Click here to switch to the map view.

The map label for this gene is ybeB [H]

Identifier: 68535640

GI number: 68535640

Start: 688182

End: 688655

Strand: Direct

Name: ybeB [H]

Synonym: jk0568

Alternate gene names: 68535640

Gene position: 688182-688655 (Clockwise)

Preceding gene: 68535639

Following gene: 68535641

Centisome position: 27.95

GC content: 64.56

Gene sequence:

>474_bases
TTGACTGCTACTGCAGATTCGATCGCGCTCGCCGGAGTGGCGGCACGCGCAGCGGCCGAGAAGCTGGGGGAGGACATCCT
GGTCCTCGATGTCTCGGACCGTTTGGCCATTACGGACGTGTTCGTCATCGTCAGCGGAGATAACGAGCGCATGGTGAACT
CCATCGTCGACGAGGTGGAGTACGAGGTGGGCCAGGACGGGCCCAAGCCAACCCGCCGCGAGGGCCGCGGTGAGGGCCAC
TGGGTGCTGCTGGATTACGGCAATGTCGTGGTGCACGTGCAGCGTAAGGAAGAGCGCGAGTTCTACGCGCTAGACCGCCT
GTGGCGCGATGCCCCGCAGATCGAGGTCGAGGGCGTGGAACAGGTAGACCGCGGAAGCAATTGGGATGCCGATGCAGAGG
TAGATGTTCTGGAAGCCACCAGCATCGACGACCTGCCGCTAGCCGGCCCCGCCCCGGACGCCGACGAGCTGTAA

Upstream 100 bases:

>100_bases
TGCAGTACATCGCCAAGCACGGCATGTACGTTTCCAGCGAATAGCTGGTGGGTTGCTAAACTAGTTGTGTTTTAAACCAA
TCATGAAGGGCTGAAATTTT

Downstream 100 bases:

>100_bases
AAGCTGATAAGTCTTCACCATGGGCGAGCGCAGGGTCTTTTTGGTCCGTCACGGACAGACGGAGTACAACGCCACGGGGC
GTATGCAGGGACAGCTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MTATADSIALAGVAARAAAEKLGEDILVLDVSDRLAITDVFVIVSGDNERMVNSIVDEVEYEVGQDGPKPTRREGRGEGH
WVLLDYGNVVVHVQRKEEREFYALDRLWRDAPQIEVEGVEQVDRGSNWDADAEVDVLEATSIDDLPLAGPAPDADEL

Sequences:

>Translated_157_residues
MTATADSIALAGVAARAAAEKLGEDILVLDVSDRLAITDVFVIVSGDNERMVNSIVDEVEYEVGQDGPKPTRREGRGEGH
WVLLDYGNVVVHVQRKEEREFYALDRLWRDAPQIEVEGVEQVDRGSNWDADAEVDVLEATSIDDLPLAGPAPDADEL
>Mature_156_residues
TATADSIALAGVAARAAAEKLGEDILVLDVSDRLAITDVFVIVSGDNERMVNSIVDEVEYEVGQDGPKPTRREGRGEGHW
VLLDYGNVVVHVQRKEEREFYALDRLWRDAPQIEVEGVEQVDRGSNWDADAEVDVLEATSIDDLPLAGPAPDADEL

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=86, Percent_Identity=40.6976744186046, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 17171; Mature: 17040

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: PS00014 ER_TARGET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATADSIALAGVAARAAAEKLGEDILVLDVSDRLAITDVFVIVSGDNERMVNSIVDEVE
CCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEEECCCHHHHHHHHHHHH
YEVGQDGPKPTRREGRGEGHWVLLDYGNVVVHVQRKEEREFYALDRLWRDAPQIEVEGVE
HHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCEEECCCH
QVDRGSNWDADAEVDVLEATSIDDLPLAGPAPDADEL
HHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TATADSIALAGVAARAAAEKLGEDILVLDVSDRLAITDVFVIVSGDNERMVNSIVDEVE
CCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEEECCCHHHHHHHHHHHH
YEVGQDGPKPTRREGRGEGHWVLLDYGNVVVHVQRKEEREFYALDRLWRDAPQIEVEGVE
HHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCEEECCCH
QVDRGSNWDADAEVDVLEATSIDDLPLAGPAPDADEL
HHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]