| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yjeE [H]
Identifier: 66768136
GI number: 66768136
Start: 2207070
End: 2207570
Strand: Direct
Name: yjeE [H]
Synonym: XC_1815
Alternate gene names: 66768136
Gene position: 2207070-2207570 (Clockwise)
Preceding gene: 66768135
Following gene: 66768137
Centisome position: 42.87
GC content: 69.46
Gene sequence:
>501_bases ATGACCACGCTGCACGCCTTTCTGGCCGACGTCGATGCCACCGAGCAGGTCGGGCAGGCCCTGGCGGCCACCCGGCCCGC CACCGCCGTGGTGCAGTTGCACGGCGACCTGGGCGCCGGCAAATCCACCCTGGCGCGTGCGTTGTTGCGTGCGCTCGGCG TCACCGGCCCCATTCGCAGCCCCACCTACACGCTTGTGGAACGGTATCCACTGACTGCCGGTGGCGAAGCCTGGCATCTG GATCTGTACCGCATCGGCCACGCGGGGGAGCTGGATTTTCTCGGACTGGACGAGGGCAGTGCCACCCTGTGGCTGGTCGA ATGGCCGGAGCGCGGGGCTGGCGCTTTGCCGGCGGCGGATCTGGAGGTCGAATTGGCAGTGGCCGGGGAGGGACGCGCGC TGACCCTGCGCGGCGCGAGCCCAAGCGGGCAGGCATGGGTGAACGAGCTGGCAGCGCGGGACGAGTTGCGGGCGCTTTTT GCCGCCGAACAAGAGGAATGA
Upstream 100 bases:
>100_bases CCTGCGCCGGCGATGCCGCCGCCGCCGACGGCGAGCGCGGCCTGCTTCCCACCGACCTGCTGCCGGCGCTTCGCCGTCTC GCCAATGCTGGAGCCATTGC
Downstream 100 bases:
>100_bases ACGCCAGGTTATGGATTATTAAGGGAAATTGCCTTGCAATTCGTGCGTTCGGGTGATTGAATCCGGCTCCATGACCCAGG GGAGCCACCATCGCTTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTTLHAFLADVDATEQVGQALAATRPATAVVQLHGDLGAGKSTLARALLRALGVTGPIRSPTYTLVERYPLTAGGEAWHL DLYRIGHAGELDFLGLDEGSATLWLVEWPERGAGALPAADLEVELAVAGEGRALTLRGASPSGQAWVNELAARDELRALF AAEQEE
Sequences:
>Translated_166_residues MTTLHAFLADVDATEQVGQALAATRPATAVVQLHGDLGAGKSTLARALLRALGVTGPIRSPTYTLVERYPLTAGGEAWHL DLYRIGHAGELDFLGLDEGSATLWLVEWPERGAGALPAADLEVELAVAGEGRALTLRGASPSGQAWVNELAARDELRALF AAEQEE >Mature_165_residues TTLHAFLADVDATEQVGQALAATRPATAVVQLHGDLGAGKSTLARALLRALGVTGPIRSPTYTLVERYPLTAGGEAWHLD LYRIGHAGELDFLGLDEGSATLWLVEWPERGAGALPAADLEVELAVAGEGRALTLRGASPSGQAWVNELAARDELRALFA AEQEE
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=146, Percent_Identity=40.4109589041096, Blast_Score=108, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 17480; Mature: 17349
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00399 SUCCINYL_COA_LIG_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLHAFLADVDATEQVGQALAATRPATAVVQLHGDLGAGKSTLARALLRALGVTGPIRS CCHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC PTYTLVERYPLTAGGEAWHLDLYRIGHAGELDFLGLDEGSATLWLVEWPERGAGALPAAD CCEEEHCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCC LEVELAVAGEGRALTLRGASPSGQAWVNELAARDELRALFAAEQEE EEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTLHAFLADVDATEQVGQALAATRPATAVVQLHGDLGAGKSTLARALLRALGVTGPIRS CHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC PTYTLVERYPLTAGGEAWHLDLYRIGHAGELDFLGLDEGSATLWLVEWPERGAGALPAAD CCEEEHCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCC LEVELAVAGEGRALTLRGASPSGQAWVNELAARDELRALFAAEQEE EEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]