Definition Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome.
Accession NC_007086
Length 5,148,708

Click here to switch to the map view.

The map label for this gene is yjeE [H]

Identifier: 66768136

GI number: 66768136

Start: 2207070

End: 2207570

Strand: Direct

Name: yjeE [H]

Synonym: XC_1815

Alternate gene names: 66768136

Gene position: 2207070-2207570 (Clockwise)

Preceding gene: 66768135

Following gene: 66768137

Centisome position: 42.87

GC content: 69.46

Gene sequence:

>501_bases
ATGACCACGCTGCACGCCTTTCTGGCCGACGTCGATGCCACCGAGCAGGTCGGGCAGGCCCTGGCGGCCACCCGGCCCGC
CACCGCCGTGGTGCAGTTGCACGGCGACCTGGGCGCCGGCAAATCCACCCTGGCGCGTGCGTTGTTGCGTGCGCTCGGCG
TCACCGGCCCCATTCGCAGCCCCACCTACACGCTTGTGGAACGGTATCCACTGACTGCCGGTGGCGAAGCCTGGCATCTG
GATCTGTACCGCATCGGCCACGCGGGGGAGCTGGATTTTCTCGGACTGGACGAGGGCAGTGCCACCCTGTGGCTGGTCGA
ATGGCCGGAGCGCGGGGCTGGCGCTTTGCCGGCGGCGGATCTGGAGGTCGAATTGGCAGTGGCCGGGGAGGGACGCGCGC
TGACCCTGCGCGGCGCGAGCCCAAGCGGGCAGGCATGGGTGAACGAGCTGGCAGCGCGGGACGAGTTGCGGGCGCTTTTT
GCCGCCGAACAAGAGGAATGA

Upstream 100 bases:

>100_bases
CCTGCGCCGGCGATGCCGCCGCCGCCGACGGCGAGCGCGGCCTGCTTCCCACCGACCTGCTGCCGGCGCTTCGCCGTCTC
GCCAATGCTGGAGCCATTGC

Downstream 100 bases:

>100_bases
ACGCCAGGTTATGGATTATTAAGGGAAATTGCCTTGCAATTCGTGCGTTCGGGTGATTGAATCCGGCTCCATGACCCAGG
GGAGCCACCATCGCTTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTTLHAFLADVDATEQVGQALAATRPATAVVQLHGDLGAGKSTLARALLRALGVTGPIRSPTYTLVERYPLTAGGEAWHL
DLYRIGHAGELDFLGLDEGSATLWLVEWPERGAGALPAADLEVELAVAGEGRALTLRGASPSGQAWVNELAARDELRALF
AAEQEE

Sequences:

>Translated_166_residues
MTTLHAFLADVDATEQVGQALAATRPATAVVQLHGDLGAGKSTLARALLRALGVTGPIRSPTYTLVERYPLTAGGEAWHL
DLYRIGHAGELDFLGLDEGSATLWLVEWPERGAGALPAADLEVELAVAGEGRALTLRGASPSGQAWVNELAARDELRALF
AAEQEE
>Mature_165_residues
TTLHAFLADVDATEQVGQALAATRPATAVVQLHGDLGAGKSTLARALLRALGVTGPIRSPTYTLVERYPLTAGGEAWHLD
LYRIGHAGELDFLGLDEGSATLWLVEWPERGAGALPAADLEVELAVAGEGRALTLRGASPSGQAWVNELAARDELRALFA
AEQEE

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=146, Percent_Identity=40.4109589041096, Blast_Score=108, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17480; Mature: 17349

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS00399 SUCCINYL_COA_LIG_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLHAFLADVDATEQVGQALAATRPATAVVQLHGDLGAGKSTLARALLRALGVTGPIRS
CCHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC
PTYTLVERYPLTAGGEAWHLDLYRIGHAGELDFLGLDEGSATLWLVEWPERGAGALPAAD
CCEEEHCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCC
LEVELAVAGEGRALTLRGASPSGQAWVNELAARDELRALFAAEQEE
EEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTLHAFLADVDATEQVGQALAATRPATAVVQLHGDLGAGKSTLARALLRALGVTGPIRS
CHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC
PTYTLVERYPLTAGGEAWHLDLYRIGHAGELDFLGLDEGSATLWLVEWPERGAGALPAAD
CCEEEHCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCC
LEVELAVAGEGRALTLRGASPSGQAWVNELAARDELRALFAAEQEE
EEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]