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The map label for this gene is ybjS [H]

Identifier: 66767998

GI number: 66767998

Start: 2011552

End: 2012511

Strand: Direct

Name: ybjS [H]

Synonym: XC_1674

Alternate gene names: 66767998

Gene position: 2011552-2012511 (Clockwise)

Preceding gene: 66767997

Following gene: 66767999

Centisome position: 39.07

GC content: 65.52

Gene sequence:

>960_bases
ATGAGCCTGCGTATTCTTGTCACCGGCGCATCGGGCTTTGTGGGCGGCGCCTTTCTGCGGCGCTTTCAGGGCCAGCCAGG
GTTGGACATCCACGGCATCGGCCGCCGCGCCTGCGCGTTGCCCAACTACCATCGCATCGACCTGAGCCAGCCGTTTACGC
TCGACTGGCAGCCGGATGTGGTGATTCATGCGGCGGCACTGGCGTCTCCCTGGGGCACCCGCGCGCAATTCGAGCTGCAC
AATGTGCAGGCCACCGCGAATGTCATCGACTTCTGCACTCGCAACGGCAATCCGCGTCTGCTGTACGTGTCATCGAGCTC
GGTGTTCTACCGCGAAGAACATCAGTACGGGCTCAGCGAAGACAGCCCGATCGGGCCGCGCTTCGTCAACACCTACGCGC
AGACCAAATACCTCGGCGAGACGCTGCTGGATGGGTACGCGGGCGAGAAGAGCATCCTGCGTCCGCGCGCGGTATTTGGC
CCCGGCGACACCGTGCTGTTTCCGCGTGTGATTGCTGCCGCACGCAAAGGAGCGTTGCCGCGCTTCGTTGGCCAGAGCCA
GCCGGTGATCGGCGATCTGATCTACATCGATGCGCTCTGCGACTACCTGTACCGCGCCGCCGTCGCGCCGCAACTGCAAC
CGTCCTACAACCTCACCAATGCGCAGCCGGTCGATCTGCAGCAGCTGCTGCTGGATGTTCTGGCGCGCCTGCAGTTGCCG
TTGCCGCAGCGGCAGGTGCGCATCGGCACGGCGTTGCGGATGGCCAGTGTGGTGGAGGGCGCCTGCCGGTTGCTGCGCTT
GCGTGGCGAGCCGCCGATCACGCGCTTCGGCGTGGGTGTGTTTGCGTACTCCAAGACCTTCGACCCGCGCCGCACGCTGG
CCGACCTGGGCACGCCCAGCGTTGGCCTGGACGAAGGCATCGACGCCTTCGTGCGTTGGCAGGCAGCGCAGTGGGTGTAA

Upstream 100 bases:

>100_bases
CCGTGCGCGTGCTGCATGGCTTGGTGCAGGCGCATCCGGAGCTGGCGATCCTGCCATCGCATTGCCAGCCCAGTCTGGAC
CGTTATCAACCGGAGTGGCG

Downstream 100 bases:

>100_bases
TTACGCTGCTGCTGGCGTTGGCCTATCTCGCCATGCTGATGCTGCGTGCGCTGGGCGCGTTGTGGATTGTGCAGCGCCGC
GCCGCAGTGCAGGTGCCAGC

Product: NAD(P)H steroid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSLRILVTGASGFVGGAFLRRFQGQPGLDIHGIGRRACALPNYHRIDLSQPFTLDWQPDVVIHAAALASPWGTRAQFELH
NVQATANVIDFCTRNGNPRLLYVSSSSVFYREEHQYGLSEDSPIGPRFVNTYAQTKYLGETLLDGYAGEKSILRPRAVFG
PGDTVLFPRVIAAARKGALPRFVGQSQPVIGDLIYIDALCDYLYRAAVAPQLQPSYNLTNAQPVDLQQLLLDVLARLQLP
LPQRQVRIGTALRMASVVEGACRLLRLRGEPPITRFGVGVFAYSKTFDPRRTLADLGTPSVGLDEGIDAFVRWQAAQWV

Sequences:

>Translated_319_residues
MSLRILVTGASGFVGGAFLRRFQGQPGLDIHGIGRRACALPNYHRIDLSQPFTLDWQPDVVIHAAALASPWGTRAQFELH
NVQATANVIDFCTRNGNPRLLYVSSSSVFYREEHQYGLSEDSPIGPRFVNTYAQTKYLGETLLDGYAGEKSILRPRAVFG
PGDTVLFPRVIAAARKGALPRFVGQSQPVIGDLIYIDALCDYLYRAAVAPQLQPSYNLTNAQPVDLQQLLLDVLARLQLP
LPQRQVRIGTALRMASVVEGACRLLRLRGEPPITRFGVGVFAYSKTFDPRRTLADLGTPSVGLDEGIDAFVRWQAAQWV
>Mature_318_residues
SLRILVTGASGFVGGAFLRRFQGQPGLDIHGIGRRACALPNYHRIDLSQPFTLDWQPDVVIHAAALASPWGTRAQFELHN
VQATANVIDFCTRNGNPRLLYVSSSSVFYREEHQYGLSEDSPIGPRFVNTYAQTKYLGETLLDGYAGEKSILRPRAVFGP
GDTVLFPRVIAAARKGALPRFVGQSQPVIGDLIYIDALCDYLYRAAVAPQLQPSYNLTNAQPVDLQQLLLDVLARLQLPL
PQRQVRIGTALRMASVVEGACRLLRLRGEPPITRFGVGVFAYSKTFDPRRTLADLGTPSVGLDEGIDAFVRWQAAQWV

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI193211614, Length=200, Percent_Identity=27, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI8393516, Length=200, Percent_Identity=27, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI87081792, Length=335, Percent_Identity=27.4626865671642, Blast_Score=104, Evalue=7e-24,
Organism=Saccharomyces cerevisiae, GI6321437, Length=355, Percent_Identity=26.4788732394366, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 35164; Mature: 35033

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRILVTGASGFVGGAFLRRFQGQPGLDIHGIGRRACALPNYHRIDLSQPFTLDWQPDV
CCEEEEEECCCCHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCEEECCCCCEEECCCCCE
VIHAAALASPWGTRAQFELHNVQATANVIDFCTRNGNPRLLYVSSSSVFYREEHQYGLSE
EEEEHHHCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEEECCCEEEEHHHCCCCCC
DSPIGPRFVNTYAQTKYLGETLLDGYAGEKSILRPRAVFGPGDTVLFPRVIAAARKGALP
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCHHHHHHHHHHHHCCCC
RFVGQSQPVIGDLIYIDALCDYLYRAAVAPQLQPSYNLTNAQPVDLQQLLLDVLARLQLP
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
LPQRQVRIGTALRMASVVEGACRLLRLRGEPPITRFGVGVFAYSKTFDPRRTLADLGTPS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCHHHHHHHCCCCC
VGLDEGIDAFVRWQAAQWV
CCCHHCHHHHHHHHHHCCC
>Mature Secondary Structure 
SLRILVTGASGFVGGAFLRRFQGQPGLDIHGIGRRACALPNYHRIDLSQPFTLDWQPDV
CEEEEEECCCCHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCEEECCCCCEEECCCCCE
VIHAAALASPWGTRAQFELHNVQATANVIDFCTRNGNPRLLYVSSSSVFYREEHQYGLSE
EEEEHHHCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEEECCCEEEEHHHCCCCCC
DSPIGPRFVNTYAQTKYLGETLLDGYAGEKSILRPRAVFGPGDTVLFPRVIAAARKGALP
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCHHHHHHHHHHHHCCCC
RFVGQSQPVIGDLIYIDALCDYLYRAAVAPQLQPSYNLTNAQPVDLQQLLLDVLARLQLP
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
LPQRQVRIGTALRMASVVEGACRLLRLRGEPPITRFGVGVFAYSKTFDPRRTLADLGTPS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCHHHHHHHCCCCC
VGLDEGIDAFVRWQAAQWV
CCCHHCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]