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The map label for this gene is tnp3511c [H]

Identifier: 68536344

GI number: 68536344

Start: 1485156

End: 1485944

Strand: Direct

Name: tnp3511c [H]

Synonym: jk1264

Alternate gene names: 68536344

Gene position: 1485156-1485944 (Clockwise)

Preceding gene: 68536339

Following gene: 68536345

Centisome position: 60.31

GC content: 53.87

Gene sequence:

>789_bases
ATGGACTACAGCGACTGGACCATCGCTGGCCACCAACGCGTCGTTATCCTCACAATCCTCGACGACCACTCACGCTACGT
ACTACGCTGCCAAGCGTTTAACAGCGCAACCGTCACCCATGTCATTGAAGCCTTCGCCTACACAGCCGCTATCCACGGTT
ACCCACAATCAACCCTGACCGACAACGGACGAGCATTCACAACCAGCAACGACCGCACCAACCCAGCACGCAATGGCTTC
GAACAACTCCTCCTAGACCTAGGGATTGAACAGAAAAACGGCAGACCCTATCACCCACAAACCCAAGGCAAAGTTGAACG
CTTCCACTACACGCTCAAACTGGCACTACGCAACAAACCCCAAGCTAGAGACATCGACAACCTCAACGAACAACTCGATG
ACATTATCGACTACTACAACAACAAACGCCCCCACCGAGCGCTCAACCGATGTACCCCTGCAGAGGCCTACAACGCTTTA
CCCAAAGCGCACCCCCGCCCTGGCGCCAAGACTCATGACTACCGCCTACGCACCGACAAAGTCGCCAAAAACGGCAAAAC
AACACTGCGATGGGGCGGACAACTCAGACGCATCTATATCGGACGCCGATGGACCGGAGAACCCATCACCATCATGTGCG
TAGACAACACAGCGGACATCAAAATCACCGCCACGGGGCAACATATAGCCCACTACACACTGACACCTGACAAGATCTAC
TACAACCAAAAAGACAACGAACTCAACCCCAACCCGGGCAACAAGAATAGAGAAAGCCCCGGGACATAA

Upstream 100 bases:

>100_bases
CAAATTTTCTTGGCATGTTCCAGATTTTCCCATCTACTCAAACGGAACAAAACCTGGGACACTTCAATTCCAAGCAGACC
AACCCAACGAAACATGGCAA

Downstream 100 bases:

>100_bases
CCGGAACGATGTCTCGAGACATCACATCTTGCCCAGCACGGGATTGCCGCTTCCACCGGAACTGTCGGGGATTCTGATGA
CAATGCTCTGGCAGAAAACG

Product: transposase for IS3511c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MDYSDWTIAGHQRVVILTILDDHSRYVLRCQAFNSATVTHVIEAFAYTAAIHGYPQSTLTDNGRAFTTSNDRTNPARNGF
EQLLLDLGIEQKNGRPYHPQTQGKVERFHYTLKLALRNKPQARDIDNLNEQLDDIIDYYNNKRPHRALNRCTPAEAYNAL
PKAHPRPGAKTHDYRLRTDKVAKNGKTTLRWGGQLRRIYIGRRWTGEPITIMCVDNTADIKITATGQHIAHYTLTPDKIY
YNQKDNELNPNPGNKNRESPGT

Sequences:

>Translated_262_residues
MDYSDWTIAGHQRVVILTILDDHSRYVLRCQAFNSATVTHVIEAFAYTAAIHGYPQSTLTDNGRAFTTSNDRTNPARNGF
EQLLLDLGIEQKNGRPYHPQTQGKVERFHYTLKLALRNKPQARDIDNLNEQLDDIIDYYNNKRPHRALNRCTPAEAYNAL
PKAHPRPGAKTHDYRLRTDKVAKNGKTTLRWGGQLRRIYIGRRWTGEPITIMCVDNTADIKITATGQHIAHYTLTPDKIY
YNQKDNELNPNPGNKNRESPGT
>Mature_262_residues
MDYSDWTIAGHQRVVILTILDDHSRYVLRCQAFNSATVTHVIEAFAYTAAIHGYPQSTLTDNGRAFTTSNDRTNPARNGF
EQLLLDLGIEQKNGRPYHPQTQGKVERFHYTLKLALRNKPQARDIDNLNEQLDDIIDYYNNKRPHRALNRCTPAEAYNAL
PKAHPRPGAKTHDYRLRTDKVAKNGKTTLRWGGQLRRIYIGRRWTGEPITIMCVDNTADIKITATGQHIAHYTLTPDKIY
YNQKDNELNPNPGNKNRESPGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786462, Length=193, Percent_Identity=32.1243523316062, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 29968; Mature: 29968

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYSDWTIAGHQRVVILTILDDHSRYVLRCQAFNSATVTHVIEAFAYTAAIHGYPQSTLT
CCCCCEEEECCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC
DNGRAFTTSNDRTNPARNGFEQLLLDLGIEQKNGRPYHPQTQGKVERFHYTLKLALRNKP
CCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC
QARDIDNLNEQLDDIIDYYNNKRPHRALNRCTPAEAYNALPKAHPRPGAKTHDYRLRTDK
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEHHH
VAKNGKTTLRWGGQLRRIYIGRRWTGEPITIMCVDNTADIKITATGQHIAHYTLTPDKIY
HHCCCCEEEEECCEEEEEEEECEECCCCEEEEEECCCCCEEEEECCCEEEEEEECCCEEE
YNQKDNELNPNPGNKNRESPGT
ECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDYSDWTIAGHQRVVILTILDDHSRYVLRCQAFNSATVTHVIEAFAYTAAIHGYPQSTLT
CCCCCEEEECCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC
DNGRAFTTSNDRTNPARNGFEQLLLDLGIEQKNGRPYHPQTQGKVERFHYTLKLALRNKP
CCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC
QARDIDNLNEQLDDIIDYYNNKRPHRALNRCTPAEAYNALPKAHPRPGAKTHDYRLRTDK
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEHHH
VAKNGKTTLRWGGQLRRIYIGRRWTGEPITIMCVDNTADIKITATGQHIAHYTLTPDKIY
HHCCCCEEEEECCEEEEEEEECEECCCCEEEEEECCCCCEEEEECCCEEEEEEECCCEEE
YNQKDNELNPNPGNKNRESPGT
ECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 8113168 [H]