| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is cocE [H]
Identifier: 66768202
GI number: 66768202
Start: 2275170
End: 2277083
Strand: Direct
Name: cocE [H]
Synonym: XC_1881
Alternate gene names: 66768202
Gene position: 2275170-2277083 (Clockwise)
Preceding gene: 66768201
Following gene: 66768207
Centisome position: 44.19
GC content: 65.46
Gene sequence:
>1914_bases ATGCGTCGTCTTGCCGCCTGCCTGCTCGCTACCGCCGTTGCCGCCGCCACCAGCGCGGCGCTGGCGCAGACCTCGCCGAT GACCCCGGACATCACCGGCAAGCCGTTCGTGGCAGGCGACGCCGCCAACGACTACGTCAAGCGCGAGGTGATGATCCCCA TGCGCGACGGGGTCAAGCTGCATACGGTGATCGTGTTGCCCAAGGGCGCGCGCAATGCGCCAATCGTACTCACGCGCACG CCGTACGACGCCAGCGGCCGCACCGAGCGTCTGGCCTCGCCGCATATGAAGGACCTGTTGTCTGCAGGCGATGACGTGTT CGTGGAAGGCGGTTATATCCGCGTGTTCCAGGATGTGCGCGGCAAGTACGGCTCGGAAGGCGATTACGTGATGACCCGGC CGTTGCGCGGGCCGCTTAATCCCAGCGAGGTCGACCATGCCACCGATGCGTGGGACACCATCGATTGGCTGGTCAAGAAC GTCAAGGAATCCAACGGCAAGGTCGGCATGATCGGCTCGTCCTACGAAGGTTTCACCGTGGTGATGGCGCTGACCAATCC GCATCCCGCATTGAAGGTGGCCGCGCCGGAGAGCCCGATGATCGATGGCTGGATGGGCGACGACTGGTTCAATTACGGTG CGTTCCGCCAGGTCAATTTCGACTACTTCACCGGCCAGCTCAGCAAGCGCGGCAAGGGCGCCGGCATCCCGCGTCAGGGG CACGACGATTACAGCAATTTCCTGCAGGCCGGCTCGGCCGGCGACTTCGCCAAGGCCGCCGGCCTGGAGCAACTGCCGTG GTGGCACAAGCTCACCGAACACGCCGCCTACGACAGTTTCTGGCAGGAGCAGGCGCTGGACAAGGTGATGGCACGCACGC CGTTGAAAGTGCCGACCATGTGGTTGCAGGGCCTGTGGGACCAGGAGGATATGTGGGGCGCCATCCACAGTTACGCGGCG ATGGAGCCGCGCGACAAGAGCAACAAGCTCAACTATCTGGTGATGGGGCCGTGGCGGCACAGCCAGGTCAATAGCGACGC CAGTTCACTGGGTGCACTGAATTTCGACGGCGATACCGCACGCCAGTTCCGTCGCGATGTGCTGCGCCCGTTCTTCGACC AGTACCTGGTCGATGGCGCGCCGAAAGCCGCCACGCCGCCCGTGTTCATCTACAACACCGGCGAGAACCATTGGGACCGC CTGCAGGCCTGGCCACGCAGCTGCGACAAGGGCTGCGCCGCCAAGAGCAAGCCGCTGTATCTGCAGGCGGGCGGCAAGCT GTCGTTCCAGGCGCCAACGGCTGCGCAACCGGCGTTCGAGGAATACGTGTCCGACCCGGCCAAGCCGGTGCCGTTCGTGC CACGCCCGGTCGACTTCGGCGACCGCAGCATGTGGACCACCTGGCTGGTGCACGACCAGCGCTTCGTCGATGGCCGCCCG GACGTCCTCACCTTCGTCACCGAGCCGCTGACCGCACCGCTGCAGATCGCCGGCGCGCCGGATGTGCATCTGCAGGCGTC CACCAGCGGCAGCGACAGCGATTGGGTGGTCAAGCTGATCGATGTCTACCCGGACGAGATGGCGGCCGACCCGAAGATGG GCGGCTACGAGCTGCCGGTGTCGATGGCGATCTTCCGCGGCCGCTACCGCGAAAGTTTCAGCACGCCCGCGCCGCTGGCA GCCAACCAGCCGCTGGCATTCCAGTTCGGCCTGCCCACTGCCAATCACACCTTCCAGCCGGGCCACCGGGTGATGGTGCA GGTGCAGTCCAGCCTGTTCCCGCTGTACGACCGCAACCCGCAGACCTACGTGCCCAATGTCTTCTTCGCCAAGCCCGGCG ATTATCAGAAGGCGACCCAGCGCGTGTACGTGGCGCCGGGGCAGGGCAGCTACATCAGTCTGCCGGTGCGTTGA
Upstream 100 bases:
>100_bases CCAGGCAGCCGGATCACCGCAACCACGACCTTTGACACTCCCCCCGGCGCCGCCGCGCTGCCTACAGTCGACGACTTCCC CCCAGTTTCCGGAGTCGTCG
Downstream 100 bases:
>100_bases CGCCACGGGCGCTGCGTGCCGGCGGCGCCCATACGTCTTCCAGCCACTGCGGGCGGCAGGCCACCCAGGCGGCCACCAGC TGGATCAAGATGCAGGCGGC
Product: glutaryl-7-ACA acylase precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MRRLAACLLATAVAAATSAALAQTSPMTPDITGKPFVAGDAANDYVKREVMIPMRDGVKLHTVIVLPKGARNAPIVLTRT PYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKN VKESNGKVGMIGSSYEGFTVVMALTNPHPALKVAAPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIPRQG HDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDSFWQEQALDKVMARTPLKVPTMWLQGLWDQEDMWGAIHSYAA MEPRDKSNKLNYLVMGPWRHSQVNSDASSLGALNFDGDTARQFRRDVLRPFFDQYLVDGAPKAATPPVFIYNTGENHWDR LQAWPRSCDKGCAAKSKPLYLQAGGKLSFQAPTAAQPAFEEYVSDPAKPVPFVPRPVDFGDRSMWTTWLVHDQRFVDGRP DVLTFVTEPLTAPLQIAGAPDVHLQASTSGSDSDWVVKLIDVYPDEMAADPKMGGYELPVSMAIFRGRYRESFSTPAPLA ANQPLAFQFGLPTANHTFQPGHRVMVQVQSSLFPLYDRNPQTYVPNVFFAKPGDYQKATQRVYVAPGQGSYISLPVR
Sequences:
>Translated_637_residues MRRLAACLLATAVAAATSAALAQTSPMTPDITGKPFVAGDAANDYVKREVMIPMRDGVKLHTVIVLPKGARNAPIVLTRT PYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKN VKESNGKVGMIGSSYEGFTVVMALTNPHPALKVAAPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIPRQG HDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDSFWQEQALDKVMARTPLKVPTMWLQGLWDQEDMWGAIHSYAA MEPRDKSNKLNYLVMGPWRHSQVNSDASSLGALNFDGDTARQFRRDVLRPFFDQYLVDGAPKAATPPVFIYNTGENHWDR LQAWPRSCDKGCAAKSKPLYLQAGGKLSFQAPTAAQPAFEEYVSDPAKPVPFVPRPVDFGDRSMWTTWLVHDQRFVDGRP DVLTFVTEPLTAPLQIAGAPDVHLQASTSGSDSDWVVKLIDVYPDEMAADPKMGGYELPVSMAIFRGRYRESFSTPAPLA ANQPLAFQFGLPTANHTFQPGHRVMVQVQSSLFPLYDRNPQTYVPNVFFAKPGDYQKATQRVYVAPGQGSYISLPVR >Mature_637_residues MRRLAACLLATAVAAATSAALAQTSPMTPDITGKPFVAGDAANDYVKREVMIPMRDGVKLHTVIVLPKGARNAPIVLTRT PYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKN VKESNGKVGMIGSSYEGFTVVMALTNPHPALKVAAPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIPRQG HDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDSFWQEQALDKVMARTPLKVPTMWLQGLWDQEDMWGAIHSYAA MEPRDKSNKLNYLVMGPWRHSQVNSDASSLGALNFDGDTARQFRRDVLRPFFDQYLVDGAPKAATPPVFIYNTGENHWDR LQAWPRSCDKGCAAKSKPLYLQAGGKLSFQAPTAAQPAFEEYVSDPAKPVPFVPRPVDFGDRSMWTTWLVHDQRFVDGRP DVLTFVTEPLTAPLQIAGAPDVHLQASTSGSDSDWVVKLIDVYPDEMAADPKMGGYELPVSMAIFRGRYRESFSTPAPLA ANQPLAFQFGLPTANHTFQPGHRVMVQVQSSLFPLYDRNPQTYVPNVFFAKPGDYQKATQRVYVAPGQGSYISLPVR
Specific function: Hydrolyzes cocaine to benzoate and ecgonine methyl ester, endowing the bacteria with the ability to utilize cocaine as a sole source of carbon and energy for growth, as this bacterium lives in the rhizosphere of coca plants [H]
COG id: COG2936
COG function: function code R; Predicted acyl esterases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha/beta hydrolase family. Carboxylesterase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005674 - InterPro: IPR008979 - InterPro: IPR013736 - InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15; PF08530 PepX_C [H]
EC number: NA
Molecular weight: Translated: 70467; Mature: 70467
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00306 CASEIN_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLAACLLATAVAAATSAALAQTSPMTPDITGKPFVAGDAANDYVKREVMIPMRDGVKL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHEEEEEECCCCCEE HTVIVLPKGARNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVR EEEEEECCCCCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHCCCCEEEECCEEEEEHHHH GKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVKESNGKVGMIGSSYEGFTV CCCCCCCCEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEE VMALTNPHPALKVAAPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIPRQG EEEEECCCCCEEEECCCCCCCCCCCCCCHHCCCCEEEECCHHEECHHHCCCCCCCCCCCC HDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDSFWQEQALDKVMARTPLKVPTM CHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH WLQGLWDQEDMWGAIHSYAAMEPRDKSNKLNYLVMGPWRHSQVNSDASSLGALNFDGDTA HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCEECCCCHHH RQFRRDVLRPFFDQYLVDGAPKAATPPVFIYNTGENHWDRLQAWPRSCDKGCAAKSKPLY HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEE LQAGGKLSFQAPTAAQPAFEEYVSDPAKPVPFVPRPVDFGDRSMWTTWLVHDQRFVDGRP EEECCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC DVLTFVTEPLTAPLQIAGAPDVHLQASTSGSDSDWVVKLIDVYPDEMAADPKMGGYELPV CEEEEECCCCCCCEEECCCCCEEEEECCCCCCCCEEEEEEECCCHHHCCCCCCCCEECCH SMAIFRGRYRESFSTPAPLAANQPLAFQFGLPTANHTFQPGHRVMVQVQSSLFPLYDRNP HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHCCCCCCCCC QTYVPNVFFAKPGDYQKATQRVYVAPGQGSYISLPVR CCCCCEEEEECCCCHHHHCCEEEEECCCCCEEEECCC >Mature Secondary Structure MRRLAACLLATAVAAATSAALAQTSPMTPDITGKPFVAGDAANDYVKREVMIPMRDGVKL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHEEEEEECCCCCEE HTVIVLPKGARNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVR EEEEEECCCCCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHCCCCEEEECCEEEEEHHHH GKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVKESNGKVGMIGSSYEGFTV CCCCCCCCEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEE VMALTNPHPALKVAAPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIPRQG EEEEECCCCCEEEECCCCCCCCCCCCCCHHCCCCEEEECCHHEECHHHCCCCCCCCCCCC HDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDSFWQEQALDKVMARTPLKVPTM CHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH WLQGLWDQEDMWGAIHSYAAMEPRDKSNKLNYLVMGPWRHSQVNSDASSLGALNFDGDTA HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCEECCCCHHH RQFRRDVLRPFFDQYLVDGAPKAATPPVFIYNTGENHWDRLQAWPRSCDKGCAAKSKPLY HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEE LQAGGKLSFQAPTAAQPAFEEYVSDPAKPVPFVPRPVDFGDRSMWTTWLVHDQRFVDGRP EEECCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC DVLTFVTEPLTAPLQIAGAPDVHLQASTSGSDSDWVVKLIDVYPDEMAADPKMGGYELPV CEEEEECCCCCCCEEECCCCCEEEEECCCCCCCCEEEEEEECCCHHHCCCCCCCCEECCH SMAIFRGRYRESFSTPAPLAANQPLAFQFGLPTANHTFQPGHRVMVQVQSSLFPLYDRNP HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHCCCCCCCCC QTYVPNVFFAKPGDYQKATQRVYVAPGQGSYISLPVR CCCCCEEEEECCCCHHHHCCEEEEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10698749; 11742345; 12369817 [H]