Definition Corynebacterium jeikeium K411, complete genome.
Accession NC_007164
Length 2,462,499

Click here to switch to the map view.

The map label for this gene is nrdH [H]

Identifier: 68535546

GI number: 68535546

Start: 580147

End: 580377

Strand: Direct

Name: nrdH [H]

Synonym: jk0476

Alternate gene names: 68535546

Gene position: 580147-580377 (Clockwise)

Preceding gene: 68535545

Following gene: 68535547

Centisome position: 23.56

GC content: 61.47

Gene sequence:

>231_bases
ATGATCACCGTCTACACCAAGCCCGCATGTGTTCAGTGCAACGCCACCAAGAAGGCCCTCGATAAGGCCGGTCTGGAGTA
CGAACTCGTGGACATCAGTCTCGACGACGAGGCTCGTGACTACGTCATGGCACTGGGCCACCTGCAGGCTCCCGTGGTTG
TCGCTGGGGAGGATCACTGGTCTGGCTTCCGCCCGGATCGCATCCGCTCCCTGACCGCCAAGGCCGCTTAA

Upstream 100 bases:

>100_bases
CGCCAGACTATCGCCCGCCAAGGCCGTTGCTGCGGCCAGTGCGAAGACCGACAAAGACCAACACCGATAGCGCCCACGAA
CCAGGAGAATGACAGCCACC

Downstream 100 bases:

>100_bases
CCCCCGCGCGTCGCTTCGCCTTCATCTACCAGGTGGGGGCTATTTTTGCGCGCGCCACTGTCTGAATGAGGCTCAATGCT
AATCACGTATTTTTCCTCCA

Product: glutaredoxin-like protein NrdH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MITVYTKPACVQCNATKKALDKAGLEYELVDISLDDEARDYVMALGHLQAPVVVAGEDHWSGFRPDRIRSLTAKAA

Sequences:

>Translated_76_residues
MITVYTKPACVQCNATKKALDKAGLEYELVDISLDDEARDYVMALGHLQAPVVVAGEDHWSGFRPDRIRSLTAKAA
>Mature_76_residues
MITVYTKPACVQCNATKKALDKAGLEYELVDISLDDEARDYVMALGHLQAPVVVAGEDHWSGFRPDRIRSLTAKAA

Specific function: Electron transport system for the ribonucleotide reductase system nrdEF [H]

COG id: COG0695

COG function: function code O; Glutaredoxin and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1789028, Length=70, Percent_Identity=47.1428571428571, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011909
- InterPro:   IPR002109
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 8335; Mature: 8335

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVYTKPACVQCNATKKALDKAGLEYELVDISLDDEARDYVMALGHLQAPVVVAGEDHW
CEEEECCCCEEEECCCHHHHHHCCCEEEEEEEEECCCHHHHHHHHCCCCCCEEEECCCCC
SGFRPDRIRSLTAKAA
CCCCCHHHHHEECCCC
>Mature Secondary Structure
MITVYTKPACVQCNATKKALDKAGLEYELVDISLDDEARDYVMALGHLQAPVVVAGEDHW
CEEEECCCCEEEECCCHHHHHHCCCEEEEEEEEECCCHHHHHHHHCCCCCCEEEECCCCC
SGFRPDRIRSLTAKAA
CCCCCHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8820648; 11677609 [H]