| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
Click here to switch to the map view.
The map label for this gene is pvdS2
Identifier: 68535334
GI number: 68535334
Start: 329392
End: 330282
Strand: Direct
Name: pvdS2
Synonym: jk0269
Alternate gene names: NA
Gene position: 329392-330282 (Clockwise)
Preceding gene: 68535333
Following gene: 68535338
Centisome position: 13.38
GC content: 60.49
Gene sequence:
>891_bases ATGGCCGAAGAAGAATTCCACATGGTTGATCTTGCCGCTACCGAGGGCTACTTGGTGGACGACTCGGATGAAGACGATCC GGTACTGATCACTCCGGACGGCCATCGGGTTGATACCTGGCGCGACCAGTACCCCTACGACGAGCGCATGAGCCGCGACG AGTACGAGACCACCAAGCGCGCCCTGCAGATCGAGCTGCTGAAGTTCCAAAACTGGACCAAGGACACGGGCCAGAAGCAC ATTATTATTTTCGAAGGCCGTGACGCCGCCGGTAAGGGCGGCACCATTAAGCGCTTCAACGAGCACCTGAACCCCCGTGG TGCCCGCACTGTGGCTCTGGAGAAGCCTTCCGAGCGCGAGTCCACCTCCTGGTACTTCCAGCGCTACGTCCAGCACTTCC CGTGCGGCGGCGAGATCGTCTTCTTCGACCGCTCCTGGTACAACCGCTCCGGCGTGGAGCGCGTGATGGGCTTCTGCACC AACGACCAGCACGAAGAGTTCCTGCGTGAGGTTCCGATGCTGGAGAACATGATTATGGGCTCGGGTATTTCCCTGACGAA GCTCTGGTTCTCCGTCACCCAGAAGGAGCAGCGCACCCGCTTTGCCATCCGCCAGGTGGACCCGGTCCGTCAGTGGAAGC TCTCTCCGATGGATCTGGCCTCCCTGGACAAGTGGGATGACTACACCCGCGCCAAGGAGGAGCAGTTCCGCTACACGGAC ACCAACGAGTCCCCGTGGATCACCATTAAGTCCAACGACAAGAAGCGCGCTCGCATCAACGCGATGCGCTACGTCCTGTC GAAGTTCGAGTACGCAGACAAGGACCATGAGGTCGTCGGCGAGCCGGATCCGAAGATCGTCAAGCGCGGCCGCGACCAGA TCGGCGACTAA
Upstream 100 bases:
>100_bases CCGTATGGTTCCGGCACATCTGTATAGCCGGACTAAAAGCACTAGAATGGAAAGTGCTAATAGAGTTTTAGAATCTTCAG GCGAAGGAGAACCCAGGCAC
Downstream 100 bases:
>100_bases TAGAACCCATTCGGACTGGCCGGATCGAGCCAGTACGCGAACAAGCCCCGGCTGCCCTACAAGGGCGACCGGGGCGTGTT TCTATAAAAGTTAGCTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MAEEEFHMVDLAATEGYLVDDSDEDDPVLITPDGHRVDTWRDQYPYDERMSRDEYETTKRALQIELLKFQNWTKDTGQKH IIIFEGRDAAGKGGTIKRFNEHLNPRGARTVALEKPSERESTSWYFQRYVQHFPCGGEIVFFDRSWYNRSGVERVMGFCT NDQHEEFLREVPMLENMIMGSGISLTKLWFSVTQKEQRTRFAIRQVDPVRQWKLSPMDLASLDKWDDYTRAKEEQFRYTD TNESPWITIKSNDKKRARINAMRYVLSKFEYADKDHEVVGEPDPKIVKRGRDQIGD
Sequences:
>Translated_296_residues MAEEEFHMVDLAATEGYLVDDSDEDDPVLITPDGHRVDTWRDQYPYDERMSRDEYETTKRALQIELLKFQNWTKDTGQKH IIIFEGRDAAGKGGTIKRFNEHLNPRGARTVALEKPSERESTSWYFQRYVQHFPCGGEIVFFDRSWYNRSGVERVMGFCT NDQHEEFLREVPMLENMIMGSGISLTKLWFSVTQKEQRTRFAIRQVDPVRQWKLSPMDLASLDKWDDYTRAKEEQFRYTD TNESPWITIKSNDKKRARINAMRYVLSKFEYADKDHEVVGEPDPKIVKRGRDQIGD >Mature_295_residues AEEEFHMVDLAATEGYLVDDSDEDDPVLITPDGHRVDTWRDQYPYDERMSRDEYETTKRALQIELLKFQNWTKDTGQKHI IIFEGRDAAGKGGTIKRFNEHLNPRGARTVALEKPSERESTSWYFQRYVQHFPCGGEIVFFDRSWYNRSGVERVMGFCTN DQHEEFLREVPMLENMIMGSGISLTKLWFSVTQKEQRTRFAIRQVDPVRQWKLSPMDLASLDKWDDYTRAKEEQFRYTDT NESPWITIKSNDKKRARINAMRYVLSKFEYADKDHEVVGEPDPKIVKRGRDQIGD
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34942; Mature: 34811
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEEFHMVDLAATEGYLVDDSDEDDPVLITPDGHRVDTWRDQYPYDERMSRDEYETTKR CCCCCEEEEEEECCCCEEECCCCCCCCEEECCCCCEECCCCCCCCCHHHCCCHHHHHHHH ALQIELLKFQNWTKDTGQKHIIIFEGRDAAGKGGTIKRFNEHLNPRGARTVALEKPSERE HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCC STSWYFQRYVQHFPCGGEIVFFDRSWYNRSGVERVMGFCTNDQHEEFLREVPMLENMIMG HHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHC SGISLTKLWFSVTQKEQRTRFAIRQVDPVRQWKLSPMDLASLDKWDDYTRAKEEQFRYTD CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHCCCCHHHHHHHHHHCCCCC TNESPWITIKSNDKKRARINAMRYVLSKFEYADKDHEVVGEPDPKIVKRGRDQIGD CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure AEEEFHMVDLAATEGYLVDDSDEDDPVLITPDGHRVDTWRDQYPYDERMSRDEYETTKR CCCCEEEEEEECCCCEEECCCCCCCCEEECCCCCEECCCCCCCCCHHHCCCHHHHHHHH ALQIELLKFQNWTKDTGQKHIIIFEGRDAAGKGGTIKRFNEHLNPRGARTVALEKPSERE HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCC STSWYFQRYVQHFPCGGEIVFFDRSWYNRSGVERVMGFCTNDQHEEFLREVPMLENMIMG HHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHC SGISLTKLWFSVTQKEQRTRFAIRQVDPVRQWKLSPMDLASLDKWDDYTRAKEEQFRYTD CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHCCCCHHHHHHHHHHCCCCC TNESPWITIKSNDKKRARINAMRYVLSKFEYADKDHEVVGEPDPKIVKRGRDQIGD CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA