| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is ydfG [C]
Identifier: 68535121
GI number: 68535121
Start: 65259
End: 66065
Strand: Direct
Name: ydfG [C]
Synonym: jk0059
Alternate gene names: 68535121
Gene position: 65259-66065 (Clockwise)
Preceding gene: 68535118
Following gene: 68535125
Centisome position: 2.65
GC content: 63.07
Gene sequence:
>807_bases ATGAGTTCTACTAATGCAGAGTTCACGAATGCACAGGCCACGAATGCACAGGCTACGTCCACCCCACCCACCAACTCCCG CGTCGCCGTCGTCACCGGCGCGAGCGCGGGTATCGGCGAGGCTACCGCTAAGCTGCTGGCCGCCGATGGTTGGCACGTGG TGCTGGCCGCGCGCCGTGCAGAAAAGTTAGAGCAGGTCGCGCAAGCGATCACCCAGGAGGGCGGTAAGGCTACGCCACTT GTGCTCGATGTGACGGATAGGGCGTCCATAGATAACTTCACCGCAGCGCTAGCCGAGCTGACGGGCTCCAAGCTAGACCT GCTGGTTAACAACGCAGGTGGCGCGCGGGGGCTCGACCCGGTGCTGGAAGCCGATCCGAAAGATTGGCGCTGGATGTTTG AAGCGAACGTGATGGGCACCCTGGAAGTCACGCGCGCGCTGTTCGATCAACTGCAGGTGGCGGACGCGCCACAGGTTATC AATGTGGTTTCCGTTGCAGGTCGCGGAGCCTACCGAGGGGGTGCGGGTTACAACGCGGCGAAGTTCGGGCAGACCGCGCT CACCGACGTGATGCGCATGGAATTCGCCGAGGCGGGCGTGCGCGTATGCCAGGTCGATCCGGGCCGGGTGGCCACTGACT TCAGCCTGAACCGCTTCAAGGGCGATGCCGAGCGCGCCGAGGAGGTTTACGCGGATAAGCTAAACCTGCAGGCAGAGGAC ATTGGCGAGGTTATTCGCTGGATCGCGGATCGCCCCCGCCACATGGACGTGGAGTCCATCATGATCCGCCCGCTCGACCA GGTTTAA
Upstream 100 bases:
>100_bases TTAATGCATAGCTTTCTCTATTGCAGTGTTCTGCAGGGATTGCCTCCAGCCAAAACTAAACAGCCCCCGCGGCCTGTGCT TGGTCGCTACATTGGAATTC
Downstream 100 bases:
>100_bases AGCTCAGCGCTCGGGATGGCTCGGCGGGTCAGTCTCGCCGGGTTAACCCCGGCAACCAGGAGCTACTGGAAGGTGACGGC GGTGCCGGTCGCGCTGACCA
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSSTNAEFTNAQATNAQATSTPPTNSRVAVVTGASAGIGEATAKLLAADGWHVVLAARRAEKLEQVAQAITQEGGKATPL VLDVTDRASIDNFTAALAELTGSKLDLLVNNAGGARGLDPVLEADPKDWRWMFEANVMGTLEVTRALFDQLQVADAPQVI NVVSVAGRGAYRGGAGYNAAKFGQTALTDVMRMEFAEAGVRVCQVDPGRVATDFSLNRFKGDAERAEEVYADKLNLQAED IGEVIRWIADRPRHMDVESIMIRPLDQV
Sequences:
>Translated_268_residues MSSTNAEFTNAQATNAQATSTPPTNSRVAVVTGASAGIGEATAKLLAADGWHVVLAARRAEKLEQVAQAITQEGGKATPL VLDVTDRASIDNFTAALAELTGSKLDLLVNNAGGARGLDPVLEADPKDWRWMFEANVMGTLEVTRALFDQLQVADAPQVI NVVSVAGRGAYRGGAGYNAAKFGQTALTDVMRMEFAEAGVRVCQVDPGRVATDFSLNRFKGDAERAEEVYADKLNLQAED IGEVIRWIADRPRHMDVESIMIRPLDQV >Mature_267_residues SSTNAEFTNAQATNAQATSTPPTNSRVAVVTGASAGIGEATAKLLAADGWHVVLAARRAEKLEQVAQAITQEGGKATPLV LDVTDRASIDNFTAALAELTGSKLDLLVNNAGGARGLDPVLEADPKDWRWMFEANVMGTLEVTRALFDQLQVADAPQVIN VVSVAGRGAYRGGAGYNAAKFGQTALTDVMRMEFAEAGVRVCQVDPGRVATDFSLNRFKGDAERAEEVYADKLNLQAEDI GEVIRWIADRPRHMDVESIMIRPLDQV
Specific function: Unknown
COG id: COG4221
COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI109715829, Length=251, Percent_Identity=32.2709163346614, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI19923817, Length=198, Percent_Identity=26.2626262626263, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI32483357, Length=221, Percent_Identity=28.5067873303167, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI20149619, Length=207, Percent_Identity=28.0193236714976, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI7706318, Length=243, Percent_Identity=28.8065843621399, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI5031737, Length=219, Percent_Identity=30.1369863013699, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI19743808, Length=220, Percent_Identity=29.0909090909091, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI40548397, Length=190, Percent_Identity=31.0526315789474, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI214010158, Length=190, Percent_Identity=31.0526315789474, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI214010156, Length=190, Percent_Identity=31.0526315789474, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI22758144, Length=190, Percent_Identity=31.0526315789474, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI50726952, Length=200, Percent_Identity=37, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI150247226, Length=187, Percent_Identity=31.0160427807487, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI22507405, Length=189, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI33667109, Length=190, Percent_Identity=30.5263157894737, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI126723191, Length=200, Percent_Identity=27, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI166795268, Length=212, Percent_Identity=32.0754716981132, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI40254986, Length=187, Percent_Identity=29.9465240641711, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI40254992, Length=190, Percent_Identity=28.9473684210526, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1787820, Length=242, Percent_Identity=33.8842975206612, Blast_Score=137, Evalue=6e-34, Organism=Escherichia coli, GI1787335, Length=242, Percent_Identity=31.8181818181818, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787526, Length=216, Percent_Identity=30.5555555555556, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI87082100, Length=190, Percent_Identity=31.0526315789474, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1786701, Length=238, Percent_Identity=25.6302521008403, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI2367175, Length=240, Percent_Identity=29.5833333333333, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789057, Length=181, Percent_Identity=29.8342541436464, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1787905, Length=192, Percent_Identity=29.1666666666667, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI87082160, Length=208, Percent_Identity=25.9615384615385, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789208, Length=211, Percent_Identity=29.8578199052133, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788459, Length=191, Percent_Identity=28.2722513089005, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786812, Length=243, Percent_Identity=26.7489711934156, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1790717, Length=186, Percent_Identity=27.4193548387097, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17560332, Length=247, Percent_Identity=31.1740890688259, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17562910, Length=242, Percent_Identity=30.5785123966942, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17560676, Length=202, Percent_Identity=31.1881188118812, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71994600, Length=209, Percent_Identity=30.1435406698565, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17560150, Length=247, Percent_Identity=30.3643724696356, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17559104, Length=245, Percent_Identity=30.2040816326531, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17562904, Length=250, Percent_Identity=28.8, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17563726, Length=253, Percent_Identity=29.6442687747036, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17538486, Length=243, Percent_Identity=28.8065843621399, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI193204405, Length=249, Percent_Identity=30.5220883534137, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17565030, Length=243, Percent_Identity=31.6872427983539, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562908, Length=243, Percent_Identity=30.0411522633745, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17536025, Length=247, Percent_Identity=27.9352226720648, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17551412, Length=242, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71994604, Length=234, Percent_Identity=28.6324786324786, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17544670, Length=248, Percent_Identity=29.0322580645161, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17538480, Length=246, Percent_Identity=28.4552845528455, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17562990, Length=241, Percent_Identity=29.045643153527, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17562906, Length=244, Percent_Identity=30.7377049180328, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71982365, Length=186, Percent_Identity=30.1075268817204, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI72000259, Length=242, Percent_Identity=28.5123966942149, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17558628, Length=190, Percent_Identity=31.5789473684211, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=25.4901960784314, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17531453, Length=252, Percent_Identity=27.3809523809524, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI115534660, Length=187, Percent_Identity=29.9465240641711, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17536651, Length=251, Percent_Identity=27.0916334661355, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=246, Percent_Identity=37.8048780487805, Blast_Score=154, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6322067, Length=193, Percent_Identity=34.7150259067358, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI116007236, Length=250, Percent_Identity=31.6, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI28571387, Length=252, Percent_Identity=32.1428571428571, Blast_Score=98, Evalue=5e-21, Organism=Drosophila melanogaster, GI21358495, Length=232, Percent_Identity=31.8965517241379, Blast_Score=91, Evalue=8e-19, Organism=Drosophila melanogaster, GI24641388, Length=254, Percent_Identity=31.496062992126, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24648693, Length=253, Percent_Identity=31.6205533596838, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI21355889, Length=253, Percent_Identity=31.6205533596838, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24641232, Length=256, Percent_Identity=29.6875, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI281364494, Length=254, Percent_Identity=28.740157480315, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI23397609, Length=198, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI28571526, Length=216, Percent_Identity=34.2592592592593, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24643142, Length=219, Percent_Identity=30.5936073059361, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI21357041, Length=194, Percent_Identity=29.8969072164948, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24663911, Length=250, Percent_Identity=29.2, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24639444, Length=228, Percent_Identity=29.8245614035088, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI116007234, Length=260, Percent_Identity=30, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI21355319, Length=192, Percent_Identity=29.6875, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI116007238, Length=185, Percent_Identity=32.4324324324324, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI21357673, Length=191, Percent_Identity=30.3664921465969, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24640442, Length=192, Percent_Identity=32.8125, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24644339, Length=189, Percent_Identity=30.6878306878307, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648944, Length=250, Percent_Identity=29.2, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI17737361, Length=199, Percent_Identity=30.6532663316583, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24580925, Length=214, Percent_Identity=31.3084112149533, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI116007232, Length=186, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 28642; Mature: 28511
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTNAEFTNAQATNAQATSTPPTNSRVAVVTGASAGIGEATAKLLAADGWHVVLAARRA CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEHHHHHH EKLEQVAQAITQEGGKATPLVLDVTDRASIDNFTAALAELTGSKLDLLVNNAGGARGLDP HHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCH VLEADPKDWRWMFEANVMGTLEVTRALFDQLQVADAPQVINVVSVAGRGAYRGGAGYNAA HHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHH KFGQTALTDVMRMEFAEAGVRVCQVDPGRVATDFSLNRFKGDAERAEEVYADKLNLQAED HHCHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCHHHHCCHHHHHHHHHHHHCCCCHHH IGEVIRWIADRPRHMDVESIMIRPLDQV HHHHHHHHHCCCCCCCHHHHHHCCCCCC >Mature Secondary Structure SSTNAEFTNAQATNAQATSTPPTNSRVAVVTGASAGIGEATAKLLAADGWHVVLAARRA CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEHHHHHH EKLEQVAQAITQEGGKATPLVLDVTDRASIDNFTAALAELTGSKLDLLVNNAGGARGLDP HHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCH VLEADPKDWRWMFEANVMGTLEVTRALFDQLQVADAPQVINVVSVAGRGAYRGGAGYNAA HHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHH KFGQTALTDVMRMEFAEAGVRVCQVDPGRVATDFSLNRFKGDAERAEEVYADKLNLQAED HHCHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCHHHHCCHHHHHHHHHHHHCCCCHHH IGEVIRWIADRPRHMDVESIMIRPLDQV HHHHHHHHHCCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]