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The map label for this gene is tnp3518a2 [H]

Identifier: 68536804

GI number: 68536804

Start: 2001431

End: 2002252

Strand: Direct

Name: tnp3518a2 [H]

Synonym: jk1714

Alternate gene names: 68536804

Gene position: 2001431-2002252 (Clockwise)

Preceding gene: 68536803

Following gene: 68536808

Centisome position: 81.28

GC content: 54.5

Gene sequence:

>822_bases
TTGGAGTACCTCCTACAGGCAGCAGGTATCCCACGGTCGACGTTCTTCTACCACCAGAAACGACTCAGTAAGCCAGATAA
GCACGCCGAGCTCAAAGACGCGATCCGGGCAAGTTTTGAACGTAACAAGCATCGCTACGGCTACCGACGAGTGCTACTTG
ACCTGCGTAACCAAGGTTGGGTGGTCAACCACAAACTCGTGTACAAACTCATGTGCGAGATGGGGCTGCGAGCCAAGATC
CGCCAACGTAGACCTTATGTTTCCTACACCGGGACGATCAGTCACATCGCTGACAACAAACTTGACCGCAAGTTCACCCC
GGATCAGCCAAACACCGTCTTTGTCAGCGACGTCACCGAGTTCAGGGTTGCAGGCCGCAAGGTCTACCTGTCACCGGTGA
TGGACTTGTTCGACCGTTCAATCGTTGCCCACACTGTGGCTACATCGCCGTCGACAGCGTTGACCACCGATTCTTTGTCC
AAGGCGATCGCGGCGTGTGAACCTGAACCCGGGTGGATGATACACACTGACCAAGGTTTCCAGTACCAGCATGCCTCCTG
GCGTGACCTGATCGGCGACAACGGCGGTGTTCAGTCGATGTCGCGTAAAGCCAACTGTTACGACAACGCGGTCATGGAGA
ACTTCTTCGGGCACTTGAAAACCGAGATGTACCACGGTGAAGTCTTCGACACGGTCGCAGAGTTCAACCAAGTAATCGAC
GAATACATCCAGTGGTACAACACCGAACGCATCCAACAACGACTCAAGGGCCTGACCCCGATGCAATATCGGAATCAGAC
CCTTGAAGCCCTAACCGCCTAG

Upstream 100 bases:

>100_bases
TGGAAGCGGAAAACGCTTATCTAAAAAAATTGCGGGACTTGAGGAATCAGGGACACGCCTGAAAGTCCAGGCGATTGTCA
TCCTCAAGTCGCACCACCGC

Downstream 100 bases:

>100_bases
AATTAAACCAGTCCAACTTTCGGGGGCCAGTTCAGAACTGCCCCGGGGTTTTGTTGTGCGTTTAGAATTCCGCGACCCAC
GTCACGGTCTGCTTGGGCTT

Product: transposase for IS3518

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MEYLLQAAGIPRSTFFYHQKRLSKPDKHAELKDAIRASFERNKHRYGYRRVLLDLRNQGWVVNHKLVYKLMCEMGLRAKI
RQRRPYVSYTGTISHIADNKLDRKFTPDQPNTVFVSDVTEFRVAGRKVYLSPVMDLFDRSIVAHTVATSPSTALTTDSLS
KAIAACEPEPGWMIHTDQGFQYQHASWRDLIGDNGGVQSMSRKANCYDNAVMENFFGHLKTEMYHGEVFDTVAEFNQVID
EYIQWYNTERIQQRLKGLTPMQYRNQTLEALTA

Sequences:

>Translated_273_residues
MEYLLQAAGIPRSTFFYHQKRLSKPDKHAELKDAIRASFERNKHRYGYRRVLLDLRNQGWVVNHKLVYKLMCEMGLRAKI
RQRRPYVSYTGTISHIADNKLDRKFTPDQPNTVFVSDVTEFRVAGRKVYLSPVMDLFDRSIVAHTVATSPSTALTTDSLS
KAIAACEPEPGWMIHTDQGFQYQHASWRDLIGDNGGVQSMSRKANCYDNAVMENFFGHLKTEMYHGEVFDTVAEFNQVID
EYIQWYNTERIQQRLKGLTPMQYRNQTLEALTA
>Mature_273_residues
MEYLLQAAGIPRSTFFYHQKRLSKPDKHAELKDAIRASFERNKHRYGYRRVLLDLRNQGWVVNHKLVYKLMCEMGLRAKI
RQRRPYVSYTGTISHIADNKLDRKFTPDQPNTVFVSDVTEFRVAGRKVYLSPVMDLFDRSIVAHTVATSPSTALTTDSLS
KAIAACEPEPGWMIHTDQGFQYQHASWRDLIGDNGGVQSMSRKANCYDNAVMENFFGHLKTEMYHGEVFDTVAEFNQVID
EYIQWYNTERIQQRLKGLTPMQYRNQTLEALTA

Specific function: Involved in the transposition of the insertion sequence IS150 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=202, Percent_Identity=28.2178217821782, Blast_Score=86, Evalue=3e-17,
Organism=Escherichia coli, GI1789981, Length=267, Percent_Identity=45.6928838951311, Blast_Score=257, Evalue=7e-70,
Organism=Escherichia coli, GI1788405, Length=264, Percent_Identity=30.6818181818182, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1787263, Length=264, Percent_Identity=30.6818181818182, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1786753, Length=264, Percent_Identity=30.6818181818182, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1786570, Length=264, Percent_Identity=30.6818181818182, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1786490, Length=264, Percent_Identity=30.6818181818182, Blast_Score=127, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 31654; Mature: 31654

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYLLQAAGIPRSTFFYHQKRLSKPDKHAELKDAIRASFERNKHRYGYRRVLLDLRNQGW
CCHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VVNHKLVYKLMCEMGLRAKIRQRRPYVSYTGTISHIADNKLDRKFTPDQPNTVFVSDVTE
EEHHHHHHHHHHHHCHHHHHHHCCCCEEECCHHHHHHCCCCCCCCCCCCCCEEEEECHHH
FRVAGRKVYLSPVMDLFDRSIVAHTVATSPSTALTTDSLSKAIAACEPEPGWMIHTDQGF
HHHCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCC
QYQHASWRDLIGDNGGVQSMSRKANCYDNAVMENFFGHLKTEMYHGEVFDTVAEFNQVID
CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EYIQWYNTERIQQRLKGLTPMQYRNQTLEALTA
HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MEYLLQAAGIPRSTFFYHQKRLSKPDKHAELKDAIRASFERNKHRYGYRRVLLDLRNQGW
CCHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VVNHKLVYKLMCEMGLRAKIRQRRPYVSYTGTISHIADNKLDRKFTPDQPNTVFVSDVTE
EEHHHHHHHHHHHHCHHHHHHHCCCCEEECCHHHHHHCCCCCCCCCCCCCCEEEEECHHH
FRVAGRKVYLSPVMDLFDRSIVAHTVATSPSTALTTDSLSKAIAACEPEPGWMIHTDQGF
HHHCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCC
QYQHASWRDLIGDNGGVQSMSRKANCYDNAVMENFFGHLKTEMYHGEVFDTVAEFNQVID
CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EYIQWYNTERIQQRLKGLTPMQYRNQTLEALTA
HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2841644; 2541046; 8041620; 9278503 [H]