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The map label for this gene is ydiU [C]

Identifier: 68536226

GI number: 68536226

Start: 1349612

End: 1350982

Strand: Direct

Name: ydiU [C]

Synonym: jk1150

Alternate gene names: 68536226

Gene position: 1349612-1350982 (Clockwise)

Preceding gene: 68536225

Following gene: 68536229

Centisome position: 54.81

GC content: 64.19

Gene sequence:

>1371_bases
ATGGCAATTCAGCCTACCCCTACAATGGGCAGCACTATGAATACGTTCGCCGAACAGTTCCCGGAACTCGCTCTCCCCTG
CACCGGGGAGGCCTTCCCCGACCCGCAGATCCTCGTGCTCAACGAGCCCCTCGCCGCCGAGCTGGGCTTGGATCCGCAGT
GGCTCCGCAGCCCCGAGGGCATTGCCTTCCTCACCGGCCAGCACGGAGGCCATGCACTCGGATACGCCGGCCACCAATTC
GGCCAGTTCAACCCCCGCATGGGCGATGGCCGCGCCCTCCTACTGTCTGAGCACACGGATCCCCAGGGAGAGGTCTGGGA
CATCCACGCCAAGGGCACTGGGCGCACCCCCTTCTCCCGCGGAGGTGACGGCCACTATCCCCTCGACGCCGCCCTCAAGG
AATATGCCTTCGCCGAGTCCCTTCACGCCCTGGGCGTCCCCACCTCCCGTTCGCTGGCCGTCCTCTCCACCGGTCGCACT
GTGCAGCGCCACCGCCTCCACCCGGGCGCGGTTGGTGTGCGCGTCGCCAGTTCCCATATTCGCATCGGCACCTTCCAATA
CGCCGCGCTCATGGGTCCACAGGTCACCGAACGCCTCGTCGATTACACACTCGCCCGCCACTTCCCGGATGCCTCGTCGC
CGCTCGATCTTTTTGACGCCACCGTCTCCCGCCAAGCCCAACTTGTCGCATCCTGGATGCGCTTCGGCTTTATCCACGGT
GTGATGAACACTGACAACATCGCAATTTCAGGGGAGACCATCGACTTCGGCCCGTGTGCCTTCATGGATTACTTCGCCAC
CGACACGGTGTACAGCTCGATCGATACCCGCGGTCGCTACGCTTACGCCCAGCAGCCCGCCGTCATGATGTGGAACCTTG
CACGCCTAGCTGAGGCTCTTGTGCCGCTGGTGGATGAGGGCGTCAAAAAATTTACAGAGCGCCTGCAGCGCTTCCAACTG
CAATATGCCGCGGCGTGGGACGAGCAGATGGCGGCCGCGCTGGGAGCCCCCAATTGCGCCGAACAGTTGCTAGACCTGCT
GCAGGTCGCGGCTCCTGACTACTGCGCGTTATTGGCTAACTTGACCCCGGGCGAAATCCCCCAGGGCTTGGAGCACACCC
CGGGCGCCGCAGAATGGACCGAGCGCTGGACGGCGCAGCACCCTCAACCGCGCAACCCCATCTACCTGCCCCGCAACCAC
GGCATGCAGGCGGCGCTTGAACAGGCCGAGGCTGGTGACCTTAGCCGCTACACGCTAGCTCTGGAGGCGCTTCGCAGCCC
GTTCGAATGGGACGATAAATACGAAAAACTCGGCCTCCATGCGGCGGTGCCGCGCGAGGAAGCCGAGTTCACGACCTACT
GCGGTACTTAG

Upstream 100 bases:

>100_bases
GATCACGTCGGCCGCCTGCAACGCGCGCATTCCACGCACCGTAATCAGGTCCCATGCCCCCGGCCCGCCGCCGATCAGCA
CCACTTTCCCTGTGTCACTC

Downstream 100 bases:

>100_bases
ACCAGCTTCAGGGCCTTCTGGGAACGATCCCACTGCTCGTTGAACAGGTTGGCATCCTTGGACAGGCGGGTGCCGTAGGA
AGGAATCATCTCCCGCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MAIQPTPTMGSTMNTFAEQFPELALPCTGEAFPDPQILVLNEPLAAELGLDPQWLRSPEGIAFLTGQHGGHALGYAGHQF
GQFNPRMGDGRALLLSEHTDPQGEVWDIHAKGTGRTPFSRGGDGHYPLDAALKEYAFAESLHALGVPTSRSLAVLSTGRT
VQRHRLHPGAVGVRVASSHIRIGTFQYAALMGPQVTERLVDYTLARHFPDASSPLDLFDATVSRQAQLVASWMRFGFIHG
VMNTDNIAISGETIDFGPCAFMDYFATDTVYSSIDTRGRYAYAQQPAVMMWNLARLAEALVPLVDEGVKKFTERLQRFQL
QYAAAWDEQMAAALGAPNCAEQLLDLLQVAAPDYCALLANLTPGEIPQGLEHTPGAAEWTERWTAQHPQPRNPIYLPRNH
GMQAALEQAEAGDLSRYTLALEALRSPFEWDDKYEKLGLHAAVPREEAEFTTYCGT

Sequences:

>Translated_456_residues
MAIQPTPTMGSTMNTFAEQFPELALPCTGEAFPDPQILVLNEPLAAELGLDPQWLRSPEGIAFLTGQHGGHALGYAGHQF
GQFNPRMGDGRALLLSEHTDPQGEVWDIHAKGTGRTPFSRGGDGHYPLDAALKEYAFAESLHALGVPTSRSLAVLSTGRT
VQRHRLHPGAVGVRVASSHIRIGTFQYAALMGPQVTERLVDYTLARHFPDASSPLDLFDATVSRQAQLVASWMRFGFIHG
VMNTDNIAISGETIDFGPCAFMDYFATDTVYSSIDTRGRYAYAQQPAVMMWNLARLAEALVPLVDEGVKKFTERLQRFQL
QYAAAWDEQMAAALGAPNCAEQLLDLLQVAAPDYCALLANLTPGEIPQGLEHTPGAAEWTERWTAQHPQPRNPIYLPRNH
GMQAALEQAEAGDLSRYTLALEALRSPFEWDDKYEKLGLHAAVPREEAEFTTYCGT
>Mature_455_residues
AIQPTPTMGSTMNTFAEQFPELALPCTGEAFPDPQILVLNEPLAAELGLDPQWLRSPEGIAFLTGQHGGHALGYAGHQFG
QFNPRMGDGRALLLSEHTDPQGEVWDIHAKGTGRTPFSRGGDGHYPLDAALKEYAFAESLHALGVPTSRSLAVLSTGRTV
QRHRLHPGAVGVRVASSHIRIGTFQYAALMGPQVTERLVDYTLARHFPDASSPLDLFDATVSRQAQLVASWMRFGFIHGV
MNTDNIAISGETIDFGPCAFMDYFATDTVYSSIDTRGRYAYAQQPAVMMWNLARLAEALVPLVDEGVKKFTERLQRFQLQ
YAAAWDEQMAAALGAPNCAEQLLDLLQVAAPDYCALLANLTPGEIPQGLEHTPGAAEWTERWTAQHPQPRNPIYLPRNHG
MQAALEQAEAGDLSRYTLALEALRSPFEWDDKYEKLGLHAAVPREEAEFTTYCGT

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=402, Percent_Identity=34.5771144278607, Blast_Score=191, Evalue=2e-48,
Organism=Escherichia coli, GI1787999, Length=468, Percent_Identity=31.6239316239316, Blast_Score=209, Evalue=4e-55,
Organism=Saccharomyces cerevisiae, GI6325034, Length=390, Percent_Identity=28.4615384615385, Blast_Score=150, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 50033; Mature: 49902

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQPTPTMGSTMNTFAEQFPELALPCTGEAFPDPQILVLNEPLAAELGLDPQWLRSPEG
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCHHHHCCCCC
IAFLTGQHGGHALGYAGHQFGQFNPRMGDGRALLLSEHTDPQGEVWDIHAKGTGRTPFSR
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCC
GGDGHYPLDAALKEYAFAESLHALGVPTSRSLAVLSTGRTVQRHRLHPGAVGVRVASSHI
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCEEEEECCEE
RIGTFQYAALMGPQVTERLVDYTLARHFPDASSPLDLFDATVSRQAQLVASWMRFGFIHG
EEEHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VMNTDNIAISGETIDFGPCAFMDYFATDTVYSSIDTRGRYAYAQQPAVMMWNLARLAEAL
CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH
VPLVDEGVKKFTERLQRFQLQYAAAWDEQMAAALGAPNCAEQLLDLLQVAAPDYCALLAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHC
LTPGEIPQGLEHTPGAAEWTERWTAQHPQPRNPIYLPRNHGMQAALEQAEAGDLSRYTLA
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHH
LEALRSPFEWDDKYEKLGLHAAVPREEAEFTTYCGT
HHHHCCCCCCCCHHHHCCCHHCCCCCCCCCEECCCC
>Mature Secondary Structure 
AIQPTPTMGSTMNTFAEQFPELALPCTGEAFPDPQILVLNEPLAAELGLDPQWLRSPEG
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCHHHHCCCCC
IAFLTGQHGGHALGYAGHQFGQFNPRMGDGRALLLSEHTDPQGEVWDIHAKGTGRTPFSR
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCC
GGDGHYPLDAALKEYAFAESLHALGVPTSRSLAVLSTGRTVQRHRLHPGAVGVRVASSHI
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCEEEEECCEE
RIGTFQYAALMGPQVTERLVDYTLARHFPDASSPLDLFDATVSRQAQLVASWMRFGFIHG
EEEHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VMNTDNIAISGETIDFGPCAFMDYFATDTVYSSIDTRGRYAYAQQPAVMMWNLARLAEAL
CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH
VPLVDEGVKKFTERLQRFQLQYAAAWDEQMAAALGAPNCAEQLLDLLQVAAPDYCALLAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHC
LTPGEIPQGLEHTPGAAEWTERWTAQHPQPRNPIYLPRNHGMQAALEQAEAGDLSRYTLA
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHH
LEALRSPFEWDDKYEKLGLHAAVPREEAEFTTYCGT
HHHHCCCCCCCCHHHHCCCHHCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA