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The map label for this gene is clpS

Identifier: 68535563

GI number: 68535563

Start: 604389

End: 604694

Strand: Direct

Name: clpS

Synonym: jk0493

Alternate gene names: 68535563

Gene position: 604389-604694 (Clockwise)

Preceding gene: 68535560

Following gene: 68535564

Centisome position: 24.54

GC content: 61.44

Gene sequence:

>306_bases
ATGACTTCCCCAGCCGCTCCCGCTGCCACCCCTGTAGCGGACAAACTGCCAGAAACACTGACGGAGCCCAACCTGCCGTG
GATGTGCATCTGTTGGGATGATCCGGTGAACTTGATGAGCTACGTGACGTACGTCTTCCAGACCGTACTGGGCTATTCGC
GCAAGCGCGCCACGGAGCTGATGATGCAGGTCCACACTGAGGGTAAGGCCGTGGTGAGCTCGGGTGAGCGCGACAAGGTT
GAAGGGGATGTGAAGAAGCTGCAGACCGCCGGGCTATGGGCGACGATGCAGCGGGCGGACGGGTAG

Upstream 100 bases:

>100_bases
CGGAGGAGCGGGTGTTGTTTTCGTTCACCCGCTCCATGCTAGTCCACGCCCCACCACGGACCCGGCAGCGAAGATGGCCG
ATGTGGGTATTCTGGAAAGC

Downstream 100 bases:

>100_bases
GCGTCAATAAAGAAAGAAGGAACGAACATGCAGCCGTGGACGAAGAAGAACAGCCTGCTGCGCGGGACTCGCTTTAATAC
GCAGCTAGAGCCGCTCGAGC

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTSPAAPAATPVADKLPETLTEPNLPWMCICWDDPVNLMSYVTYVFQTVLGYSRKRATELMMQVHTEGKAVVSSGERDKV
EGDVKKLQTAGLWATMQRADG

Sequences:

>Translated_101_residues
MTSPAAPAATPVADKLPETLTEPNLPWMCICWDDPVNLMSYVTYVFQTVLGYSRKRATELMMQVHTEGKAVVSSGERDKV
EGDVKKLQTAGLWATMQRADG
>Mature_100_residues
TSPAAPAATPVADKLPETLTEPNLPWMCICWDDPVNLMSYVTYVFQTVLGYSRKRATELMMQVHTEGKAVVSSGERDKVE
GDVKKLQTAGLWATMQRADG

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CLPS_CORJK (Q4JX07)

Other databases:

- EMBL:   CR931997
- RefSeq:   YP_250268.1
- ProteinModelPortal:   Q4JX07
- SMR:   Q4JX07
- STRING:   Q4JX07
- GeneID:   3431947
- GenomeReviews:   CR931997_GR
- KEGG:   cjk:jk0493
- NMPDR:   fig|306537.3.peg.128
- eggNOG:   COG2127
- HOGENOM:   HBG545468
- OMA:   GLWATLQ
- ProtClustDB:   PRK00033
- BioCyc:   CJEI306537:JK0493-MONOMER
- HAMAP:   MF_00302
- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719
- Gene3D:   G3DSA:3.30.1390.10

Pfam domain/function: PF02617 ClpS; SSF54736 Ribosomal_L7/12_C/ClpS-like

EC number: NA

Molecular weight: Translated: 11133; Mature: 11002

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPAAPAATPVADKLPETLTEPNLPWMCICWDDPVNLMSYVTYVFQTVLGYSRKRATEL
CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHH
MMQVHTEGKAVVSSGERDKVEGDVKKLQTAGLWATMQRADG
HHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSPAAPAATPVADKLPETLTEPNLPWMCICWDDPVNLMSYVTYVFQTVLGYSRKRATEL
CCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHH
MMQVHTEGKAVVSSGERDKVEGDVKKLQTAGLWATMQRADG
HHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA