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The map label for this gene is rsmE [H]

Identifier: 68535674

GI number: 68535674

Start: 729254

End: 730033

Strand: Direct

Name: rsmE [H]

Synonym: jk0602

Alternate gene names: 68535674

Gene position: 729254-730033 (Clockwise)

Preceding gene: 68535673

Following gene: 68535675

Centisome position: 29.61

GC content: 68.08

Gene sequence:

>780_bases
ATGACAGATCCGGTGTTCGTCCACCCCATTCCCGAGCCGGTTGTTGTCGGCGATCGCTTCCGTTTGACCGGCGCGGAGGC
CAAGCACGCCTCCGTCAAGCGTCTTGAAGTGGGCGAGGGGTTGGTCGTCACCGATGGCGCTGCGCGCGCGGTGCAAGGTT
CTTTTCTTGGTGACGCCACCGTGGAGGTCATCGACATTCTCGAACTGCCCACCCCGCACCCGCGGGTGACGGTGGTACAG
GCGATTCCAAAGTCCGATAGGGCAGAGCTAGCTGTGGATCTGGCGGTGCAGGCGGGCGCGGATCGGATTGTTCCGTGGGC
CGCCCGCAGGGCTATCGCAAAGTGGGATGGCAAGGAGGCTAAGGCCCACGCGAAATGGGATAACGCAGCCCGCGCGGCGG
CCAAGCAGTCCCGTCGCCTGCAGATCCCAGAGGTTACCCAACTGGTGCGCACCCCGCAGGAGCTGGCACGGGTGCTGGGC
ATGGGGGAGGCCAGCGCCGGTAACGACGCAAGCGCCGTGCGAGTGCTGGTTTTGCACGAGGAGGCCACCGAGCCGCTGCC
CGCGGCCGTCACGGCGGCGGTAGGCAGTGCCAGTGACGCGGGCGCCACTGAAATCGCCCTCGTCGTCGGCCCCGAGGGCG
GCATCAGCCCGGAGGAACTCGCCGAATTCGAGCAGCTGGGAGCCACCCCGGTCCGCCTGGGGCCGGAAGTTCTGCGCACC
GCCACCGCTGCAGCCGTGGCGCTGGGAGCCATCGGCGCTGTCACGGACCGTTGGCGGTAG

Upstream 100 bases:

>100_bases
GCTGCGAGAAGCCAGCTCCCAGAACGCTGGCGTGGCTTCCAAGGACGAGTCCCATAGCGGCTTCTTCTCCCGCCTGCGCT
CGAAGTTTGGCCGTTAGCCC

Downstream 100 bases:

>100_bases
GATCGATACACATGACGTCACCCAACTCCGCTAGGTCACCGCGCCCCCGCGTAGCCAGCTCCACCGTGGAGCTTGACCCG
GATTCGATCCTGGCCGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTDPVFVHPIPEPVVVGDRFRLTGAEAKHASVKRLEVGEGLVVTDGAARAVQGSFLGDATVEVIDILELPTPHPRVTVVQ
AIPKSDRAELAVDLAVQAGADRIVPWAARRAIAKWDGKEAKAHAKWDNAARAAAKQSRRLQIPEVTQLVRTPQELARVLG
MGEASAGNDASAVRVLVLHEEATEPLPAAVTAAVGSASDAGATEIALVVGPEGGISPEELAEFEQLGATPVRLGPEVLRT
ATAAAVALGAIGAVTDRWR

Sequences:

>Translated_259_residues
MTDPVFVHPIPEPVVVGDRFRLTGAEAKHASVKRLEVGEGLVVTDGAARAVQGSFLGDATVEVIDILELPTPHPRVTVVQ
AIPKSDRAELAVDLAVQAGADRIVPWAARRAIAKWDGKEAKAHAKWDNAARAAAKQSRRLQIPEVTQLVRTPQELARVLG
MGEASAGNDASAVRVLVLHEEATEPLPAAVTAAVGSASDAGATEIALVVGPEGGISPEELAEFEQLGATPVRLGPEVLRT
ATAAAVALGAIGAVTDRWR
>Mature_258_residues
TDPVFVHPIPEPVVVGDRFRLTGAEAKHASVKRLEVGEGLVVTDGAARAVQGSFLGDATVEVIDILELPTPHPRVTVVQA
IPKSDRAELAVDLAVQAGADRIVPWAARRAIAKWDGKEAKAHAKWDNAARAAAKQSRRLQIPEVTQLVRTPQELARVLGM
GEASAGNDASAVRVLVLHEEATEPLPAAVTAAVGSASDAGATEIALVVGPEGGISPEELAEFEQLGATPVRLGPEVLRTA
TAAAVALGAIGAVTDRWR

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

Organism=Escherichia coli, GI87082186, Length=266, Percent_Identity=27.0676691729323, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015947
- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 26995; Mature: 26864

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPVFVHPIPEPVVVGDRFRLTGAEAKHASVKRLEVGEGLVVTDGAARAVQGSFLGDAT
CCCCEEECCCCCCEEECCEEEECCCCCCCCHHEEEECCCCEEEECCCHHHHCCCCCCCHH
VEVIDILELPTPHPRVTVVQAIPKSDRAELAVDLAVQAGADRIVPWAARRAIAKWDGKEA
HHHHHHHCCCCCCCCEEEEEECCCCCCHHEEEEEEECCCCCCCCHHHHHHHHHHCCCCCC
KAHAKWDNAARAAAKQSRRLQIPEVTQLVRTPQELARVLGMGEASAGNDASAVRVLVLHE
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEC
EATEPLPAAVTAAVGSASDAGATEIALVVGPEGGISPEELAEFEQLGATPVRLGPEVLRT
CCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHH
ATAAAVALGAIGAVTDRWR
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDPVFVHPIPEPVVVGDRFRLTGAEAKHASVKRLEVGEGLVVTDGAARAVQGSFLGDAT
CCCEEECCCCCCEEECCEEEECCCCCCCCHHEEEECCCCEEEECCCHHHHCCCCCCCHH
VEVIDILELPTPHPRVTVVQAIPKSDRAELAVDLAVQAGADRIVPWAARRAIAKWDGKEA
HHHHHHHCCCCCCCCEEEEEECCCCCCHHEEEEEEECCCCCCCCHHHHHHHHHHCCCCCC
KAHAKWDNAARAAAKQSRRLQIPEVTQLVRTPQELARVLGMGEASAGNDASAVRVLVLHE
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEC
EATEPLPAAVTAAVGSASDAGATEIALVVGPEGGISPEELAEFEQLGATPVRLGPEVLRT
CCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHH
ATAAAVALGAIGAVTDRWR
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]