| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is serB [H]
Identifier: 68535553
GI number: 68535553
Start: 589213
End: 590595
Strand: Direct
Name: serB [H]
Synonym: jk0483
Alternate gene names: 68535553
Gene position: 589213-590595 (Clockwise)
Preceding gene: 68535551
Following gene: 68535555
Centisome position: 23.93
GC content: 62.76
Gene sequence:
>1383_bases GTGACTACCTCTGATAACGCCAACAACTCCAACGCTTCCGCCGACCAGCCCGCTGCTGCCCAGCCCACCGCTGCCCAACC TGCTGCTGCCCAGCACGCAGCCGGCCCAGCCAATGACCCGCACTTCGAGACTGCGCTCGAGGACACGCTGCAGGAAGGCC TCGCCCCCAGCGTCATTACCGTTACCGGACCCGACCGTCCCGGTGTATCTGCGGCCTTTTTCCGCGTATTGTCCTCTTAC GGAGTGCAACTTCTCGACATCGAGCAGTCTGTCTTCCGGGGGAAGTTGTCGCTGGCCGCTCTAGTGGGCGTCGGACAGGA AGACCTTGAACCGCTAGGCGAGGGGCTCAAAGAAACCCTGGCTTCCTACGGCATGCGCGTCAGCGTCGAGGCAGACGATA ACCTTTCCAGCACCCGTCCGCACTCCACGCACGTGATGGTTGTGCTCGGCCGTCCGCTGACCGCGACGCACATTTCCCGT ATCGGCCAGACCCTGGCCGACTACGGTGCGAATATCGACACGATCACCGGCATCGCGGATTACCCGGTCACCGGCCTGGA GCTAAACCTGACTGTCGCCAACCCAGCACCCGGCGGCGGCGTGCCGCTGCGCAAAGCACTTGCGACCCTTACCTCAGAGG TTGGCGTGGACATCGCCATCGAGCGTGCGGGCCTGGCCCGTCGGGCAAAGCGTCTCATTTGCTTTGACGTAGACTCCACC CTCATCCAGCACGAGGTTATCGAAATGCTGGCGGCCTACGCCGGCCGTGAGGAAGAGGTTGCCGCCGTCACCGAGCGCGC CATGCGCGGCGAGCTGGACTTCGCCGAATCCCTGCACGAGCGTGTGAAGGCTCTCGCCGGTTTGGATGCCGCTGTAGTGG AAAAGGTAGCCCATGACATCCAGCTGACCCCCGGCGCTCGCACCACCATCCGCACCCTGAAGCGCCTGGGCTACAAGGCG GGTGTTGTTTCCGGTGGATTCATTCAGGTCATCGAGCCACTGGCCCGCGACCTGGACCTCGACTTCGCCCGTGCGAATAC TCTGGAGATTGTGGACGGCAAGCTCACCGGCCGCGTGATTGGCCCGGTCATCGACCGTCAGGCTAAGGCTGAAAGCCTCA AGGAGTTCGCTTGGTCCAACGGCATCCAGCTGAACCAGACTGTCGCGGTCGGTGACGGCGCAAACGACATTGACATGCTT TCCACGGCTGGCCTAGGCATCGCTTTCAACGCGAAACCCGCTCTCAAGGAGATCGCGGACGCCTCTGTGAACTACCCCTT CCTGGACCAGGTGCTGTTCATTCTTGGCATTTCTCGCCACGAGATTGAGGACGCCGACCTCCGCGACGGCACCTACCGTC GAGTGCCGATCGCCGAAGACTAA
Upstream 100 bases:
>100_bases TAGATAGCGACGGTGACCAGTAGGTAACGCGGGGGAACAGGAATGGGGGCTCCCGAGTTTCAGTTATCACTTCTTGCGGG GAAGTGGGACAATATAGCCC
Downstream 100 bases:
>100_bases CTGGCGCGCCCCACCTCTTAGGCCCGCGCGCCTTAAATCGAGCGCTCGCGGTCGCGAAGCTCGCGTCGCAGGATCTTACC CGTGGAGGACTTCGGAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MTTSDNANNSNASADQPAAAQPTAAQPAAAQHAAGPANDPHFETALEDTLQEGLAPSVITVTGPDRPGVSAAFFRVLSSY GVQLLDIEQSVFRGKLSLAALVGVGQEDLEPLGEGLKETLASYGMRVSVEADDNLSSTRPHSTHVMVVLGRPLTATHISR IGQTLADYGANIDTITGIADYPVTGLELNLTVANPAPGGGVPLRKALATLTSEVGVDIAIERAGLARRAKRLICFDVDST LIQHEVIEMLAAYAGREEEVAAVTERAMRGELDFAESLHERVKALAGLDAAVVEKVAHDIQLTPGARTTIRTLKRLGYKA GVVSGGFIQVIEPLARDLDLDFARANTLEIVDGKLTGRVIGPVIDRQAKAESLKEFAWSNGIQLNQTVAVGDGANDIDML STAGLGIAFNAKPALKEIADASVNYPFLDQVLFILGISRHEIEDADLRDGTYRRVPIAED
Sequences:
>Translated_460_residues MTTSDNANNSNASADQPAAAQPTAAQPAAAQHAAGPANDPHFETALEDTLQEGLAPSVITVTGPDRPGVSAAFFRVLSSY GVQLLDIEQSVFRGKLSLAALVGVGQEDLEPLGEGLKETLASYGMRVSVEADDNLSSTRPHSTHVMVVLGRPLTATHISR IGQTLADYGANIDTITGIADYPVTGLELNLTVANPAPGGGVPLRKALATLTSEVGVDIAIERAGLARRAKRLICFDVDST LIQHEVIEMLAAYAGREEEVAAVTERAMRGELDFAESLHERVKALAGLDAAVVEKVAHDIQLTPGARTTIRTLKRLGYKA GVVSGGFIQVIEPLARDLDLDFARANTLEIVDGKLTGRVIGPVIDRQAKAESLKEFAWSNGIQLNQTVAVGDGANDIDML STAGLGIAFNAKPALKEIADASVNYPFLDQVLFILGISRHEIEDADLRDGTYRRVPIAED >Mature_459_residues TTSDNANNSNASADQPAAAQPTAAQPAAAQHAAGPANDPHFETALEDTLQEGLAPSVITVTGPDRPGVSAAFFRVLSSYG VQLLDIEQSVFRGKLSLAALVGVGQEDLEPLGEGLKETLASYGMRVSVEADDNLSSTRPHSTHVMVVLGRPLTATHISRI GQTLADYGANIDTITGIADYPVTGLELNLTVANPAPGGGVPLRKALATLTSEVGVDIAIERAGLARRAKRLICFDVDSTL IQHEVIEMLAAYAGREEEVAAVTERAMRGELDFAESLHERVKALAGLDAAVVEKVAHDIQLTPGARTTIRTLKRLGYKAG VVSGGFIQVIEPLARDLDLDFARANTLEIVDGKLTGRVIGPVIDRQAKAESLKEFAWSNGIQLNQTVAVGDGANDIDMLS TAGLGIAFNAKPALKEIADASVNYPFLDQVLFILGISRHEIEDADLRDGTYRRVPIAED
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=198, Percent_Identity=28.7878787878788, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1790849, Length=214, Percent_Identity=46.7289719626168, Blast_Score=176, Evalue=2e-45, Organism=Caenorhabditis elegans, GI115534454, Length=230, Percent_Identity=30.8695652173913, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI115534456, Length=228, Percent_Identity=30.7017543859649, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6321647, Length=295, Percent_Identity=37.6271186440678, Blast_Score=195, Evalue=2e-50, Organism=Drosophila melanogaster, GI24661601, Length=184, Percent_Identity=28.804347826087, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 48694; Mature: 48562
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSDNANNSNASADQPAAAQPTAAQPAAAQHAAGPANDPHFETALEDTLQEGLAPSVIT CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEE VTGPDRPGVSAAFFRVLSSYGVQLLDIEQSVFRGKLSLAALVGVGQEDLEPLGEGLKETL EECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ASYGMRVSVEADDNLSSTRPHSTHVMVVLGRPLTATHISRIGQTLADYGANIDTITGIAD HHCCEEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC YPVTGLELNLTVANPAPGGGVPLRKALATLTSEVGVDIAIERAGLARRAKRLICFDVDST CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHCEEEEEECHHH LIQHEVIEMLAAYAGREEEVAAVTERAMRGELDFAESLHERVKALAGLDAAVVEKVAHDI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHE QLTPGARTTIRTLKRLGYKAGVVSGGFIQVIEPLARDLDLDFARANTLEIVDGKLTGRVI EECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCEEEEECCCCCCHHH GPVIDRQAKAESLKEFAWSNGIQLNQTVAVGDGANDIDMLSTAGLGIAFNAKPALKEIAD HHHHHHHHHHHHHHHHHHCCCCEECEEEEECCCCCCHHHHHHCCCCEEECCCHHHHHHHH ASVNYPFLDQVLFILGISRHEIEDADLRDGTYRRVPIAED CCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCCCC >Mature Secondary Structure TTSDNANNSNASADQPAAAQPTAAQPAAAQHAAGPANDPHFETALEDTLQEGLAPSVIT CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEE VTGPDRPGVSAAFFRVLSSYGVQLLDIEQSVFRGKLSLAALVGVGQEDLEPLGEGLKETL EECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ASYGMRVSVEADDNLSSTRPHSTHVMVVLGRPLTATHISRIGQTLADYGANIDTITGIAD HHCCEEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC YPVTGLELNLTVANPAPGGGVPLRKALATLTSEVGVDIAIERAGLARRAKRLICFDVDST CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHCEEEEEECHHH LIQHEVIEMLAAYAGREEEVAAVTERAMRGELDFAESLHERVKALAGLDAAVVEKVAHDI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHE QLTPGARTTIRTLKRLGYKAGVVSGGFIQVIEPLARDLDLDFARANTLEIVDGKLTGRVI EECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCEEEEECCCCCCHHH GPVIDRQAKAESLKEFAWSNGIQLNQTVAVGDGANDIDMLSTAGLGIAFNAKPALKEIAD HHHHHHHHHHHHHHHHHHCCCCEECEEEEECCCCCCHHHHHHCCCCEEECCCHHHHHHHH ASVNYPFLDQVLFILGISRHEIEDADLRDGTYRRVPIAED CCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA