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The map label for this gene is 68537075

Identifier: 68537075

GI number: 68537075

Start: 2307466

End: 2308884

Strand: Direct

Name: 68537075

Synonym: jk1980

Alternate gene names: NA

Gene position: 2307466-2308884 (Clockwise)

Preceding gene: 68537074

Following gene: 68537076

Centisome position: 93.7

GC content: 59.55

Gene sequence:

>1419_bases
GTGGAGCTAGCGCCCAGCCTACCACCGCTCGTACAGGCGTGGGAGGAGGAACTGTTCAACCACCCCTGGGCTCTGCCGCA
GATGCGGGAGTTGGCGTCGGGTCCCTTCCATGTGCTGTATCCAGCGCAACTGCGCACCAATCTGAGGGACTTTGCCACCA
CGGCACAGGATATGAACGTGGACTGCACTGTGTTCTTCGCACGCAAGGCGAACAAGGCCGAGTGTTGGCTGCAGGAAATC
GCCGCTGCAGATCAAGGCGTAGATGTAGCCAGCGGACCGGAGCTCGTCGGCGCTCTGGCCGGAGGAATTCGCGGGACAAA
ACTAGTGATCACCGGCGCGGAAAAAGCAGACAATCTGCTGTGGCTGGGTATCCGTCACGGGTGCACAATCGCAGCGGATT
CGCCCGGCGAACTGCAAAGAATACTAGACATCACCCGAAGGGAAACGTCTGCACACCACACCGACGGCCACACACGCGTG
CTGCTGCGCATTCTGCCCGCCGAGCAGACTGAGAGCCGCTTCGGCTGTACACCTCAAGAGTGGTCAGCGTGCATTTCGGG
TCTGCCTGAACTCGGGAAACACGTCGATATCGTCGGCTCCTGCTTTCATCTCAACGAATACAGCTCCGAGCAAAGGGGCA
AAGAAGCGCACCGCAGCCTGGACTTTATGCGTGAGCTGCGCCGCAAAGGGTGGCGAGCGGACACTCTGGACATCGGTGGG
GGATTTTCAGTTCGCTACAGCGCCGACGCAGACTGGGAAGCATTCCAACCCACGTTGACGGACGCGAGCGCTTTCCACGC
AGGCCACACTCCCAGCACCTCCTATCCCTATGGCGGGGAAAAGGCAACCGGACCGGAGATGTTGCGCGCCATTCTGAACA
CCCCTACCAAACAGGTCGACGGGCAGACCCTCGCAGAGCGATTGCGCACCGAGGGCGTAAAGCTGGCACTCGAACCTGGA
AGAGCGCTCCTAGCTGGCTGCGGACTCACCGTGTTCCCGGTACAAGGAGTCAAAAGCGCAGAGACTGAACGCAAATCCCC
AGATCTCAATCCGCAAGAGAATTCGCACTACAGGTACCAGATACTCACCGCTGCAGGACTCAGCATGAGCCTGTCCGAGC
AATGGAAATCCAGCGAATTCTTGCCCGATCCCACCCTTTGGCCACAGCGCGAAGGCACCCCTACGCGCGCGTGTGTCGGC
GGATCAAGCTGCATGGAATACGACATGCTCACCTGGAGAACCATCTGCTTTCCCCGCGCACCCAAGCGTGGCGACCTGCT
GATTTACCACAACACGGCTGGATACCAGATGGACAAGAACGAAAGCTCTTTCCACCAGCTACCGCTCCCCAGCCGCTTCG
TCTGGGATAGCTCAGTCCCCACCATTCGTCATGATCACCCCCTGCATGTGGAACTCTGA

Upstream 100 bases:

>100_bases
TCTTCGCTTTCTGCAGCGGAATGATCGTTACGGACATTCCCATCGCTCACGAACTCGCCGTACGGGCGTTTTCCGCAGGA
AGGGGAAGCGAGGTCACACT

Downstream 100 bases:

>100_bases
AAGGCTATTGGCACGTTCCATGAAAATCTCAACTCGCACTACCCACTCAGCGATGAGCGGCGCGGGCGGCGAGTCGGCGC
ACCCTGCCGTGTGCACGGTT

Product: putative diaminopimelate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MELAPSLPPLVQAWEEELFNHPWALPQMRELASGPFHVLYPAQLRTNLRDFATTAQDMNVDCTVFFARKANKAECWLQEI
AAADQGVDVASGPELVGALAGGIRGTKLVITGAEKADNLLWLGIRHGCTIAADSPGELQRILDITRRETSAHHTDGHTRV
LLRILPAEQTESRFGCTPQEWSACISGLPELGKHVDIVGSCFHLNEYSSEQRGKEAHRSLDFMRELRRKGWRADTLDIGG
GFSVRYSADADWEAFQPTLTDASAFHAGHTPSTSYPYGGEKATGPEMLRAILNTPTKQVDGQTLAERLRTEGVKLALEPG
RALLAGCGLTVFPVQGVKSAETERKSPDLNPQENSHYRYQILTAAGLSMSLSEQWKSSEFLPDPTLWPQREGTPTRACVG
GSSCMEYDMLTWRTICFPRAPKRGDLLIYHNTAGYQMDKNESSFHQLPLPSRFVWDSSVPTIRHDHPLHVEL

Sequences:

>Translated_472_residues
MELAPSLPPLVQAWEEELFNHPWALPQMRELASGPFHVLYPAQLRTNLRDFATTAQDMNVDCTVFFARKANKAECWLQEI
AAADQGVDVASGPELVGALAGGIRGTKLVITGAEKADNLLWLGIRHGCTIAADSPGELQRILDITRRETSAHHTDGHTRV
LLRILPAEQTESRFGCTPQEWSACISGLPELGKHVDIVGSCFHLNEYSSEQRGKEAHRSLDFMRELRRKGWRADTLDIGG
GFSVRYSADADWEAFQPTLTDASAFHAGHTPSTSYPYGGEKATGPEMLRAILNTPTKQVDGQTLAERLRTEGVKLALEPG
RALLAGCGLTVFPVQGVKSAETERKSPDLNPQENSHYRYQILTAAGLSMSLSEQWKSSEFLPDPTLWPQREGTPTRACVG
GSSCMEYDMLTWRTICFPRAPKRGDLLIYHNTAGYQMDKNESSFHQLPLPSRFVWDSSVPTIRHDHPLHVEL
>Mature_472_residues
MELAPSLPPLVQAWEEELFNHPWALPQMRELASGPFHVLYPAQLRTNLRDFATTAQDMNVDCTVFFARKANKAECWLQEI
AAADQGVDVASGPELVGALAGGIRGTKLVITGAEKADNLLWLGIRHGCTIAADSPGELQRILDITRRETSAHHTDGHTRV
LLRILPAEQTESRFGCTPQEWSACISGLPELGKHVDIVGSCFHLNEYSSEQRGKEAHRSLDFMRELRRKGWRADTLDIGG
GFSVRYSADADWEAFQPTLTDASAFHAGHTPSTSYPYGGEKATGPEMLRAILNTPTKQVDGQTLAERLRTEGVKLALEPG
RALLAGCGLTVFPVQGVKSAETERKSPDLNPQENSHYRYQILTAAGLSMSLSEQWKSSEFLPDPTLWPQREGTPTRACVG
GSSCMEYDMLTWRTICFPRAPKRGDLLIYHNTAGYQMDKNESSFHQLPLPSRFVWDSSVPTIRHDHPLHVEL

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009006
- InterPro:   IPR022643
- InterPro:   IPR022644
- InterPro:   IPR000183 [H]

Pfam domain/function: PF02784 Orn_Arg_deC_N; PF00278 Orn_DAP_Arg_deC [H]

EC number: NA

Molecular weight: Translated: 52339; Mature: 52339

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELAPSLPPLVQAWEEELFNHPWALPQMRELASGPFHVLYPAQLRTNLRDFATTAQDMNV
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCC
DCTVFFARKANKAECWLQEIAAADQGVDVASGPELVGALAGGIRGTKLVITGAEKADNLL
EEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCEE
WLGIRHGCTIAADSPGELQRILDITRRETSAHHTDGHTRVLLRILPAEQTESRFGCTPQE
EEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHCCCCHHH
WSACISGLPELGKHVDIVGSCFHLNEYSSEQRGKEAHRSLDFMRELRRKGWRADTLDIGG
HHHHHHCHHHHCCHHHHHHHEEECCHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
GFSVRYSADADWEAFQPTLTDASAFHAGHTPSTSYPYGGEKATGPEMLRAILNTPTKQVD
CEEEEECCCCCCHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHCC
GQTLAERLRTEGVKLALEPGRALLAGCGLTVFPVQGVKSAETERKSPDLNPQENSHYRYQ
HHHHHHHHHHCCEEEEECCCCEEHHHCCEEEEECCCCCHHHHHCCCCCCCCCCCCCEEEE
ILTAAGLSMSLSEQWKSSEFLPDPTLWPQREGTPTRACVGGSSCMEYDMLTWRTICFPRA
EEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHEECCCC
PKRGDLLIYHNTAGYQMDKNESSFHQLPLPSRFVWDSSVPTIRHDHPLHVEL
CCCCCEEEEECCCCCEECCCCCCHHCCCCCCCEEECCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MELAPSLPPLVQAWEEELFNHPWALPQMRELASGPFHVLYPAQLRTNLRDFATTAQDMNV
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCC
DCTVFFARKANKAECWLQEIAAADQGVDVASGPELVGALAGGIRGTKLVITGAEKADNLL
EEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCEE
WLGIRHGCTIAADSPGELQRILDITRRETSAHHTDGHTRVLLRILPAEQTESRFGCTPQE
EEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHCCCCHHH
WSACISGLPELGKHVDIVGSCFHLNEYSSEQRGKEAHRSLDFMRELRRKGWRADTLDIGG
HHHHHHCHHHHCCHHHHHHHEEECCHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
GFSVRYSADADWEAFQPTLTDASAFHAGHTPSTSYPYGGEKATGPEMLRAILNTPTKQVD
CEEEEECCCCCCHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHCC
GQTLAERLRTEGVKLALEPGRALLAGCGLTVFPVQGVKSAETERKSPDLNPQENSHYRYQ
HHHHHHHHHHCCEEEEECCCCEEHHHCCEEEEECCCCCHHHHHCCCCCCCCCCCCCEEEE
ILTAAGLSMSLSEQWKSSEFLPDPTLWPQREGTPTRACVGGSSCMEYDMLTWRTICFPRA
EEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHEECCCC
PKRGDLLIYHNTAGYQMDKNESSFHQLPLPSRFVWDSSVPTIRHDHPLHVEL
CCCCCEEEEECCCCCEECCCCCCHHCCCCCCCEEECCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]