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The map label for this gene is tnp1513a [H]

Identifier: 68535077

GI number: 68535077

Start: 21010

End: 22134

Strand: Direct

Name: tnp1513a [H]

Synonym: jk0015

Alternate gene names: 68535077

Gene position: 21010-22134 (Clockwise)

Preceding gene: 68535075

Following gene: 68535078

Centisome position: 0.85

GC content: 55.02

Gene sequence:

>1125_bases
ATGCCAGCACCGATGAAAACTCAAGCCGTTGATGGATTTCCTAGCGGCGTATTCGACAAACACGCCTTAGTAGGGCGTGG
TCGCAGGCTTACTGTTGAAGACCGTGTTGCTATTGAAGCGGGATGTCGTGTCGGTGATTCGGCACGAGCCATCGCGCAGA
AAATAAATAGGCACCACAGTGTCGTCGCTCGTGAAATCACCCGTAATGGTTGGAAGATCGTCGATGAGGACGGCACAGAG
CAGCTGCGGTATAACGCCCACAACGCTGCTGTTTCTACTGCTGGTCGGATGGTGCGGCCAAAACTACGCAAGCTCGATGA
AAGCCCAACGCTTCGGGGTGTAGTAGTCGATTGCCTTGCCCGCAGGTGGTCACCTGGGCGCATTAGTGCATGGCTTGAGC
ATGCTTTCAGCGATGATGAAAGCATGCGTATTTCCCACGAAGCGATCTACAGTGCCTTATACATTCAAGGCAAAGGCAGC
CTGCGAGCCGAGCTTGAAGAAGTCATGAAGACTAAAGACGTACTTATCCGCGGCGGCTCAACACGCAAGCGTCGTGCCCG
AAACGCTGGCGTGTTAACCGGTCGCCCTTGGATCAAAGGTGCTGAGATCACCCACCGCAGCCCGGAAGCTGATGACAGGG
CTATTCCCGGGCACTGGGAGGGCGACCTTGTTATTGGTAAAGGTGGCAAAAGCGCGCTGATTACCCTAGTAGAGCGCACC
AGCCGTTACACCCTGCTTGGACACCTTCCCGATGAGCACAGTTCACACACCGTGGTCGCAACCCTGCAGGACATGGTCAA
AGACCTCAACACCGAGCAGCTAAAGACCATCACATGGGACCAAGGCGCAGAAATGGCTGTCACAGCACAAGTCCAGATTA
AAGACGGCTGCCAGGTGTTTTTCTGTGAACCGCACTCACCGTGGCAGAGACCAACCAACGAGAACACCAACGGCGAGATC
AGGCGCAGGTTCTACAAAAAGGGCACCGACTTTGCCACCGTCACACCCGAACATGTCGCGTGGGTGCAAAATGAGCTCAA
CGAAACACCCCGACAAATCCTCGGCGGCGCAACCCCACGTGAAATACTTAACGAACTATTCAAGCGTGGCGCATCCACCG
CTTGA

Upstream 100 bases:

>100_bases
GCGGTATGCGAAGTTACGCCGGCAGCGACATCGTCGAACGCCTGATGAGGCGGTGGTGTCTTTGCCAGATACAGGCAAGA
AGCTGGGTAAAGATTCTGTT

Downstream 100 bases:

>100_bases
TTCCGCCCCCCTGGCTTGAACATATGGCGATGAAAACTAGACTTCAAGTAGTTGAACTTTTGGTATGGAGATGCCTATGC
GTAAGACCTTAATCAGCCTC

Product: transposase for IS1513a

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MPAPMKTQAVDGFPSGVFDKHALVGRGRRLTVEDRVAIEAGCRVGDSARAIAQKINRHHSVVAREITRNGWKIVDEDGTE
QLRYNAHNAAVSTAGRMVRPKLRKLDESPTLRGVVVDCLARRWSPGRISAWLEHAFSDDESMRISHEAIYSALYIQGKGS
LRAELEEVMKTKDVLIRGGSTRKRRARNAGVLTGRPWIKGAEITHRSPEADDRAIPGHWEGDLVIGKGGKSALITLVERT
SRYTLLGHLPDEHSSHTVVATLQDMVKDLNTEQLKTITWDQGAEMAVTAQVQIKDGCQVFFCEPHSPWQRPTNENTNGEI
RRRFYKKGTDFATVTPEHVAWVQNELNETPRQILGGATPREILNELFKRGASTA

Sequences:

>Translated_374_residues
MPAPMKTQAVDGFPSGVFDKHALVGRGRRLTVEDRVAIEAGCRVGDSARAIAQKINRHHSVVAREITRNGWKIVDEDGTE
QLRYNAHNAAVSTAGRMVRPKLRKLDESPTLRGVVVDCLARRWSPGRISAWLEHAFSDDESMRISHEAIYSALYIQGKGS
LRAELEEVMKTKDVLIRGGSTRKRRARNAGVLTGRPWIKGAEITHRSPEADDRAIPGHWEGDLVIGKGGKSALITLVERT
SRYTLLGHLPDEHSSHTVVATLQDMVKDLNTEQLKTITWDQGAEMAVTAQVQIKDGCQVFFCEPHSPWQRPTNENTNGEI
RRRFYKKGTDFATVTPEHVAWVQNELNETPRQILGGATPREILNELFKRGASTA
>Mature_373_residues
PAPMKTQAVDGFPSGVFDKHALVGRGRRLTVEDRVAIEAGCRVGDSARAIAQKINRHHSVVAREITRNGWKIVDEDGTEQ
LRYNAHNAAVSTAGRMVRPKLRKLDESPTLRGVVVDCLARRWSPGRISAWLEHAFSDDESMRISHEAIYSALYIQGKGSL
RAELEEVMKTKDVLIRGGSTRKRRARNAGVLTGRPWIKGAEITHRSPEADDRAIPGHWEGDLVIGKGGKSALITLVERTS
RYTLLGHLPDEHSSHTVVATLQDMVKDLNTEQLKTITWDQGAEMAVTAQVQIKDGCQVFFCEPHSPWQRPTNENTNGEIR
RRFYKKGTDFATVTPEHVAWVQNELNETPRQILGGATPREILNELFKRGASTA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790736, Length=336, Percent_Identity=37.5, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1787671, Length=336, Percent_Identity=37.5, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1786450, Length=336, Percent_Identity=37.5, Blast_Score=189, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 41688; Mature: 41557

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPMKTQAVDGFPSGVFDKHALVGRGRRLTVEDRVAIEAGCRVGDSARAIAQKINRHHS
CCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VVAREITRNGWKIVDEDGTEQLRYNAHNAAVSTAGRMVRPKLRKLDESPTLRGVVVDCLA
HHHHHHHCCCCEEECCCCCHHHHCCCHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHH
RRWSPGRISAWLEHAFSDDESMRISHEAIYSALYIQGKGSLRAELEEVMKTKDVLIRGGS
HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHEEECCC
TRKRRARNAGVLTGRPWIKGAEITHRSPEADDRAIPGHWEGDLVIGKGGKSALITLVERT
HHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHC
SRYTLLGHLPDEHSSHTVVATLQDMVKDLNTEQLKTITWDQGAEMAVTAQVQIKDGCQVF
CCEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHEEEEECCCCCCEEEEEEEEECCCCEEE
FCEPHSPWQRPTNENTNGEIRRRFYKKGTDFATVTPEHVAWVQNELNETPRQILGGATPR
EECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCHHHHHCCCCHH
EILNELFKRGASTA
HHHHHHHHCCCCCC
>Mature Secondary Structure 
PAPMKTQAVDGFPSGVFDKHALVGRGRRLTVEDRVAIEAGCRVGDSARAIAQKINRHHS
CCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VVAREITRNGWKIVDEDGTEQLRYNAHNAAVSTAGRMVRPKLRKLDESPTLRGVVVDCLA
HHHHHHHCCCCEEECCCCCHHHHCCCHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHH
RRWSPGRISAWLEHAFSDDESMRISHEAIYSALYIQGKGSLRAELEEVMKTKDVLIRGGS
HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHEEECCC
TRKRRARNAGVLTGRPWIKGAEITHRSPEADDRAIPGHWEGDLVIGKGGKSALITLVERT
HHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHC
SRYTLLGHLPDEHSSHTVVATLQDMVKDLNTEQLKTITWDQGAEMAVTAQVQIKDGCQVF
CCEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHEEEEECCCCCCEEEEEEEEECCCCEEE
FCEPHSPWQRPTNENTNGEIRRRFYKKGTDFATVTPEHVAWVQNELNETPRQILGGATPR
EECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCHHHHHCCCCHH
EILNELFKRGASTA
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]