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The map label for this gene is yddH [H]

Identifier: 68536768

GI number: 68536768

Start: 1956222

End: 1957142

Strand: Direct

Name: yddH [H]

Synonym: jk1678

Alternate gene names: 68536768

Gene position: 1956222-1957142 (Clockwise)

Preceding gene: 68536767

Following gene: 68536769

Centisome position: 79.44

GC content: 65.36

Gene sequence:

>921_bases
GTGCTGGACATAGCGAGCCTCGTGGCCCCACTGGCCGCGGTGATTCCCTCGCCTTTTAGCCCAGGGCTTAGCGCCAGCGT
TTCCGGGGTAAAAGGCCTGGAAAATCTGGGAGACTTGGCGGCCTCCGCCCTGCAGGGGCGGGCCGGTGACAACGTCCACG
GCTCCCTGGACTCGGTGTCCAAGGTCGTTTCCCAGGCTTTAGGTGCGGGCGGTGCACTGGACAAGCTTGCCGGACAGGCA
GCCCAGGCCGTAGAGCGGGCTATTGGGGACCTGGGCAGTGTCTTCGACGACTGCGTGCGGGAGGTCGGCCACGCAGTGGC
TACCAGCGGTGTTGCTGGCCCACTGGGAATGGTGAATGGTCTCGGCGCGGCGATGCCGGTGGTGCTGCGACACATTGGGC
GGGCGGAAGATCGCATGCACAAACTAGAGGAAGAGCTGCGAGGGCTAACTCTGGATGTTCACCAGGTGAAGAAGGACCAG
ATTCCCGAGCGGCTGCCTGTCCGTAACCCGGATACGGCAGAGGTTGCGGCGCCGGCGTCACAAGATAGCCACAGCGCGCC
GGGCGCACCAACGGAACAAGCGCGGAAAGCGGTAGCCGCGGCGAAGACAGCCCTGGGCACCCCGTATCAGTGGGGTGGGA
CGGTGCCAGGCAAGGGGCTGGACTGCAGTGGCCTGGTGCAATGGGCCTACCAGCAGGCTGGGGTGGATCTGCCGCGGACG
GCAAGCGCGCAGGCAGTCGGGCCACAGATTTCTCGCGCGGAGCTGCAAGCAGGCGACTTGGCGGTGTGGGACGGGCACGT
GGCGATGATCGTCGACGGAGGAAACATGATCGAGGCTGGCGACCCGGTGCAGATCAGCCCGATCCGGCAAGAGAATATCG
GAATGCCGTTCAAGGGCTTTTACCGGCCGACGGCGGCCTAA

Upstream 100 bases:

>100_bases
TTTAATGACGCCACGTTTGCCCTGGGTAGCGTTCACCGCGGACTAGACGAACACGAGGGCGAATACTCCCACGCCTTCAG
CGGGTTGAAGGAGGTCTGAA

Downstream 100 bases:

>100_bases
GTAGACAGGCACAGGCGAAAAGAGGAAACATGCCACTCATCAACGGACGATCCCACGGCAGCGGCTTGGCGCGCATCGTG
AGCACTCCCCCACCGCGCGA

Product: putative secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLDIASLVAPLAAVIPSPFSPGLSASVSGVKGLENLGDLAASALQGRAGDNVHGSLDSVSKVVSQALGAGGALDKLAGQA
AQAVERAIGDLGSVFDDCVREVGHAVATSGVAGPLGMVNGLGAAMPVVLRHIGRAEDRMHKLEEELRGLTLDVHQVKKDQ
IPERLPVRNPDTAEVAAPASQDSHSAPGAPTEQARKAVAAAKTALGTPYQWGGTVPGKGLDCSGLVQWAYQQAGVDLPRT
ASAQAVGPQISRAELQAGDLAVWDGHVAMIVDGGNMIEAGDPVQISPIRQENIGMPFKGFYRPTAA

Sequences:

>Translated_306_residues
MLDIASLVAPLAAVIPSPFSPGLSASVSGVKGLENLGDLAASALQGRAGDNVHGSLDSVSKVVSQALGAGGALDKLAGQA
AQAVERAIGDLGSVFDDCVREVGHAVATSGVAGPLGMVNGLGAAMPVVLRHIGRAEDRMHKLEEELRGLTLDVHQVKKDQ
IPERLPVRNPDTAEVAAPASQDSHSAPGAPTEQARKAVAAAKTALGTPYQWGGTVPGKGLDCSGLVQWAYQQAGVDLPRT
ASAQAVGPQISRAELQAGDLAVWDGHVAMIVDGGNMIEAGDPVQISPIRQENIGMPFKGFYRPTAA
>Mature_306_residues
MLDIASLVAPLAAVIPSPFSPGLSASVSGVKGLENLGDLAASALQGRAGDNVHGSLDSVSKVVSQALGAGGALDKLAGQA
AQAVERAIGDLGSVFDDCVREVGHAVATSGVAGPLGMVNGLGAAMPVVLRHIGRAEDRMHKLEEELRGLTLDVHQVKKDQ
IPERLPVRNPDTAEVAAPASQDSHSAPGAPTEQARKAVAAAKTALGTPYQWGGTVPGKGLDCSGLVQWAYQQAGVDLPRT
ASAQAVGPQISRAELQAGDLAVWDGHVAMIVDGGNMIEAGDPVQISPIRQENIGMPFKGFYRPTAA

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60; PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 31256; Mature: 31256

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDIASLVAPLAAVIPSPFSPGLSASVSGVKGLENLGDLAASALQGRAGDNVHGSLDSVS
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
KVVSQALGAGGALDKLAGQAAQAVERAIGDLGSVFDDCVREVGHAVATSGVAGPLGMVNG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LGAAMPVVLRHIGRAEDRMHKLEEELRGLTLDVHQVKKDQIPERLPVRNPDTAEVAAPAS
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCC
QDSHSAPGAPTEQARKAVAAAKTALGTPYQWGGTVPGKGLDCSGLVQWAYQQAGVDLPRT
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
ASAQAVGPQISRAELQAGDLAVWDGHVAMIVDGGNMIEAGDPVQISPIRQENIGMPFKGF
CCCHHCCCCHHHHHHCCCCEEEECCEEEEEEECCCEECCCCCEEECCCCHHCCCCCCCCC
YRPTAA
CCCCCC
>Mature Secondary Structure
MLDIASLVAPLAAVIPSPFSPGLSASVSGVKGLENLGDLAASALQGRAGDNVHGSLDSVS
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
KVVSQALGAGGALDKLAGQAAQAVERAIGDLGSVFDDCVREVGHAVATSGVAGPLGMVNG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LGAAMPVVLRHIGRAEDRMHKLEEELRGLTLDVHQVKKDQIPERLPVRNPDTAEVAAPAS
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCC
QDSHSAPGAPTEQARKAVAAAKTALGTPYQWGGTVPGKGLDCSGLVQWAYQQAGVDLPRT
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
ASAQAVGPQISRAELQAGDLAVWDGHVAMIVDGGNMIEAGDPVQISPIRQENIGMPFKGF
CCCHHCCCCHHHHHHCCCCEEEECCEEEEEEECCCEECCCCCEEECCCCHHCCCCCCCCC
YRPTAA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]