| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is merA [H]
Identifier: 68536528
GI number: 68536528
Start: 1699014
End: 1700435
Strand: Direct
Name: merA [H]
Synonym: jk1442
Alternate gene names: 68536528
Gene position: 1699014-1700435 (Clockwise)
Preceding gene: 68536526
Following gene: 68536529
Centisome position: 69.0
GC content: 71.52
Gene sequence:
>1422_bases ATGCCTACGAAGTACGATCTCGCCATCATCGGATCGGGAGGCGGCGCGTTCGCCGCTGCGATCCGCGCCAGCACGCTCGG GAAGTCGGTGGTGATGATCGAGCGCGGGACGCTCGGCGGCACCTGCGTGAACACGGGCTGCGTCCCGTCGAAGGCGCTCA TTGCCGCGGCCGGCGCGCGGCACGTCGCGGTCGACGCCGCAACCCGGTTCCCCGGGATCGCGACGACGGCGGATCCCGTC GACATGCCCGCGCTGATCGCTGGGAAGCAAGCGTTGGTGGAGTCGCTGCGCGGCGAGAAGTACGCCGACGTCGCCGACTC CTACGGCTGGCAGGTCCTCCGCGGCGACGCCTCGTTCGTGGGCACCCCTGATGCGCCGGTTCTCGATGTTGCCGGATCCG ACGGAAGCGTCGAGACCATCGAGGCCCACCACTACCTGGTCGCGACTGGTTCTCGCCCGTGGGCACCGCCGATCGACGGC CTGGAGGAGACCGGATACCTGACCTCGACCACGGCGATGGAGCTGACGGAGGTCCCCGAGTCGCTGCTGGTGCTCGGCGG CGGCTACGTCGCCCTGGAGCAGGCGCAGCTGTTCGCCCGCCTCGGCTCGCAGGTCACGCTGCTCGTGCGGTCCCGGCTCG CCTCGAAGGAGGAGCCGGAGGTGTCGAAGGCGCTCCAGGAGGTGTTCGCCGACGAGGGCATCCGCGTCGTCAGCCGCGCA GTGCCCACCCGGGTCTCCCGCGGCACGGGAGGCGAGGCCGTCGTGACCGCCGCCTTGTCCGGCGGCTCGCAGGAGTTCCG CGCCGACCAGGTCCTGGTCGCCCTCGGACGCCGTCCCGTCACCGATGGCCTGAACCTCGATGCGGTCGGGGTGAATACCG GAGACTCCGGCGAGGTGGTCGTCTCCGACCGGCTGCAGTCCTCGAACCCGCGGGTCTGGGCCGCGGGCGACGTGACCGGG CACCCCGAGTTCGTCTACGTCGCCGCCCACCACGGCACCCTCGTCGCCGAGAACGCGTTCGCCGACGCCGACCGGTCCGT CGACTACGCCCGCCTGCCGCGGGTGACGTTCACCGGGACCGCGATCGGCGCGGTCGGGATGACCGAGAAGGACGTCCTCG CCGCGGGGATCCGCTGCGACTGCCGCGTCCTGCCCCTGCACCACGTGCCCCGCGCCTTGGTGAACCGCGACACCCGCGGG TTCATCAAGATCGTCGTGAACGCCGAGACGAAAGAGATCCTCGGCCTGACCGCCGTCGCCAAGGACGCCGGGGAGCTCGC CGCCGCAGGCGTCCACGTGCTCGGCAGGACCGTCGCCGAGGTCGCCAACGCCTGGGCCCCCTACCTGACCATGGCCGAGG GCATCCGGATCGCCGCGAAGGCCTTCACCACCGACCCGTCGCTGCTGTCGTGCTGCGCATGA
Upstream 100 bases:
>100_bases ATTGCTGTCTCCCTCCGTGGCCGCGCTTGACCTTCCCCTGCACTGGAAGGTCCAGTATGGCTGAGACAGAGCAGAAAGCC AAGAGTTGACAGGAGTAGCG
Downstream 100 bases:
>100_bases ACGGCAACGCAGGCAATCGGGGAGATCTCATCCTGAAGCAGACGATGAGCGCCGATCAGGACCGCGACGAATGGCGCGCC GGTCCCGTCGTCGCTGCAGT
Product: putative mercuric reductase
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MPTKYDLAIIGSGGGAFAAAIRASTLGKSVVMIERGTLGGTCVNTGCVPSKALIAAAGARHVAVDAATRFPGIATTADPV DMPALIAGKQALVESLRGEKYADVADSYGWQVLRGDASFVGTPDAPVLDVAGSDGSVETIEAHHYLVATGSRPWAPPIDG LEETGYLTSTTAMELTEVPESLLVLGGGYVALEQAQLFARLGSQVTLLVRSRLASKEEPEVSKALQEVFADEGIRVVSRA VPTRVSRGTGGEAVVTAALSGGSQEFRADQVLVALGRRPVTDGLNLDAVGVNTGDSGEVVVSDRLQSSNPRVWAAGDVTG HPEFVYVAAHHGTLVAENAFADADRSVDYARLPRVTFTGTAIGAVGMTEKDVLAAGIRCDCRVLPLHHVPRALVNRDTRG FIKIVVNAETKEILGLTAVAKDAGELAAAGVHVLGRTVAEVANAWAPYLTMAEGIRIAAKAFTTDPSLLSCCA
Sequences:
>Translated_473_residues MPTKYDLAIIGSGGGAFAAAIRASTLGKSVVMIERGTLGGTCVNTGCVPSKALIAAAGARHVAVDAATRFPGIATTADPV DMPALIAGKQALVESLRGEKYADVADSYGWQVLRGDASFVGTPDAPVLDVAGSDGSVETIEAHHYLVATGSRPWAPPIDG LEETGYLTSTTAMELTEVPESLLVLGGGYVALEQAQLFARLGSQVTLLVRSRLASKEEPEVSKALQEVFADEGIRVVSRA VPTRVSRGTGGEAVVTAALSGGSQEFRADQVLVALGRRPVTDGLNLDAVGVNTGDSGEVVVSDRLQSSNPRVWAAGDVTG HPEFVYVAAHHGTLVAENAFADADRSVDYARLPRVTFTGTAIGAVGMTEKDVLAAGIRCDCRVLPLHHVPRALVNRDTRG FIKIVVNAETKEILGLTAVAKDAGELAAAGVHVLGRTVAEVANAWAPYLTMAEGIRIAAKAFTTDPSLLSCCA >Mature_472_residues PTKYDLAIIGSGGGAFAAAIRASTLGKSVVMIERGTLGGTCVNTGCVPSKALIAAAGARHVAVDAATRFPGIATTADPVD MPALIAGKQALVESLRGEKYADVADSYGWQVLRGDASFVGTPDAPVLDVAGSDGSVETIEAHHYLVATGSRPWAPPIDGL EETGYLTSTTAMELTEVPESLLVLGGGYVALEQAQLFARLGSQVTLLVRSRLASKEEPEVSKALQEVFADEGIRVVSRAV PTRVSRGTGGEAVVTAALSGGSQEFRADQVLVALGRRPVTDGLNLDAVGVNTGDSGEVVVSDRLQSSNPRVWAAGDVTGH PEFVYVAAHHGTLVAENAFADADRSVDYARLPRVTFTGTAIGAVGMTEKDVLAAGIRCDCRVLPLHHVPRALVNRDTRGF IKIVVNAETKEILGLTAVAKDAGELAAAGVHVLGRTVAEVANAWAPYLTMAEGIRIAAKAFTTDPSLLSCCA
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=481, Percent_Identity=29.9376299376299, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI22035672, Length=491, Percent_Identity=30.7535641547862, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI50301238, Length=426, Percent_Identity=28.8732394366197, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI148277065, Length=431, Percent_Identity=27.6102088167053, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI33519430, Length=431, Percent_Identity=27.6102088167053, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI33519428, Length=431, Percent_Identity=27.6102088167053, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI33519426, Length=431, Percent_Identity=27.6102088167053, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI148277071, Length=431, Percent_Identity=27.6102088167053, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI291045266, Length=449, Percent_Identity=27.6169265033408, Blast_Score=129, Evalue=9e-30, Organism=Homo sapiens, GI291045268, Length=438, Percent_Identity=28.5388127853881, Blast_Score=111, Evalue=1e-24, Organism=Escherichia coli, GI1786307, Length=467, Percent_Identity=30.1927194860814, Blast_Score=182, Evalue=3e-47, Organism=Escherichia coli, GI1789915, Length=372, Percent_Identity=36.5591397849462, Blast_Score=181, Evalue=1e-46, Organism=Escherichia coli, GI87081717, Length=458, Percent_Identity=29.0393013100437, Blast_Score=174, Evalue=8e-45, Organism=Escherichia coli, GI87082354, Length=479, Percent_Identity=28.8100208768267, Blast_Score=160, Evalue=1e-40, Organism=Caenorhabditis elegans, GI32565766, Length=461, Percent_Identity=32.9718004338395, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17557007, Length=500, Percent_Identity=27.4, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71983419, Length=361, Percent_Identity=29.3628808864266, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71983429, Length=361, Percent_Identity=29.3628808864266, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI71982272, Length=458, Percent_Identity=27.7292576419214, Blast_Score=127, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6321091, Length=478, Percent_Identity=29.9163179916318, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6325166, Length=476, Percent_Identity=26.4705882352941, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6325240, Length=481, Percent_Identity=27.2349272349272, Blast_Score=122, Evalue=1e-28, Organism=Drosophila melanogaster, GI21358499, Length=465, Percent_Identity=32.4731182795699, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI17737741, Length=491, Percent_Identity=28.7169042769857, Blast_Score=145, Evalue=8e-35, Organism=Drosophila melanogaster, GI24640549, Length=501, Percent_Identity=27.3453093812375, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI24640553, Length=501, Percent_Identity=27.3453093812375, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI24640551, Length=501, Percent_Identity=26.7465069860279, Blast_Score=135, Evalue=6e-32,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 49003; Mature: 48872
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTKYDLAIIGSGGGAFAAAIRASTLGKSVVMIERGTLGGTCVNTGCVPSKALIAAAGAR CCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCHHHHHHCCCC HVAVDAATRFPGIATTADPVDMPALIAGKQALVESLRGEKYADVADSYGWQVLRGDASFV EEEEEHHHCCCCCCCCCCCCCCCHHHHCHHHHHHHHCCCCHHHHHHCCCCEEEECCCCCC GTPDAPVLDVAGSDGSVETIEAHHYLVATGSRPWAPPIDGLEETGYLTSTTAMELTEVPE CCCCCCEEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHCCC SLLVLGGGYVALEQAQLFARLGSQVTLLVRSRLASKEEPEVSKALQEVFADEGIRVVSRA EEEEECCCEEEHHHHHHHHHCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHH VPTRVSRGTGGEAVVTAALSGGSQEFRADQVLVALGRRPVTDGLNLDAVGVNTGDSGEVV HCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEE VSDRLQSSNPRVWAAGDVTGHPEFVYVAAHHGTLVAENAFADADRSVDYARLPRVTFTGT EECCCCCCCCCEEEECCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCHHHCCCEEEECC AIGAVGMTEKDVLAAGIRCDCRVLPLHHVPRALVNRDTRGFIKIVVNAETKEILGLTAVA EEEECCCCCHHHHHCCCCCCEEEECHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHH KDAGELAAAGVHVLGRTVAEVANAWAPYLTMAEGIRIAAKAFTTDPSLLSCCA HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHCC >Mature Secondary Structure PTKYDLAIIGSGGGAFAAAIRASTLGKSVVMIERGTLGGTCVNTGCVPSKALIAAAGAR CCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCHHHHHHCCCC HVAVDAATRFPGIATTADPVDMPALIAGKQALVESLRGEKYADVADSYGWQVLRGDASFV EEEEEHHHCCCCCCCCCCCCCCCHHHHCHHHHHHHHCCCCHHHHHHCCCCEEEECCCCCC GTPDAPVLDVAGSDGSVETIEAHHYLVATGSRPWAPPIDGLEETGYLTSTTAMELTEVPE CCCCCCEEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHCCC SLLVLGGGYVALEQAQLFARLGSQVTLLVRSRLASKEEPEVSKALQEVFADEGIRVVSRA EEEEECCCEEEHHHHHHHHHCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHH VPTRVSRGTGGEAVVTAALSGGSQEFRADQVLVALGRRPVTDGLNLDAVGVNTGDSGEVV HCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEE VSDRLQSSNPRVWAAGDVTGHPEFVYVAAHHGTLVAENAFADADRSVDYARLPRVTFTGT EECCCCCCCCCEEEECCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCHHHCCCEEEECC AIGAVGMTEKDVLAAGIRCDCRVLPLHHVPRALVNRDTRGFIKIVVNAETKEILGLTAVA EEEECCCCCHHHHHCCCCCCEEEECHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHH KDAGELAAAGVHVLGRTVAEVANAWAPYLTMAEGIRIAAKAFTTDPSLLSCCA HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1494353 [H]