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The map label for this gene is ybaR [H]

Identifier: 68535252

GI number: 68535252

Start: 235408

End: 236928

Strand: Direct

Name: ybaR [H]

Synonym: jk0187

Alternate gene names: 68535252

Gene position: 235408-236928 (Clockwise)

Preceding gene: 68535249

Following gene: 68535253

Centisome position: 9.56

GC content: 60.03

Gene sequence:

>1521_bases
TTGTTGGCTGCAGTAATAAGGAGCAAAGAAGATCCGGAGCGGTATCGGCCGGATCCGTCGCTGAAAGTAGCGCTGACGAC
CCCGCGGATCCTGGTTCGGGAGATGCTCGCCGGGCTGGTGGTGGGGCTGGCGCTGATCCCGGAGGCGATCTCTTTTGCCG
TTATCGCGGGCGTGGATCCGAAGGTAGGGCTTTTCTCGGCTTTCATCATGGCGGTAACAATTGCCTTTGTCGGCGGTCGC
CCGGCGATGATCTCCGCAGCGACGGGTGCAGTGGCGCTGGTGGTCGCACCGATTGCCCGGAACTACGGCATGGATTATCT
GATCGCCACCGTGCTGCTGGCAGGCGTGTTCCAAATCGTGCTGGCGGTTCTGGGGGTGGCGAAGCTGATGCGCTTCATCC
CGCGGAGCGTGATGGTCGGGTTCGTAAACTCCCTGGCAATCCTTATCTTTTCGGCGCAGATCCCGGAGCTGATTGATGTT
CCTTGGCTGGTCTACCCGCTGGTGGCGCTGGGGATCTTGCTGCTGGTGTTCTTCCCGAAGTTAACTACGGCCATTCCGGC
GCCGCTCGTTTCCATCGTGGTCGTCACGGTGCTGGTGGTGGTCTGTTCCATTTCCGTGCCGACAGTGGGCGACAAGGGTG
AGCTGCCGCGCAACCTGCCGGAGTTGTTTATCCCCCAGGTGCCGTGGAAGTTGGAGACGCTGCAGATCATTGCGCCCGTA
GCTTTCGCGATGGCGCTGGTGGGGCTGATGGAGTCCCTGATGACGGCGAAGCTGGTGGACGAGATCACCGATACTCACTC
GAACAAGACCCGCGAGAGCTTCGGTCAGGGCATCGCAAACATTGCTTCCGGCCTTTTCGGCGGAATGGGCGGTTGCGCGA
TGATCGGCCAGACGATGATCAACGTGAAGGCGTCGGGCGCGAGGACTCGCATTTCTACCTTCATGGCGGGCGTTTTCTTG
CTCTTCCTGCTGCTGGTGCTGGGGGACATCGTGGCGATCATTCCGATGGCGGCGCTGGTCGCGGTGATGGTGATGGTTTC
TGTGGGCACTTTCGACTGGCACTCGATTAAGCCGTCGACGTTGAAGCGGATGCCGAAGAGCGAAACCTCCGTGATGGTGC
TTATCGTTGTGGTGGTTGTGGCCACCCACAACCTGGCGATCGGCGTGGTGGTAGGTGTGATGATGGCCAGTGTGATGTTC
GTGCGCCGCGTGGCCCACCTGATTGATGTGCGTCGCGAGGTTGATGACGCCGCAGCTTTGGTTCGCTACACGGTCGAGGG
ACAGCTGCTGTTTGCATCTAGCAACGACCTCACCACGCAGTTTGAGTACGCGCAGGACCCAGATCGGGTTGTTATTGATT
TCTCGAAGTCCAACATTTGGGACGCTTCTTCGGTGGCTGCGCTGGACACCATTGAGAACAAGTACCGGCAGCGTGGGAAG
ACGGTGGAGTTTGTGGGGATGAACGAGTTCTCCTCGGCCTTCCATACGCGCCTGACGGGCGAGCTGGGTGGCGAAGGCTA
G

Upstream 100 bases:

>100_bases
GGTGGGGGTTGGGTTGGATTGGCAGAGCTGGGCTGGCGGGGCGGAAAGCGCAGCCGGTATAACAATGATTGTTCTGAAGT
GATTAAGAGGGGTGCCTGGT

Downstream 100 bases:

>100_bases
TGGCAGATCTGACAGGCCAGGAACAGACCGGGGTAGGCGGGGCAGTGCTGAAGTTTGATGCCCTGAAGTCTGAGGTCTTC
CCCAGAAGTGAGCTGTTGGC

Product: putative sulfate permease family protein

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MLAAVIRSKEDPERYRPDPSLKVALTTPRILVREMLAGLVVGLALIPEAISFAVIAGVDPKVGLFSAFIMAVTIAFVGGR
PAMISAATGAVALVVAPIARNYGMDYLIATVLLAGVFQIVLAVLGVAKLMRFIPRSVMVGFVNSLAILIFSAQIPELIDV
PWLVYPLVALGILLLVFFPKLTTAIPAPLVSIVVVTVLVVVCSISVPTVGDKGELPRNLPELFIPQVPWKLETLQIIAPV
AFAMALVGLMESLMTAKLVDEITDTHSNKTRESFGQGIANIASGLFGGMGGCAMIGQTMINVKASGARTRISTFMAGVFL
LFLLLVLGDIVAIIPMAALVAVMVMVSVGTFDWHSIKPSTLKRMPKSETSVMVLIVVVVVATHNLAIGVVVGVMMASVMF
VRRVAHLIDVRREVDDAAALVRYTVEGQLLFASSNDLTTQFEYAQDPDRVVIDFSKSNIWDASSVAALDTIENKYRQRGK
TVEFVGMNEFSSAFHTRLTGELGGEG

Sequences:

>Translated_506_residues
MLAAVIRSKEDPERYRPDPSLKVALTTPRILVREMLAGLVVGLALIPEAISFAVIAGVDPKVGLFSAFIMAVTIAFVGGR
PAMISAATGAVALVVAPIARNYGMDYLIATVLLAGVFQIVLAVLGVAKLMRFIPRSVMVGFVNSLAILIFSAQIPELIDV
PWLVYPLVALGILLLVFFPKLTTAIPAPLVSIVVVTVLVVVCSISVPTVGDKGELPRNLPELFIPQVPWKLETLQIIAPV
AFAMALVGLMESLMTAKLVDEITDTHSNKTRESFGQGIANIASGLFGGMGGCAMIGQTMINVKASGARTRISTFMAGVFL
LFLLLVLGDIVAIIPMAALVAVMVMVSVGTFDWHSIKPSTLKRMPKSETSVMVLIVVVVVATHNLAIGVVVGVMMASVMF
VRRVAHLIDVRREVDDAAALVRYTVEGQLLFASSNDLTTQFEYAQDPDRVVIDFSKSNIWDASSVAALDTIENKYRQRGK
TVEFVGMNEFSSAFHTRLTGELGGEG
>Mature_506_residues
MLAAVIRSKEDPERYRPDPSLKVALTTPRILVREMLAGLVVGLALIPEAISFAVIAGVDPKVGLFSAFIMAVTIAFVGGR
PAMISAATGAVALVVAPIARNYGMDYLIATVLLAGVFQIVLAVLGVAKLMRFIPRSVMVGFVNSLAILIFSAQIPELIDV
PWLVYPLVALGILLLVFFPKLTTAIPAPLVSIVVVTVLVVVCSISVPTVGDKGELPRNLPELFIPQVPWKLETLQIIAPV
AFAMALVGLMESLMTAKLVDEITDTHSNKTRESFGQGIANIASGLFGGMGGCAMIGQTMINVKASGARTRISTFMAGVFL
LFLLLVLGDIVAIIPMAALVAVMVMVSVGTFDWHSIKPSTLKRMPKSETSVMVLIVVVVVATHNLAIGVVVGVMMASVMF
VRRVAHLIDVRREVDDAAALVRYTVEGQLLFASSNDLTTQFEYAQDPDRVVIDFSKSNIWDASSVAALDTIENKYRQRGK
TVEFVGMNEFSSAFHTRLTGELGGEG

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Escherichia coli, GI87081859, Length=536, Percent_Identity=28.544776119403, Blast_Score=169, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI17566848, Length=509, Percent_Identity=24.3614931237721, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI86565215, Length=491, Percent_Identity=20.9775967413442, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24649801, Length=529, Percent_Identity=23.2514177693762, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI19922482, Length=128, Percent_Identity=35.9375, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI21358229, Length=399, Percent_Identity=24.5614035087719, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24663084, Length=146, Percent_Identity=31.5068493150685, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21357695, Length=146, Percent_Identity=31.5068493150685, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI85815873, Length=423, Percent_Identity=22.9314420803783, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24647160, Length=127, Percent_Identity=29.1338582677165, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21355087, Length=127, Percent_Identity=29.1338582677165, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 54153; Mature: 54153

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAVIRSKEDPERYRPDPSLKVALTTPRILVREMLAGLVVGLALIPEAISFAVIAGVDP
CCHHHHCCCCCCHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KVGLFSAFIMAVTIAFVGGRPAMISAATGAVALVVAPIARNYGMDYLIATVLLAGVFQIV
CHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LAVLGVAKLMRFIPRSVMVGFVNSLAILIFSAQIPELIDVPWLVYPLVALGILLLVFFPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHH
LTTAIPAPLVSIVVVTVLVVVCSISVPTVGDKGELPRNLPELFIPQVPWKLETLQIIAPV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHH
AFAMALVGLMESLMTAKLVDEITDTHSNKTRESFGQGIANIASGLFGGMGGCAMIGQTMI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NVKASGARTRISTFMAGVFLLFLLLVLGDIVAIIPMAALVAVMVMVSVGTFDWHSIKPST
HEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LKRMPKSETSVMVLIVVVVVATHNLAIGVVVGVMMASVMFVRRVAHLIDVRREVDDAAAL
HHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRYTVEGQLLFASSNDLTTQFEYAQDPDRVVIDFSKSNIWDASSVAALDTIENKYRQRGK
HHHEECCEEEEECCCCCCEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC
TVEFVGMNEFSSAFHTRLTGELGGEG
EEEEECCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLAAVIRSKEDPERYRPDPSLKVALTTPRILVREMLAGLVVGLALIPEAISFAVIAGVDP
CCHHHHCCCCCCHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KVGLFSAFIMAVTIAFVGGRPAMISAATGAVALVVAPIARNYGMDYLIATVLLAGVFQIV
CHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LAVLGVAKLMRFIPRSVMVGFVNSLAILIFSAQIPELIDVPWLVYPLVALGILLLVFFPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHH
LTTAIPAPLVSIVVVTVLVVVCSISVPTVGDKGELPRNLPELFIPQVPWKLETLQIIAPV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHH
AFAMALVGLMESLMTAKLVDEITDTHSNKTRESFGQGIANIASGLFGGMGGCAMIGQTMI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NVKASGARTRISTFMAGVFLLFLLLVLGDIVAIIPMAALVAVMVMVSVGTFDWHSIKPST
HEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LKRMPKSETSVMVLIVVVVVATHNLAIGVVVGVMMASVMFVRRVAHLIDVRREVDDAAAL
HHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRYTVEGQLLFASSNDLTTQFEYAQDPDRVVIDFSKSNIWDASSVAALDTIENKYRQRGK
HHHEECCEEEEECCCCCCEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC
TVEFVGMNEFSSAFHTRLTGELGGEG
EEEEECCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]