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The map label for this gene is ycaC [H]

Identifier: 66768262

GI number: 66768262

Start: 2344365

End: 2345021

Strand: Direct

Name: ycaC [H]

Synonym: XC_1941

Alternate gene names: 66768262

Gene position: 2344365-2345021 (Clockwise)

Preceding gene: 77761178

Following gene: 66768263

Centisome position: 45.53

GC content: 65.3

Gene sequence:

>657_bases
ATGACCACCGCCACCGCCGTCCCCGGCAAGTCCCTGCTGTCGCCGAACGACCACGCCCTGATCCTGATCGACCACCAGTC
GCAGATGGCGTTTGCCACCCACACCATCGACATCTCGGCCCTGCGCAACCACGTGGCGCTGATCGGCAAGGCCGCCAAGG
GCTTCCAGGTGCCGGTGGTGCTCACCACGGTGGCGGAGAAGTCGTTCTCCGGCCCGCTGTTTCCAGAGCTGCCGGAGATC
TTCGCCGGCGAGCCGGTGTTCGACCGCACCAGCATGAATGCCTGGGAAGACCAGGGCGTGATCGACCGCATCAACGCGAT
CGGCAAGCGCCGCCTGGTGATCGCCGGTTTGTGGACCAGCGTGTGCATCGTCGGGCCGACGCTGTCGGCGATCGAACAGG
GCTTTGATGTGTACGTGATCACCGATGCCTGCGGCGATGTCAGCGATGAGGCCCACGAGCGCGCCATTGCTCGCATGGTG
CAGGCCGGCGCAGCACCGATCACCAGCGTGCAGTACCTGCTGGAACTGCAGCGCGATTGGGCGCGCAGCGACACCTACGA
CCTCACCACCGGCATCGCACGTGCGCATGCAGGCGGCTACGGCATCGGTATTCAATACGCCAAGACCATGTTCGGCGCGC
AGGAAGGCGGACATTGA

Upstream 100 bases:

>100_bases
GCTTTGCCGCGCAGACCGTCTGCACTACCGCACACAGCACGCCGGCCAGTGCGCCGCGGGCTGCCACGTCTTCCTTCTCA
CCACTCCTGGAGCACCACCG

Downstream 100 bases:

>100_bases
ACAGCCACGCACCGGCACGCTCGCCGGGCCTGGACGCGGCGCTGTTGATGCTGCGGCTGGCTGGCGGTGGCTTTCTGCTG
CCGCATGGCCTGGGCAAGTT

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTTATAVPGKSLLSPNDHALILIDHQSQMAFATHTIDISALRNHVALIGKAAKGFQVPVVLTTVAEKSFSGPLFPELPEI
FAGEPVFDRTSMNAWEDQGVIDRINAIGKRRLVIAGLWTSVCIVGPTLSAIEQGFDVYVITDACGDVSDEAHERAIARMV
QAGAAPITSVQYLLELQRDWARSDTYDLTTGIARAHAGGYGIGIQYAKTMFGAQEGGH

Sequences:

>Translated_218_residues
MTTATAVPGKSLLSPNDHALILIDHQSQMAFATHTIDISALRNHVALIGKAAKGFQVPVVLTTVAEKSFSGPLFPELPEI
FAGEPVFDRTSMNAWEDQGVIDRINAIGKRRLVIAGLWTSVCIVGPTLSAIEQGFDVYVITDACGDVSDEAHERAIARMV
QAGAAPITSVQYLLELQRDWARSDTYDLTTGIARAHAGGYGIGIQYAKTMFGAQEGGH
>Mature_217_residues
TTATAVPGKSLLSPNDHALILIDHQSQMAFATHTIDISALRNHVALIGKAAKGFQVPVVLTTVAEKSFSGPLFPELPEIF
AGEPVFDRTSMNAWEDQGVIDRINAIGKRRLVIAGLWTSVCIVGPTLSAIEQGFDVYVITDACGDVSDEAHERAIARMVQ
AGAAPITSVQYLLELQRDWARSDTYDLTTGIARAHAGGYGIGIQYAKTMFGAQEGGH

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=179, Percent_Identity=40.7821229050279, Blast_Score=135, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23350; Mature: 23219

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTATAVPGKSLLSPNDHALILIDHQSQMAFATHTIDISALRNHVALIGKAAKGFQVPVV
CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHEEEHHHHHHHHHHHCCCCCCCCCCEE
LTTVAEKSFSGPLFPELPEIFAGEPVFDRTSMNAWEDQGVIDRINAIGKRRLVIAGLWTS
EEEEHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEHHHH
VCIVGPTLSAIEQGFDVYVITDACGDVSDEAHERAIARMVQAGAAPITSVQYLLELQRDW
HHHHCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ARSDTYDLTTGIARAHAGGYGIGIQYAKTMFGAQEGGH
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTATAVPGKSLLSPNDHALILIDHQSQMAFATHTIDISALRNHVALIGKAAKGFQVPVV
CCCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHEEEHHHHHHHHHHHCCCCCCCCCCEE
LTTVAEKSFSGPLFPELPEIFAGEPVFDRTSMNAWEDQGVIDRINAIGKRRLVIAGLWTS
EEEEHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEHHHH
VCIVGPTLSAIEQGFDVYVITDACGDVSDEAHERAIARMVQAGAAPITSVQYLLELQRDW
HHHHCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ARSDTYDLTTGIARAHAGGYGIGIQYAKTMFGAQEGGH
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]