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The map label for this gene is rpfC

Identifier: 68535113

GI number: 68535113

Start: 58288

End: 58638

Strand: Direct

Name: rpfC

Synonym: jk0051

Alternate gene names: NA

Gene position: 58288-58638 (Clockwise)

Preceding gene: 68535112

Following gene: 68535115

Centisome position: 2.37

GC content: 65.24

Gene sequence:

>351_bases
ATGAATAAGTCCGTAAAGACCGCTTTCGCCCGCATCGGCATGGCCGCAGGCCTGGTTGCTGCTCCGGCAGCCGCCGCAGC
TGTGGCAGCTCCGGCCGCGCAGGCCGCACCAGTTAGCGCCTGGGATCAGGTCGCACAGTGCGAGTCCGGCGGCAACTGGA
AGATCAACACGGGCAACGGCTACTACGGCGGGCTGCAATTCAGCGCTCAGACTTGGGCTGGCTTCGGCGGTACGAAGTAC
GCCCCGACGGCTAACCAGGCCACGAAGGCGCAGCAGATCGAGATTGCCGAGAAGGTTCTGGCCAAGCAGGGCGCAGGCGC
TTGGCCGAACTGCGGCAAGGTGCTCGGCTAA

Upstream 100 bases:

>100_bases
AATTGCCAGCGTGCAGCCGCAAAGCGCGGCCGCGTAGACACCAAACAATCGATATGGAGCCAGCCACTCGGCCGGCTTCG
CAGAAGGAGTTTTCGTCTAC

Downstream 100 bases:

>100_bases
ATGCTGAGCTAGGTACCGGATTAATCAAGTACCGCGCTAGCTTAGGCGTCCAGGTACTTTTCCGGAATATCGAGAGCCAC
CAGGTCCTCCCGGGACTTGG

Product: resuscitation-promoting factor RpfC

Products: NA

Alternate protein names: Transglycosylase Domain-Containing Protein; Transglycosylase Domain Protein; Resuscitation-Promoting Factor; Resuscitation-Promoting Factor RpfA; Transglycosylase-Like Protein; Resuscitation-Promoting Factor RpfB; Peptidase; Transglycosylase-Like Domain Protein; Transglycosylase Family Protein; M23 Family Secreted Peptidase; Resuscitation-Promoting Factor RpfC; M23 Peptidase Domain-Containing Protein; N-Acetylmuramoyl-L-Alanine Amidase; Resuscitation-Promoting Factor RpfE; Resuscitation-Promoting Factor-Like Protein; Transglycosylase; Secreted Esterase; G5 Domain Transglycosylase; Resuscitation-Promoting Factor Rpfa; Vegetative Cell Wall; FHA Domain-Containing Protein; Cell Wall Function Protein; Resuscitation-Promoting Factor Rpfc; Resuscitation-Promoting Factor Rpfe; Resuscitation-Promoting Factor RpfD; FG-GAP Repeat Domain-Containing Protein; Resuscitation-Promoting Factor Rpfd; LOW QUALITY PROTEIN Lipoprotein; Resuscitation-Promoting Factor Rpfb; Secreted Transglycosydase; Cell Wall Catabolism Protein; Transglycosylase-Like Domain-Containing Protein; Lipoprotein; M24/M37 Family Peptidase

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MNKSVKTAFARIGMAAGLVAAPAAAAAVAAPAAQAAPVSAWDQVAQCESGGNWKINTGNGYYGGLQFSAQTWAGFGGTKY
APTANQATKAQQIEIAEKVLAKQGAGAWPNCGKVLG

Sequences:

>Translated_116_residues
MNKSVKTAFARIGMAAGLVAAPAAAAAVAAPAAQAAPVSAWDQVAQCESGGNWKINTGNGYYGGLQFSAQTWAGFGGTKY
APTANQATKAQQIEIAEKVLAKQGAGAWPNCGKVLG
>Mature_116_residues
MNKSVKTAFARIGMAAGLVAAPAAAAAVAAPAAQAAPVSAWDQVAQCESGGNWKINTGNGYYGGLQFSAQTWAGFGGTKY
APTANQATKAQQIEIAEKVLAKQGAGAWPNCGKVLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11641; Mature: 11641

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSVKTAFARIGMAAGLVAAPAAAAAVAAPAAQAAPVSAWDQVAQCESGGNWKINTGNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCCC
YYGGLQFSAQTWAGFGGTKYAPTANQATKAQQIEIAEKVLAKQGAGAWPNCGKVLG
CCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKSVKTAFARIGMAAGLVAAPAAAAAVAAPAAQAAPVSAWDQVAQCESGGNWKINTGNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCCC
YYGGLQFSAQTWAGFGGTKYAPTANQATKAQQIEIAEKVLAKQGAGAWPNCGKVLG
CCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA