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The map label for this gene is farR [C]

Identifier: 68535151

GI number: 68535151

Start: 105392

End: 105766

Strand: Direct

Name: farR [C]

Synonym: jk0088

Alternate gene names: 68535151

Gene position: 105392-105766 (Clockwise)

Preceding gene: 68535147

Following gene: 68535152

Centisome position: 4.28

GC content: 58.13

Gene sequence:

>375_bases
ATGAATGAATCGTCGACTCCGCTTTTTCAGCAGGTCGCAGACCTCATCGCGGACGCGATCGTGGATGGGTCGCTTCCTGA
GGGCGAACGCGCGCCATCGACAAATGAACTCGCAGAATTTCACAGCATCAACCCCGCAACCGCCAGAAAAGGGTTGGCGC
TGCTTGTCGATCAGGACGTGTTGGCCAAGAGGCGCGGCGTGGGAATGTTCGTTGAACACGGCGCCCGCGAGCGAATCCTG
GCCCTGCGTAAGGAGGCTTTCGCCGCCAGCTATTTGGTTCCCCTCGTCGACGAGGCCGCCAAGTTGGGCATGAATCGCAC
ACAGCTGAAAACCCTCATGGACAAAGTCGCAGAAAGTCGAGGACTCTACGAATGA

Upstream 100 bases:

>100_bases
TTACACAAGTAACCAACCAACTAACTAGGTGTGTTGAGAATGCACTGAGGTACAGAGCGCACTGGGAACTTGTTAAGCAG
CCCGCGGAAGGAGGTGTCCC

Downstream 100 bases:

>100_bases
TTGCCACTACGTATCCCGACGCAGCCTCTGGCGTCGCTCCCGACATCGAGCTGCGCGACGTTAGGCGCAAGCTCGGCTCC
ACTCACGCCCTCGATGGCGT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Regulatory Protein GntR HTH; Transcription Regulator; Transcriptional Regulator Gntr Family; Transcriptional Regulatory Protein; Transcriptional Regulator GntR Family Protein

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNESSTPLFQQVADLIADAIVDGSLPEGERAPSTNELAEFHSINPATARKGLALLVDQDVLAKRRGVGMFVEHGARERIL
ALRKEAFAASYLVPLVDEAAKLGMNRTQLKTLMDKVAESRGLYE

Sequences:

>Translated_124_residues
MNESSTPLFQQVADLIADAIVDGSLPEGERAPSTNELAEFHSINPATARKGLALLVDQDVLAKRRGVGMFVEHGARERIL
ALRKEAFAASYLVPLVDEAAKLGMNRTQLKTLMDKVAESRGLYE
>Mature_124_residues
MNESSTPLFQQVADLIADAIVDGSLPEGERAPSTNELAEFHSINPATARKGLALLVDQDVLAKRRGVGMFVEHGARERIL
ALRKEAFAASYLVPLVDEAAKLGMNRTQLKTLMDKVAESRGLYE

Specific function: Possible Transcriptional Regulator Of The Succinyl-CoA- Synthetase Operon. Binds Specifically To The Farr Promoter And Exhibits Weak Binding To The Citrate Synthase And Lipoamide Dehydrogenase Promoters. Binding At The Farr Promoter Is Abolished By Long-

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13523; Mature: 13523

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNESSTPLFQQVADLIADAIVDGSLPEGERAPSTNELAEFHSINPATARKGLALLVDQDV
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCHHEECHHH
LAKRRGVGMFVEHGARERILALRKEAFAASYLVPLVDEAAKLGMNRTQLKTLMDKVAESR
HHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GLYE
CCCC
>Mature Secondary Structure
MNESSTPLFQQVADLIADAIVDGSLPEGERAPSTNELAEFHSINPATARKGLALLVDQDV
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCHHEECHHH
LAKRRGVGMFVEHGARERILALRKEAFAASYLVPLVDEAAKLGMNRTQLKTLMDKVAESR
HHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GLYE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA