Click here to switch to the map view.

The map label for this gene is 68535625

Identifier: 68535625

GI number: 68535625

Start: 671355

End: 672713

Strand: Direct

Name: 68535625

Synonym: jk0553

Alternate gene names: NA

Gene position: 671355-672713 (Clockwise)

Preceding gene: 68535624

Following gene: 68535626

Centisome position: 27.26

GC content: 64.68

Gene sequence:

>1359_bases
ATGTGGTTTATTATTCGGTGCATGACGTTAACGCGCCGTGCATTTTTCCGCTCTTCCACCGCCTTGGGGGCCGCCGTTGG
TGGCTCCCTTCTCTTCGCCAACCGCAACAACATGGGGGTCTTCTCCTCCGCCGACGATGCTCTTCCCGGTGCAGATCCCG
CCGGAGCTGCCAGCGCACCGACCCCTGCGGAGCCAGAGGGTTTTACCGGGACGGGAATCGGCGTCAACCAAAAGGGCGAG
CTGCCCGGAGGTACCGGGTACCTCACGATCACCTTTGCTCCCGCAGCGACCGAGGCCACGCAGGCGACCCTGCGCTTCGA
ATTCCCGGACGGGCGCACCGAAGACCGCGTAGTTCTGCCCGAGGCGCACGACCGCGAAGGCGATGATTCCGCACTGAAAT
CCGAGCCTGTAGAGCTGCCGGATGGTGCCACGGCTGTCTGGCTTCCCGGTGAGGTTAACGACCCGGCTACCCGCCTGTTC
CTTCACATCGTGGAGGCCCCACAGGGGCAGGAAGAGCAGATTTTCGGGGCGGGCATTGCACCCTACGCGGCGCCCATGGG
TCTACCCTCCAACCCGGCTGAACTGCAAAGCAGCCTGGAGACCGGAGCGGCGGGCCTAGCTGGCTCGCTAGCGCTGGCGG
GCACTATTGCTGGGATCCTACAGTCCAGCGGTCTGGCCAATCCGGGTGTGCCGGCTCCGGGTGGCGGTAATGGCATCGGT
GGGGCGAACGTGATCAACGGCCTGCGCGTGGTTTCCCGTCGCGAATGGGGAGCGAACGAGTCGCTCACGGGGTGGACTCC
TCGCTTCACCCGCGCACAGCTCATCACCGTGCACCACACGGCAATGGCTACCCCGGTTAACGGTGACTATGCCGCGAATG
TCCGCAGCATTTACGCCTTCCACGCTTCTTCAGCGAATGGTGGCCGCGGGTGGGGCGACATCGGCTACCACCTGCTGATC
GCCCCGGACGGCACAGTGTTCCAGGGGCGGACCACCGGCACAGATGGCCAGGCGGTTTTCCAGTCCGGAAGCTTAGGCGC
ATCACCTATGTCCGTTACTGCAGGGCACGTGTACAACGCGAACGACGGCAACATTGGTGTGTGTCTGCTGGGCAACTTCA
TGCAGCAGGCGCCAACCCCCGCCGCTATCAACTCCCTCGTGCGCGTTCTTGGCCACCTGTGCCGTGGGCTGGGGCTGGAC
CCACGCGGCAGTGTGCGTTACGTGAACAACGCGGCCCGCCTGAATCTGACTCGCCGCACGATTACCGGCCACCGCGACTG
GAGCGACGTTTCTACTGCCACTGCGTGCCCGGGTGACCGCGCGTATGCGCTGATGGATCAGGTGCGCAGCCGCGTGTAG

Upstream 100 bases:

>100_bases
CTGACTAGACCCCGGGACGCCACATTTGCACCACCTTTAACATCGGTCACATTTACCTGGGGATACCCTTAAAGAGGGGT
AAGCCTCCCTCTACCCCCGA

Downstream 100 bases:

>100_bases
CGCCAAGGCGTTGCGGCGCTGTAGTGCCGTGACGCCACGTGTAGAATTACTGGCATGACTGAACGCACTCTGATTCTGAT
CAAGCCCGACGGTGTTAAGA

Product: putative secreted protein

Products: NA

Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase; LGFP Repeat-Containing Protein; N-Acetylmuramoyl-L-Alanine Amidase Domain Protein; Twin-Arginine Translocation Pathway Signal; N-Acetymuramoyl-L-Alanine Amidase; N-Acetylmuramyl-L-Alanine Amidase; FG-GAP Repeat-Containing Protein; LysM Domain-Containing Protein; N-Acetylmuramoyl-L-Alanine Amidase Lytc; LGFP Repeat Protein

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MWFIIRCMTLTRRAFFRSSTALGAAVGGSLLFANRNNMGVFSSADDALPGADPAGAASAPTPAEPEGFTGTGIGVNQKGE
LPGGTGYLTITFAPAATEATQATLRFEFPDGRTEDRVVLPEAHDREGDDSALKSEPVELPDGATAVWLPGEVNDPATRLF
LHIVEAPQGQEEQIFGAGIAPYAAPMGLPSNPAELQSSLETGAAGLAGSLALAGTIAGILQSSGLANPGVPAPGGGNGIG
GANVINGLRVVSRREWGANESLTGWTPRFTRAQLITVHHTAMATPVNGDYAANVRSIYAFHASSANGGRGWGDIGYHLLI
APDGTVFQGRTTGTDGQAVFQSGSLGASPMSVTAGHVYNANDGNIGVCLLGNFMQQAPTPAAINSLVRVLGHLCRGLGLD
PRGSVRYVNNAARLNLTRRTITGHRDWSDVSTATACPGDRAYALMDQVRSRV

Sequences:

>Translated_452_residues
MWFIIRCMTLTRRAFFRSSTALGAAVGGSLLFANRNNMGVFSSADDALPGADPAGAASAPTPAEPEGFTGTGIGVNQKGE
LPGGTGYLTITFAPAATEATQATLRFEFPDGRTEDRVVLPEAHDREGDDSALKSEPVELPDGATAVWLPGEVNDPATRLF
LHIVEAPQGQEEQIFGAGIAPYAAPMGLPSNPAELQSSLETGAAGLAGSLALAGTIAGILQSSGLANPGVPAPGGGNGIG
GANVINGLRVVSRREWGANESLTGWTPRFTRAQLITVHHTAMATPVNGDYAANVRSIYAFHASSANGGRGWGDIGYHLLI
APDGTVFQGRTTGTDGQAVFQSGSLGASPMSVTAGHVYNANDGNIGVCLLGNFMQQAPTPAAINSLVRVLGHLCRGLGLD
PRGSVRYVNNAARLNLTRRTITGHRDWSDVSTATACPGDRAYALMDQVRSRV
>Mature_452_residues
MWFIIRCMTLTRRAFFRSSTALGAAVGGSLLFANRNNMGVFSSADDALPGADPAGAASAPTPAEPEGFTGTGIGVNQKGE
LPGGTGYLTITFAPAATEATQATLRFEFPDGRTEDRVVLPEAHDREGDDSALKSEPVELPDGATAVWLPGEVNDPATRLF
LHIVEAPQGQEEQIFGAGIAPYAAPMGLPSNPAELQSSLETGAAGLAGSLALAGTIAGILQSSGLANPGVPAPGGGNGIG
GANVINGLRVVSRREWGANESLTGWTPRFTRAQLITVHHTAMATPVNGDYAANVRSIYAFHASSANGGRGWGDIGYHLLI
APDGTVFQGRTTGTDGQAVFQSGSLGASPMSVTAGHVYNANDGNIGVCLLGNFMQQAPTPAAINSLVRVLGHLCRGLGLD
PRGSVRYVNNAARLNLTRRTITGHRDWSDVSTATACPGDRAYALMDQVRSRV

Specific function: Unknown

COG id: COG5479

COG function: function code M; Uncharacterized protein potentially involved in peptidoglycan biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46772; Mature: 46772

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFIIRCMTLTRRAFFRSSTALGAAVGGSLLFANRNNMGVFSSADDALPGADPAGAASAP
CEEEEEEHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCCC
TPAEPEGFTGTGIGVNQKGELPGGTGYLTITFAPAATEATQATLRFEFPDGRTEDRVVLP
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEECC
EAHDREGDDSALKSEPVELPDGATAVWLPGEVNDPATRLFLHIVEAPQGQEEQIFGAGIA
CCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCHHHEEEEHEECCCCCCCCEEEECCCC
PYAAPMGLPSNPAELQSSLETGAAGLAGSLALAGTIAGILQSSGLANPGVPAPGGGNGIG
HHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GANVINGLRVVSRREWGANESLTGWTPRFTRAQLITVHHTAMATPVNGDYAANVRSIYAF
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHEEECCCCCCHHCCEEEEEEE
HASSANGGRGWGDIGYHLLIAPDGTVFQGRTTGTDGQAVFQSGSLGASPMSVTAGHVYNA
ECCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHEEECCCCCCCCCEEECCEEEEC
NDGNIGVCLLGNFMQQAPTPAAINSLVRVLGHLCRGLGLDPRGSVRYVNNAARLNLTRRT
CCCCEEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEHE
ITGHRDWSDVSTATACPGDRAYALMDQVRSRV
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MWFIIRCMTLTRRAFFRSSTALGAAVGGSLLFANRNNMGVFSSADDALPGADPAGAASAP
CEEEEEEHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCCC
TPAEPEGFTGTGIGVNQKGELPGGTGYLTITFAPAATEATQATLRFEFPDGRTEDRVVLP
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEECC
EAHDREGDDSALKSEPVELPDGATAVWLPGEVNDPATRLFLHIVEAPQGQEEQIFGAGIA
CCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCHHHEEEEHEECCCCCCCCEEEECCCC
PYAAPMGLPSNPAELQSSLETGAAGLAGSLALAGTIAGILQSSGLANPGVPAPGGGNGIG
HHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GANVINGLRVVSRREWGANESLTGWTPRFTRAQLITVHHTAMATPVNGDYAANVRSIYAF
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHEEECCCCCCHHCCEEEEEEE
HASSANGGRGWGDIGYHLLIAPDGTVFQGRTTGTDGQAVFQSGSLGASPMSVTAGHVYNA
ECCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHEEECCCCCCCCCEEECCEEEEC
NDGNIGVCLLGNFMQQAPTPAAINSLVRVLGHLCRGLGLDPRGSVRYVNNAARLNLTRRT
CCCCEEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEHE
ITGHRDWSDVSTATACPGDRAYALMDQVRSRV
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA