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The map label for this gene is ypfJ [C]

Identifier: 68536119

GI number: 68536119

Start: 1229966

End: 1230805

Strand: Direct

Name: ypfJ [C]

Synonym: jk1042

Alternate gene names: 68536119

Gene position: 1229966-1230805 (Clockwise)

Preceding gene: 68536073

Following gene: 68536124

Centisome position: 49.95

GC content: 61.43

Gene sequence:

>840_bases
TTGTTCACCGGCCTGCTTTTTGGCGCCCTCGCCCGCCGCTTCGGCATTCCCGGAATCATCGTTGCCGCTGTTCTCGTGTT
CCTCTTCAACGGTGGATTGGGAATGCTGAGTGGGAACAACAGCGCGGATCAACGTGCGGGCGTCAGCAACAGTCGCACGG
GCGAAGGCTTCGAGCACTGCAAAACTGCCGAGGACGCCAACAACAATGACGATTGCCGTGTATTGGCCACGGCGAAGTCG
GTCGACCAGTTCTGGAGCTCGGCTCTGCCCGAGGAGGCTGGCAAGAAGTACAGCGAGCCGGGCCTGGTGCTCGCCGAGGG
GCAGACCAGCACCCGCTGTGGCTCTGCGAACCTCGCTAGCACCGGCCCGTTCTATTGCCCCGGCGACGAGACGGTCTACA
TGTCCGTCCCATTCTTCGACGAGCTGAAGCAAATGGGTGGATCCAACGGCCCATTCGCGCAGATGTATGTCACCGCCCAC
GAGTTCGGCCACCACATTCAGAACCTGGAGGGCACCCTGGGCTTGAGCGATTACGATAACCCGGGCGAGGATTCCAACGC
GGTGAAAATGGAGGTCCAAGCCGACTGCTACGCCGGAGTGTGGGCCCAAAACGCCGACAAGGGCGAGGACGCTCTGTTGG
AGCCCCTCACCCAGGAGCAGGTCGAGCAGGCCATCACTACTGCTCGTTCTATTGGCGATGACGCCATCCAGTCCAGTTCC
GGACAGGAAGTAGATCCCGACAAGTGGACCCACGGGTCTTCCGAAATGCGCGTGGACTGGTTCATGCGCGGCTACCAGGG
CGGCACCATGAAGTCCTGCCACCAGGACTTCCAGCGCTAA

Upstream 100 bases:

>100_bases
GAACAACTATTCCGATCGTGGGCAGCGCGGAGGCACGGGATCCGGCGGGGGCGGATTCGGCTTCGGCGGTGGGGGTGGCA
ATCAGGGTGGAGGCGGCGGC

Downstream 100 bases:

>100_bases
GCAGCACGCACGTAGCCCCGCGGCGCCCCCGCCTGCAGCGCTCTTAGCGCTGCGGCGGCAGGTATGGGCGCAGCCAGTTC
GGCACTGCACTGGCCGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MFTGLLFGALARRFGIPGIIVAAVLVFLFNGGLGMLSGNNSADQRAGVSNSRTGEGFEHCKTAEDANNNDDCRVLATAKS
VDQFWSSALPEEAGKKYSEPGLVLAEGQTSTRCGSANLASTGPFYCPGDETVYMSVPFFDELKQMGGSNGPFAQMYVTAH
EFGHHIQNLEGTLGLSDYDNPGEDSNAVKMEVQADCYAGVWAQNADKGEDALLEPLTQEQVEQAITTARSIGDDAIQSSS
GQEVDPDKWTHGSSEMRVDWFMRGYQGGTMKSCHQDFQR

Sequences:

>Translated_279_residues
MFTGLLFGALARRFGIPGIIVAAVLVFLFNGGLGMLSGNNSADQRAGVSNSRTGEGFEHCKTAEDANNNDDCRVLATAKS
VDQFWSSALPEEAGKKYSEPGLVLAEGQTSTRCGSANLASTGPFYCPGDETVYMSVPFFDELKQMGGSNGPFAQMYVTAH
EFGHHIQNLEGTLGLSDYDNPGEDSNAVKMEVQADCYAGVWAQNADKGEDALLEPLTQEQVEQAITTARSIGDDAIQSSS
GQEVDPDKWTHGSSEMRVDWFMRGYQGGTMKSCHQDFQR
>Mature_279_residues
MFTGLLFGALARRFGIPGIIVAAVLVFLFNGGLGMLSGNNSADQRAGVSNSRTGEGFEHCKTAEDANNNDDCRVLATAKS
VDQFWSSALPEEAGKKYSEPGLVLAEGQTSTRCGSANLASTGPFYCPGDETVYMSVPFFDELKQMGGSNGPFAQMYVTAH
EFGHHIQNLEGTLGLSDYDNPGEDSNAVKMEVQADCYAGVWAQNADKGEDALLEPLTQEQVEQAITTARSIGDDAIQSSS
GQEVDPDKWTHGSSEMRVDWFMRGYQGGTMKSCHQDFQR

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=263, Percent_Identity=36.5019011406844, Blast_Score=149, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 30082; Mature: 30082

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTGLLFGALARRFGIPGIIVAAVLVFLFNGGLGMLSGNNSADQRAGVSNSRTGEGFEHC
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCCCCHHHH
KTAEDANNNDDCRVLATAKSVDQFWSSALPEEAGKKYSEPGLVLAEGQTSTRCGSANLAS
HCCCCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCC
TGPFYCPGDETVYMSVPFFDELKQMGGSNGPFAQMYVTAHEFGHHIQNLEGTLGLSDYDN
CCCEECCCCCEEEEECCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCC
PGEDSNAVKMEVQADCYAGVWAQNADKGEDALLEPLTQEQVEQAITTARSIGDDAIQSSS
CCCCCCEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCC
GQEVDPDKWTHGSSEMRVDWFMRGYQGGTMKSCHQDFQR
CCCCCCCCCCCCCCCEEHHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MFTGLLFGALARRFGIPGIIVAAVLVFLFNGGLGMLSGNNSADQRAGVSNSRTGEGFEHC
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCCCCHHHH
KTAEDANNNDDCRVLATAKSVDQFWSSALPEEAGKKYSEPGLVLAEGQTSTRCGSANLAS
HCCCCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCC
TGPFYCPGDETVYMSVPFFDELKQMGGSNGPFAQMYVTAHEFGHHIQNLEGTLGLSDYDN
CCCEECCCCCEEEEECCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCC
PGEDSNAVKMEVQADCYAGVWAQNADKGEDALLEPLTQEQVEQAITTARSIGDDAIQSSS
CCCCCCEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCC
GQEVDPDKWTHGSSEMRVDWFMRGYQGGTMKSCHQDFQR
CCCCCCCCCCCCCCCEEHHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]