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The map label for this gene is lytR [H]

Identifier: 68536736

GI number: 68536736

Start: 1926347

End: 1928014

Strand: Direct

Name: lytR [H]

Synonym: jk1648

Alternate gene names: 68536736

Gene position: 1926347-1928014 (Clockwise)

Preceding gene: 68536730

Following gene: 68536737

Centisome position: 78.23

GC content: 64.51

Gene sequence:

>1668_bases
ATGACAGAGCAGACAGGGCATCAGAGAAGCCGCCACTCGCGGCGCATTCAGGCAGCTCCCGGAGGTGTAGAGGCCAAGCA
GATCGGCCCTGGCTGGACGCGCGGGGTGCTGGCTGCGGTCTCGGCTCTTGCACTGGTCGTGATGGGTATCGGCTACATGG
CGGTCGGCAACCTTAACGACGGACTAGCCCAGGCTAACAACCTGAACCTCGGCAGCCAGCCGGACGGTGCGACTGACATC
CTGCTCGTGGGCGTGGACTCCCGTACGGACGCGAAGGGCAACCCGCTGTCCCAGAAGGAGATCGACATGCTCCGTGCCGG
CGAAGAAGAGGCTACAAACACGGACACGATGATCCTCATTCGCATCCCGAACGATGGTTCCTCGGCGACCGCGGTCTCGC
TGCCCCGCGACACGTACGTCAGCACCCCTGACAACGGCAACATGAAGCTCAACGGCGTGTACGGTACTGCCAAGTTCGAG
AAGTCGCAGGAGCTGGAGAAGGATGGCGACAACAGCAAGTCCGACATCGAGCAGAAGTCCACTGAAGCCGGCCGCCAGGC
GCTGATCAGCTCCGTGGCAGACCTCACCGGCATCACCGTCGACCACTACGCAGAGGTTGGCCTGTTGGGCTTCGTTCTGC
TCACCGACGCCGTCGGCGGCGTGGACGTGTGCCTGAAGGACAAGGTCGACGAGCCGCTGTCTGGCGCGAAGTTCAAGAAG
GGCCGCCAGACCCTCGACGGCCAGGACGCACTGAGCTTCGTCCGCCAGCGCCACGAACTGCCGCGCGGCGACCTGGACCG
CATCACCCGCCAGCAGGCCTACATGGCCAGCCTGGCCAACAAGGTGCTGTCCTCCAAAACGCTGACCGACCCAGGCAGCA
TGTCCAAGCTCAACGACGCGGTGCAGCGCTCCGTGGTACTCGACAGCGGCTGGGACGTCATGGGATTGGCCACGCAGATG
CAGAACATGGCCGGCGGCGATGTCAGCTTCCAGACCATCCCGGTCACCAGCATCGACGGCACCGGTGACTACGGCGAATC
CGTCGTGACGGTGGATAACGACCAGGTCCACAAGTTCTTCAAGGATCTGCTGGGCGACAAGCCGGGCGAAGAGAGCACTT
CCTCCGACAAGCCCGCCGACATCACCGACTACAAGGCCAAGGACTACAAGGTCAACGTCTTCAACGCCTCCGAGCAGGCC
GGTCTGGCCGCCCGCGTGTCGGATCTGGTGAAGGACTACGGTTACAAGCCGGGCAAGGTCGGCAACCACCCCGAGACAGG
CATTTCGGAGTCACAGGTGAACGCCAAGAACGCCGACGATCCGGCAGCTCGCGCTCTAGCCAAGCAGCTGGGCGGGCTGA
ACGTGGTGGAGGATTCCTCCCTAGACGAGCACGAGCTCTCCGTCACCCTGTCCGGCACCTACGCCGGCCCGGGCATCCTG
GAGCAGTCCGCCCCGCTGACCAAGCCGGACGACCCGAACGTCGGCACGCTCACCGAGGGAATCAAGGACCTCGACGGCGA
TGCCATCCCCGACGAGGGCACGTCCGCAACCCAGAACAGCACCGGCTCTGACAAGCCCGCCACCGTCGGCACGCCGGGTA
CCGGCCAGGGCACCGACCGAAAGGATCCGATCGACGCCGGCGGCGACGGTCCGATGTGTGTGAACTAA

Upstream 100 bases:

>100_bases
CGCAATAGGGCCCGGCCGACCTGACCGGAGGCTCCGAAAACCAAAACACTCATAAAATCAGTACTACACCAGCGCCATCT
TTGCCGCTAAAGTGTAAACA

Downstream 100 bases:

>100_bases
TGGATATTATCGCCCCACTCGTAGCCCAGGATCCGGCCAGCCCGCGCCTGACCACCTACACTCCGGCCGGCCGCATGGAG
CTGTCCGCCCAGACCCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MTEQTGHQRSRHSRRIQAAPGGVEAKQIGPGWTRGVLAAVSALALVVMGIGYMAVGNLNDGLAQANNLNLGSQPDGATDI
LLVGVDSRTDAKGNPLSQKEIDMLRAGEEEATNTDTMILIRIPNDGSSATAVSLPRDTYVSTPDNGNMKLNGVYGTAKFE
KSQELEKDGDNSKSDIEQKSTEAGRQALISSVADLTGITVDHYAEVGLLGFVLLTDAVGGVDVCLKDKVDEPLSGAKFKK
GRQTLDGQDALSFVRQRHELPRGDLDRITRQQAYMASLANKVLSSKTLTDPGSMSKLNDAVQRSVVLDSGWDVMGLATQM
QNMAGGDVSFQTIPVTSIDGTGDYGESVVTVDNDQVHKFFKDLLGDKPGEESTSSDKPADITDYKAKDYKVNVFNASEQA
GLAARVSDLVKDYGYKPGKVGNHPETGISESQVNAKNADDPAARALAKQLGGLNVVEDSSLDEHELSVTLSGTYAGPGIL
EQSAPLTKPDDPNVGTLTEGIKDLDGDAIPDEGTSATQNSTGSDKPATVGTPGTGQGTDRKDPIDAGGDGPMCVN

Sequences:

>Translated_555_residues
MTEQTGHQRSRHSRRIQAAPGGVEAKQIGPGWTRGVLAAVSALALVVMGIGYMAVGNLNDGLAQANNLNLGSQPDGATDI
LLVGVDSRTDAKGNPLSQKEIDMLRAGEEEATNTDTMILIRIPNDGSSATAVSLPRDTYVSTPDNGNMKLNGVYGTAKFE
KSQELEKDGDNSKSDIEQKSTEAGRQALISSVADLTGITVDHYAEVGLLGFVLLTDAVGGVDVCLKDKVDEPLSGAKFKK
GRQTLDGQDALSFVRQRHELPRGDLDRITRQQAYMASLANKVLSSKTLTDPGSMSKLNDAVQRSVVLDSGWDVMGLATQM
QNMAGGDVSFQTIPVTSIDGTGDYGESVVTVDNDQVHKFFKDLLGDKPGEESTSSDKPADITDYKAKDYKVNVFNASEQA
GLAARVSDLVKDYGYKPGKVGNHPETGISESQVNAKNADDPAARALAKQLGGLNVVEDSSLDEHELSVTLSGTYAGPGIL
EQSAPLTKPDDPNVGTLTEGIKDLDGDAIPDEGTSATQNSTGSDKPATVGTPGTGQGTDRKDPIDAGGDGPMCVN
>Mature_554_residues
TEQTGHQRSRHSRRIQAAPGGVEAKQIGPGWTRGVLAAVSALALVVMGIGYMAVGNLNDGLAQANNLNLGSQPDGATDIL
LVGVDSRTDAKGNPLSQKEIDMLRAGEEEATNTDTMILIRIPNDGSSATAVSLPRDTYVSTPDNGNMKLNGVYGTAKFEK
SQELEKDGDNSKSDIEQKSTEAGRQALISSVADLTGITVDHYAEVGLLGFVLLTDAVGGVDVCLKDKVDEPLSGAKFKKG
RQTLDGQDALSFVRQRHELPRGDLDRITRQQAYMASLANKVLSSKTLTDPGSMSKLNDAVQRSVVLDSGWDVMGLATQMQ
NMAGGDVSFQTIPVTSIDGTGDYGESVVTVDNDQVHKFFKDLLGDKPGEESTSSDKPADITDYKAKDYKVNVFNASEQAG
LAARVSDLVKDYGYKPGKVGNHPETGISESQVNAKNADDPAARALAKQLGGLNVVEDSSLDEHELSVTLSGTYAGPGILE
QSAPLTKPDDPNVGTLTEGIKDLDGDAIPDEGTSATQNSTGSDKPATVGTPGTGQGTDRKDPIDAGGDGPMCVN

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 58338; Mature: 58207

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQTGHQRSRHSRRIQAAPGGVEAKQIGPGWTRGVLAAVSALALVVMGIGYMAVGNLND
CCCCCCHHHHHHHCEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCH
GLAQANNLNLGSQPDGATDILLVGVDSRTDAKGNPLSQKEIDMLRAGEEEATNTDTMILI
HHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHCCCCCCEEEE
RIPNDGSSATAVSLPRDTYVSTPDNGNMKLNGVYGTAKFEKSQELEKDGDNSKSDIEQKS
EECCCCCCCEEEECCCCCEECCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHH
TEAGRQALISSVADLTGITVDHYAEVGLLGFVLLTDAVGGVDVCLKDKVDEPLSGAKFKK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCHHHH
GRQTLDGQDALSFVRQRHELPRGDLDRITRQQAYMASLANKVLSSKTLTDPGSMSKLNDA
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
VQRSVVLDSGWDVMGLATQMQNMAGGDVSFQTIPVTSIDGTGDYGESVVTVDNDQVHKFF
HHHHEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCEEEEECCHHHHHHH
KDLLGDKPGEESTSSDKPADITDYKAKDYKVNVFNASEQAGLAARVSDLVKDYGYKPGKV
HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHCCHHHHHHHHHHHCCCCCCCC
GNHPETGISESQVNAKNADDPAARALAKQLGGLNVVEDSSLDEHELSVTLSGTYAGPGIL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCCC
EQSAPLTKPDDPNVGTLTEGIKDLDGDAIPDEGTSATQNSTGSDKPATVGTPGTGQGTDR
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KDPIDAGGDGPMCVN
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEQTGHQRSRHSRRIQAAPGGVEAKQIGPGWTRGVLAAVSALALVVMGIGYMAVGNLND
CCCCCHHHHHHHCEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCH
GLAQANNLNLGSQPDGATDILLVGVDSRTDAKGNPLSQKEIDMLRAGEEEATNTDTMILI
HHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHCCCCCCEEEE
RIPNDGSSATAVSLPRDTYVSTPDNGNMKLNGVYGTAKFEKSQELEKDGDNSKSDIEQKS
EECCCCCCCEEEECCCCCEECCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHH
TEAGRQALISSVADLTGITVDHYAEVGLLGFVLLTDAVGGVDVCLKDKVDEPLSGAKFKK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCHHHH
GRQTLDGQDALSFVRQRHELPRGDLDRITRQQAYMASLANKVLSSKTLTDPGSMSKLNDA
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
VQRSVVLDSGWDVMGLATQMQNMAGGDVSFQTIPVTSIDGTGDYGESVVTVDNDQVHKFF
HHHHEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCEEEEECCHHHHHHH
KDLLGDKPGEESTSSDKPADITDYKAKDYKVNVFNASEQAGLAARVSDLVKDYGYKPGKV
HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHCCHHHHHHHHHHHCCCCCCCC
GNHPETGISESQVNAKNADDPAARALAKQLGGLNVVEDSSLDEHELSVTLSGTYAGPGIL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCCC
EQSAPLTKPDDPNVGTLTEGIKDLDGDAIPDEGTSATQNSTGSDKPATVGTPGTGQGTDR
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KDPIDAGGDGPMCVN
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12721630 [H]