| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is 66767971
Identifier: 66767971
GI number: 66767971
Start: 1980530
End: 1982008
Strand: Direct
Name: 66767971
Synonym: XC_1647
Alternate gene names: NA
Gene position: 1980530-1982008 (Clockwise)
Preceding gene: 77761156
Following gene: 66767972
Centisome position: 38.47
GC content: 65.52
Gene sequence:
>1479_bases ATGAAGGCCAAGCCAACGCTGAGTTTCTGGCAGATCTGGAACATGTGCTTTGGATTCCTCGGCATCCAGTTCGGCTTTGC ACTGCAAAACGCCAATGCCAGCCGCATCTTCCAGACGCTGGGCGCGCAGGTCGACGATGTGCCCGGGCTGTGGATTGCCG CGCCGCTGACCGGGCTGATCGTGCAGCCCATCATCGGCTATCTCTCCGACCGCACCTGGACCGGCTGGGGCCGCCGCCGG CCGTACTTCATGATCGGTGCGGTGTTCACCACGCTGGCGTTGCTGGTGATGCCCAACGCGCCGGTGCTGTGGATCGCAGC CGGCACGCTGTGGGTACTGGACGCGTCCATCAACATTTCGATGGAGCCATTCCGCGCCTTGGTCGGTGACCAGCTGCCGG CCGAGCAACGCCCCAGCGGCTACGCGATGCAGAGCTTTTTCATTGGCGTCGGCGCGATTGTGGCGAGCTTTCTGCCCTGG CTGCTGACGCGCTGGGGCGTAGACAACACTGCACCTGCCGGCGAGCTGCCCGATAGCGTGCGCTACGCGTTCTACCTAGG TGCGGCGGTGTTGTTCCTGTCGATCAGCTGGACGGTGCTGCGCACGCGCGAATACAGCCCGGCCGAGCTGGCGGCGTTTG AACCGGCGCCGGCACCGGCTGCCGCGCAACTGGCCGCCACCGATCAACCCAGCCTGCAGGCCAGCGTGCTGTGGTGTCTG GGCGGGTTGCTGCTGGCCGCTGCCATCGCCTGGCAGCACGGCGATCGCATGTTGTACGTGCTGGCGGGCCTGTGCATCGC CTATGGCGTGCTGCTGGCGTTGGCGCGCGTGCTGCCGCGTGGCGGCATGCTGGTCGCAATCATGCACGATCTGCGCCACA TGCCGCAGACGATGCGGCGCCTGGCCTGGGTGCAGTTCTTTTCGTGGTTTGCGCTGTTTGCGATGTGGATCTACACCACC GCGGCAGTGCCGCAGGTGCATTTCGGCGCACGCGATACCGTCTCGGCCGCCTACAACGACGGGGCGAACTGGGTGGGTGT GTTGTTCGGCGCCTACAACGGCTTTGCCGCGCTCGCCGCCACCGTCATCCCGCTGATGGTGCGTGCGATCGGGCTGCGCT GGAGCCACCTGTGCAACCTGTGGCTGGGTGCGGCGGGGTTGTTGTCGATGCTGTTCATCCGCGACCCGTACTGGCTGCTG CTGTCGATGCTGGGCGTCGGTTTTGCCTGGGCCTCGATCCTGTCCTTGCCCTATGCACTGCTGTCCGACAGCGTGCCCGC CGCCAAGATGGGCGTGTATATGGGCATCTTCAATTTCTTTATCGTGATTCCGCAATTGGTTGCCGCCAGCGCCCTGGGCT TCGTGCTCCGCGTGTGGCTGGGCGGGCAACCGATCTACGCGCTGGCGATCGGCGGCTTGAGCCTGATCGTGGCCGGTGTG TGCGTGGTGCGGGTCCCAAGCGCCCAGGGAGGGCAATGA
Upstream 100 bases:
>100_bases CCGCGTACAACGGCGGGCGCGGCGGCGAGGATGGTGTGCGAAATCAGGCCACGGTGAGCGCCTTGTTGGTCGGGCCGGTC GCCTCAGCGGAGGCGGCGCC
Downstream 100 bases:
>100_bases TGCGCAGCGTCTTGATGGCAGCCATGCTGCTTTATTCGGGAGCAGCCTGCGCTGCGCCTGCACCCGGTGATTACTACGGC ACCCTGGAACCGTTCGCCGC
Product: transport protein
Products: NA
Alternate protein names: Sugar Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Facilitator Superfamily Protein; SugarCation Symporter; Facilitator Superfamily Transporter Permease; Cytoplasmic Membrane Maltose Transporter MalY; Transport Protein Facilitator Superfamily Protein; MFS Superfamily Sugcific Permease; Facilitator Superfamily Transmembrane Protein; Facilitator Family Transporter; Sucrose Transporter Protein
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MKAKPTLSFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLIVQPIIGYLSDRTWTGWGRRR PYFMIGAVFTTLALLVMPNAPVLWIAAGTLWVLDASINISMEPFRALVGDQLPAEQRPSGYAMQSFFIGVGAIVASFLPW LLTRWGVDNTAPAGELPDSVRYAFYLGAAVLFLSISWTVLRTREYSPAELAAFEPAPAPAAAQLAATDQPSLQASVLWCL GGLLLAAAIAWQHGDRMLYVLAGLCIAYGVLLALARVLPRGGMLVAIMHDLRHMPQTMRRLAWVQFFSWFALFAMWIYTT AAVPQVHFGARDTVSAAYNDGANWVGVLFGAYNGFAALAATVIPLMVRAIGLRWSHLCNLWLGAAGLLSMLFIRDPYWLL LSMLGVGFAWASILSLPYALLSDSVPAAKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLIVAGV CVVRVPSAQGGQ
Sequences:
>Translated_492_residues MKAKPTLSFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLIVQPIIGYLSDRTWTGWGRRR PYFMIGAVFTTLALLVMPNAPVLWIAAGTLWVLDASINISMEPFRALVGDQLPAEQRPSGYAMQSFFIGVGAIVASFLPW LLTRWGVDNTAPAGELPDSVRYAFYLGAAVLFLSISWTVLRTREYSPAELAAFEPAPAPAAAQLAATDQPSLQASVLWCL GGLLLAAAIAWQHGDRMLYVLAGLCIAYGVLLALARVLPRGGMLVAIMHDLRHMPQTMRRLAWVQFFSWFALFAMWIYTT AAVPQVHFGARDTVSAAYNDGANWVGVLFGAYNGFAALAATVIPLMVRAIGLRWSHLCNLWLGAAGLLSMLFIRDPYWLL LSMLGVGFAWASILSLPYALLSDSVPAAKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLIVAGV CVVRVPSAQGGQ >Mature_492_residues MKAKPTLSFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLIVQPIIGYLSDRTWTGWGRRR PYFMIGAVFTTLALLVMPNAPVLWIAAGTLWVLDASINISMEPFRALVGDQLPAEQRPSGYAMQSFFIGVGAIVASFLPW LLTRWGVDNTAPAGELPDSVRYAFYLGAAVLFLSISWTVLRTREYSPAELAAFEPAPAPAAAQLAATDQPSLQASVLWCL GGLLLAAAIAWQHGDRMLYVLAGLCIAYGVLLALARVLPRGGMLVAIMHDLRHMPQTMRRLAWVQFFSWFALFAMWIYTT AAVPQVHFGARDTVSAAYNDGANWVGVLFGAYNGFAALAATVIPLMVRAIGLRWSHLCNLWLGAAGLLSMLFIRDPYWLL LSMLGVGFAWASILSLPYALLSDSVPAAKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLIVAGV CVVRVPSAQGGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53328; Mature: 53328
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKPTLSFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLI CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH VQPIIGYLSDRTWTGWGRRRPYFMIGAVFTTLALLVMPNAPVLWIAAGTLWVLDASINIS HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCC MEPFRALVGDQLPAEQRPSGYAMQSFFIGVGAIVASFLPWLLTRWGVDNTAPAGELPDSV HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH RYAFYLGAAVLFLSISWTVLRTREYSPAELAAFEPAPAPAAAQLAATDQPSLQASVLWCL HHHHHHHHHHHHHHHHHHEEECCCCCCCHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHH GGLLLAAAIAWQHGDRMLYVLAGLCIAYGVLLALARVLPRGGMLVAIMHDLRHMPQTMRR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LAWVQFFSWFALFAMWIYTTAAVPQVHFGARDTVSAAYNDGANWVGVLFGAYNGFAALAA HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TVIPLMVRAIGLRWSHLCNLWLGAAGLLSMLFIRDPYWLLLSMLGVGFAWASILSLPYAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSDSVPAAKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLIVAGV HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH CVVRVPSAQGGQ HHEECCCCCCCC >Mature Secondary Structure MKAKPTLSFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLI CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH VQPIIGYLSDRTWTGWGRRRPYFMIGAVFTTLALLVMPNAPVLWIAAGTLWVLDASINIS HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCC MEPFRALVGDQLPAEQRPSGYAMQSFFIGVGAIVASFLPWLLTRWGVDNTAPAGELPDSV HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH RYAFYLGAAVLFLSISWTVLRTREYSPAELAAFEPAPAPAAAQLAATDQPSLQASVLWCL HHHHHHHHHHHHHHHHHHEEECCCCCCCHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHH GGLLLAAAIAWQHGDRMLYVLAGLCIAYGVLLALARVLPRGGMLVAIMHDLRHMPQTMRR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LAWVQFFSWFALFAMWIYTTAAVPQVHFGARDTVSAAYNDGANWVGVLFGAYNGFAALAA HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TVIPLMVRAIGLRWSHLCNLWLGAAGLLSMLFIRDPYWLLLSMLGVGFAWASILSLPYAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSDSVPAAKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLIVAGV HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH CVVRVPSAQGGQ HHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA