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The map label for this gene is tnp3508b

Identifier: 68535579

GI number: 68535579

Start: 617024

End: 618373

Strand: Direct

Name: tnp3508b

Synonym: jk0509

Alternate gene names: NA

Gene position: 617024-618373 (Clockwise)

Preceding gene: 68535575

Following gene: 68535580

Centisome position: 25.06

GC content: 58.37

Gene sequence:

>1350_bases
ATGACTGCTGTGTCACCGAAGAAAGGCCATGACCCGGCAAGGGTCAACGAGATCAGCGAGAAGCTGATGGAAAATCCTGA
GCTCGCTAGCTTGATCAGCGAGCTGTCGACGTCCGCTGATGATGCAAGCGACTTGGTCAAAGGCCTGCTGCAGGCATCGA
TCAACGCTGGTCTGCAGGCGGAAATGGATGCGCATTTGGGCTACGGACATTCCGACCGTAAGGCCAAAGCCCAGGTGGAA
GCCGCGCAGGAGAGCAATCACCGCAACGGGTCGTACACCAAGACCGTCAATTCTGGCTACGGTGCAGTGGAAGTGACCGT
GCCCAGGGATCGTGCCGGCACGTTTACACCGAAGATGGTGCCCAAGGGCGCACGTCGGCTGACAGAGCTCGACGATATGA
TCGTCTCGCTGTACGCCGGCGGGATGACAGTGCGCGATATTCAACACCATCTCGCAACCACGCTTGGGGTGGATATGAGC
CCGGATACGATCAGCACGATTACCGATGCGGTGTTAGACGAGGTCATGATCTGGCAAAACCGCCAGCTCGACGAGTTTTA
CCCGGTGATCTTCCTCGACGCACTCCGCGTCAAAATCCGTGACGGTCACCGCGTGGTCAACAAAGCCTGCTACATGGCTG
TTGGCATCGACATCGACGGCATCAAGCACATCTTGGGATTGTGGATCGCTGAAAATGAAGGCGCTGCATTCTGGGCATCG
GTGTGCGCGGATCTGGCCAACCGGGGTGTCCAAGACGTGTTCATCGTCTGCTGCGACGGGCTGAAAGGTCTACCGGAAGC
CGTGGAGGCAACCTGGCCGAATTCTATGGTGCAGACCTGCATCGTGCACCTAATTCGAGCTGCGAACCGGTGGGTGTCCT
ACCAGGACCGCAAATCTGTCTCCCGTGCGCTACGTGAGGTCTACACGGCCGCCAACGAGGACACCGCCCGGGCCAGCCTT
GATGCTTTCGAGGCCAGTGAACTGGGCCGTAAATACCCGCAGTCGGTCAAAGTCTGGCGCGACGCGTGGGAGCGGTTCAT
ACCGTTTCTGCAGTTCCCGCCGGCCGCACGCCGGGTGCTCTACACCACCAATTCAATCGAGTCGCTCAACGCTGAACTGC
GGAAAGCTACCCGTAACCGGGGGCAATTCCCGAACGATACTGCGGCGCTGAAAACGCTGTGGCTGATGATCTGCAACATC
GAAGACAAGCGCGCCGCCCAGCGAGCGAAGAAAGCGAAACGCGACATCGAATGCAACGGCTATATTGAAGGAGCGAAAGC
CACCGGGTGGAAACAAGCCATCAACCAACTAGCTGTGGCGTACCCCGACCGATTCGCGGACTACTTGTAA

Upstream 100 bases:

>100_bases
CGTTCAGCACGCAGCTCGGCGCTGGTATGGGTGCGCGGAGTTAAGAGGGTGTCAGGAAGTTTGTGTGTGAGGCTCTGATC
TAGAAGGAGTTTCACTGATA

Downstream 100 bases:

>100_bases
CCCAAGCCCCCCGCACACAAAGAATCGGACACTCTCCGGAGTTAATGGCGTGGCCATGATCTCTCCAATCGTTGTGTGCG
AACGGTGTATCTGAAGTATA

Product: transposase for IS3508b

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MTAVSPKKGHDPARVNEISEKLMENPELASLISELSTSADDASDLVKGLLQASINAGLQAEMDAHLGYGHSDRKAKAQVE
AAQESNHRNGSYTKTVNSGYGAVEVTVPRDRAGTFTPKMVPKGARRLTELDDMIVSLYAGGMTVRDIQHHLATTLGVDMS
PDTISTITDAVLDEVMIWQNRQLDEFYPVIFLDALRVKIRDGHRVVNKACYMAVGIDIDGIKHILGLWIAENEGAAFWAS
VCADLANRGVQDVFIVCCDGLKGLPEAVEATWPNSMVQTCIVHLIRAANRWVSYQDRKSVSRALREVYTAANEDTARASL
DAFEASELGRKYPQSVKVWRDAWERFIPFLQFPPAARRVLYTTNSIESLNAELRKATRNRGQFPNDTAALKTLWLMICNI
EDKRAAQRAKKAKRDIECNGYIEGAKATGWKQAINQLAVAYPDRFADYL

Sequences:

>Translated_449_residues
MTAVSPKKGHDPARVNEISEKLMENPELASLISELSTSADDASDLVKGLLQASINAGLQAEMDAHLGYGHSDRKAKAQVE
AAQESNHRNGSYTKTVNSGYGAVEVTVPRDRAGTFTPKMVPKGARRLTELDDMIVSLYAGGMTVRDIQHHLATTLGVDMS
PDTISTITDAVLDEVMIWQNRQLDEFYPVIFLDALRVKIRDGHRVVNKACYMAVGIDIDGIKHILGLWIAENEGAAFWAS
VCADLANRGVQDVFIVCCDGLKGLPEAVEATWPNSMVQTCIVHLIRAANRWVSYQDRKSVSRALREVYTAANEDTARASL
DAFEASELGRKYPQSVKVWRDAWERFIPFLQFPPAARRVLYTTNSIESLNAELRKATRNRGQFPNDTAALKTLWLMICNI
EDKRAAQRAKKAKRDIECNGYIEGAKATGWKQAINQLAVAYPDRFADYL
>Mature_448_residues
TAVSPKKGHDPARVNEISEKLMENPELASLISELSTSADDASDLVKGLLQASINAGLQAEMDAHLGYGHSDRKAKAQVEA
AQESNHRNGSYTKTVNSGYGAVEVTVPRDRAGTFTPKMVPKGARRLTELDDMIVSLYAGGMTVRDIQHHLATTLGVDMSP
DTISTITDAVLDEVMIWQNRQLDEFYPVIFLDALRVKIRDGHRVVNKACYMAVGIDIDGIKHILGLWIAENEGAAFWASV
CADLANRGVQDVFIVCCDGLKGLPEAVEATWPNSMVQTCIVHLIRAANRWVSYQDRKSVSRALREVYTAANEDTARASLD
AFEASELGRKYPQSVKVWRDAWERFIPFLQFPPAARRVLYTTNSIESLNAELRKATRNRGQFPNDTAALKTLWLMICNIE
DKRAAQRAKKAKRDIECNGYIEGAKATGWKQAINQLAVAYPDRFADYL

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 49804; Mature: 49673

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVSPKKGHDPARVNEISEKLMENPELASLISELSTSADDASDLVKGLLQASINAGLQA
CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
EMDAHLGYGHSDRKAKAQVEAAQESNHRNGSYTKTVNSGYGAVEVTVPRDRAGTFTPKMV
HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCC
PKGARRLTELDDMIVSLYAGGMTVRDIQHHLATTLGVDMSPDTISTITDAVLDEVMIWQN
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
RQLDEFYPVIFLDALRVKIRDGHRVVNKACYMAVGIDIDGIKHILGLWIAENEGAAFWAS
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHHHH
VCADLANRGVQDVFIVCCDGLKGLPEAVEATWPNSMVQTCIVHLIRAANRWVSYQDRKSV
HHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
SRALREVYTAANEDTARASLDAFEASELGRKYPQSVKVWRDAWERFIPFLQFPPAARRVL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHCEEE
YTTNSIESLNAELRKATRNRGQFPNDTAALKTLWLMICNIEDKRAAQRAKKAKRDIECNG
EECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
YIEGAKATGWKQAINQLAVAYPDRFADYL
EECCCCCCCHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure 
TAVSPKKGHDPARVNEISEKLMENPELASLISELSTSADDASDLVKGLLQASINAGLQA
CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
EMDAHLGYGHSDRKAKAQVEAAQESNHRNGSYTKTVNSGYGAVEVTVPRDRAGTFTPKMV
HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCC
PKGARRLTELDDMIVSLYAGGMTVRDIQHHLATTLGVDMSPDTISTITDAVLDEVMIWQN
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
RQLDEFYPVIFLDALRVKIRDGHRVVNKACYMAVGIDIDGIKHILGLWIAENEGAAFWAS
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHHHH
VCADLANRGVQDVFIVCCDGLKGLPEAVEATWPNSMVQTCIVHLIRAANRWVSYQDRKSV
HHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
SRALREVYTAANEDTARASLDAFEASELGRKYPQSVKVWRDAWERFIPFLQFPPAARRVL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHCEEE
YTTNSIESLNAELRKATRNRGQFPNDTAALKTLWLMICNIEDKRAAQRAKKAKRDIECNG
EECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
YIEGAKATGWKQAINQLAVAYPDRFADYL
EECCCCCCCHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA