFQKGIMGPDLMEEMRAQAERFGADLRQEDVEKVDLTGEIKKVWAYGEEYQARTVILATGAAPRYLHVPGE QEMLGRGVSACATCDGFFFKDKQIAVIGGGDSAMEEADFLTKFGETVTIIHRRDEFRASKIMEERARNNPKIKFLTNAKV VEVKGDKSVETLVVEDTQNGEQKDVAMDAMFVAIGHDPRTAVFEGQVELQDNGYVKVEEPSTRTSLPGVFAAGDLVDSHY QQAITAAGSGCRAALDAEAYLATL
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=316, Percent_Identity=51.2658227848101, Blast_Score=298, Evalue=3e-82, Organism=Escherichia coli, GI87081763, Length=315, Percent_Identity=34.6031746031746, Blast_Score=150, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6320560, Length=317, Percent_Identity=49.5268138801262, Blast_Score=308, Evalue=7e-85, Organism=Saccharomyces cerevisiae, GI6321898, Length=313, Percent_Identity=48.2428115015974, Blast_Score=301, Evalue=9e-83,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 36859; Mature: 36859
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPFLQASGILNNDSKGAADADNASATSAAGAAEAEAGKVHDVIIIGSGPAGYTAAVYA CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHEEE ARAELNPVVFEGVEYGGLLMQTTEVENFPGFQKGIMGPDLMEEMRAQAERFGADLRQEDV HHCCCCCEEECCCCCCCEEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHH EKVDLTGEIKKVWAYGEEYQARTVILATGAAPRYLHVPGEQEMLGRGVSACATCDGFFFK HHCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCEEECCCCHHHHHCCCHHHHCCCCEEEC DKQIAVIGGGDSAMEEADFLTKFGETVTIIHRRDEFRASKIMEERARNNPKIKFLTNAKV CCEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCEE VEVKGDKSVETLVVEDTQNGEQKDVAMDAMFVAIGHDPRTAVFEGQVELQDNGYVKVEEP EEEECCCCEEEEEEECCCCCCHHHHEEEEEEEEECCCCCCEEEECEEEECCCCEEEECCC STRTSLPGVFAAGDLVDSHYQQAITAAGSGCRAALDAEAYLATL CCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEECCHHHEECC >Mature Secondary Structure MNQPFLQASGILNNDSKGAADADNASATSAAGAAEAEAGKVHDVIIIGSGPAGYTAAVYA CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHEEE ARAELNPVVFEGVEYGGLLMQTTEVENFPGFQKGIMGPDLMEEMRAQAERFGADLRQEDV HHCCCCCEEECCCCCCCEEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHH EKVDLTGEIKKVWAYGEEYQARTVILATGAAPRYLHVPGEQEMLGRGVSACATCDGFFFK HHCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCEEECCCCHHHHHCCCHHHHCCCCEEEC DKQIAVIGGGDSAMEEADFLTKFGETVTIIHRRDEFRASKIMEERARNNPKIKFLTNAKV CCEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCEE VEVKGDKSVETLVVEDTQNGEQKDVAMDAMFVAIGHDPRTAVFEGQVELQDNGYVKVEEP EEEECCCCEEEEEEECCCCCCHHHHEEEEEEEEECCCCCCEEEECEEEECCCCEEEECCC STRTSLPGVFAAGDLVDSHYQQAITAAGSGCRAALDAEAYLATL CCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEECCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]