| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66767947
Identifier: 66767947
GI number: 66767947
Start: 1946484
End: 1947638
Strand: Direct
Name: 66767947
Synonym: XC_1623
Alternate gene names: NA
Gene position: 1946484-1947638 (Clockwise)
Preceding gene: 66767946
Following gene: 66767948
Centisome position: 37.81
GC content: 57.14
Gene sequence:
>1155_bases ATGACCGCACGTACCAGGGCGGCGGGTTTGTCGCTTATTGAAATGATGATTGCGCTGGTCATTGGCCTTGTGCTGCTGCT TGGGGTGATCCAGGTATTTTCCGCGTCGAGGACAGCATTTCAGCTGTCTGAAGGAGCGTCCAGAGCCCAAGAAAATGCTC GGTTTGCCCTGGATTTCCTGGCGCGTGATATCCGTATGGCGGGTCATTTCGGTTGCGTCAACGACCAGGCGCATTTTGTG AAAGGCCAGGGGGATCCCCGCGTCAACTTGTCTACGACAACCGGAAGTGGCAGCCCACTGGATTTTTCTGTATCGATTCA AGGGTATGAAGCTACAGGTACATCGCCAGGAGCGCAGCTGCGGCTCGGCGGAACGTTGTCCCCCGCCGCCGGTGTGCCTT CGCAGATTCAAGGGCTCAATCCTGCTCCGTTGCCAGGCAGCGATATTCTTGTACTACGTTTTCTTTCCCCTGAAGGTGTG CCAGTTACTGGGCTGGTACGTACAGGCAGCAACTCCATTGCCAGCTTTGATGCAGGGCGATTGTCACGTTTAACCAGCGG AGGCGTTGGAACCCCCACCTTATTCGGCATCGCCGACTGCTCGCATGCAGACGTGTTTACCGGGACATCTGCTGCGAGTT CTGTAACGACGAGCGTAGATCTGTCGCGCTATACCGCACAGCCGACGGGGCAAACAATGCTCTATCGTGCTGAATCACTG GTGTACTACGTCGGCACCGGAGCCTCCGGTGAGCCTGCACTGCGTCGAGCACGCGCGGCAAGCGATGGCACGTACGCTCA GAACGAGGAGCTCGTCGAGGGAATTGAAAGTCTGCAGTTGCTATATGGCCTGGATTCCACAGCCATTATCTCAAGTGCCA CTCCGCCAGTGGGAAATATAACGTCTCAATTGACAGCATCAGCGGTGGGAGCCAGTGCAGATGCGGCCGGCGCCAACCAG TGGCGACGGGTTGGGGCGGTCCAGGTAGGAATTCTGGCACGCAGTCCCAATACGGCGAACGCAGTTGCCACGGCTAATGA CGATCCCGTGGGTGTACTGGGAGTCAGCATGCAGCCGCCATCTGCACCTGACGGCCGCTACCGAGCCAGTTATGAACTAT CCATCGCACTTCGCAATCGCTTGTTTGGCAACTAA
Upstream 100 bases:
>100_bases TGGACAGGTCACTGTGTCCATCTCTTGGGGTGATCAGAAGTGGGACGCAACTGATCCGGATACATCGACGACATTCGCAT TGCAGACAGAGATCTGAATC
Downstream 100 bases:
>100_bases TCATGAATCCTCAGCGCACACTCGTGAATAAAGTATCTTTGTCCTCGCGTAGTCGGCAGAGGGGCGCTGTTCTGTATGTC GCCCTGATCATGTTGATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Type 4 Fimbrial Biogenesis Protein PilW; Type IV Pilin; PilW-Related Protein; Tfp Pilus Assembly Protein PilW
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTARTRAAGLSLIEMMIALVIGLVLLLGVIQVFSASRTAFQLSEGASRAQENARFALDFLARDIRMAGHFGCVNDQAHFV KGQGDPRVNLSTTTGSGSPLDFSVSIQGYEATGTSPGAQLRLGGTLSPAAGVPSQIQGLNPAPLPGSDILVLRFLSPEGV PVTGLVRTGSNSIASFDAGRLSRLTSGGVGTPTLFGIADCSHADVFTGTSAASSVTTSVDLSRYTAQPTGQTMLYRAESL VYYVGTGASGEPALRRARAASDGTYAQNEELVEGIESLQLLYGLDSTAIISSATPPVGNITSQLTASAVGASADAAGANQ WRRVGAVQVGILARSPNTANAVATANDDPVGVLGVSMQPPSAPDGRYRASYELSIALRNRLFGN
Sequences:
>Translated_384_residues MTARTRAAGLSLIEMMIALVIGLVLLLGVIQVFSASRTAFQLSEGASRAQENARFALDFLARDIRMAGHFGCVNDQAHFV KGQGDPRVNLSTTTGSGSPLDFSVSIQGYEATGTSPGAQLRLGGTLSPAAGVPSQIQGLNPAPLPGSDILVLRFLSPEGV PVTGLVRTGSNSIASFDAGRLSRLTSGGVGTPTLFGIADCSHADVFTGTSAASSVTTSVDLSRYTAQPTGQTMLYRAESL VYYVGTGASGEPALRRARAASDGTYAQNEELVEGIESLQLLYGLDSTAIISSATPPVGNITSQLTASAVGASADAAGANQ WRRVGAVQVGILARSPNTANAVATANDDPVGVLGVSMQPPSAPDGRYRASYELSIALRNRLFGN >Mature_383_residues TARTRAAGLSLIEMMIALVIGLVLLLGVIQVFSASRTAFQLSEGASRAQENARFALDFLARDIRMAGHFGCVNDQAHFVK GQGDPRVNLSTTTGSGSPLDFSVSIQGYEATGTSPGAQLRLGGTLSPAAGVPSQIQGLNPAPLPGSDILVLRFLSPEGVP VTGLVRTGSNSIASFDAGRLSRLTSGGVGTPTLFGIADCSHADVFTGTSAASSVTTSVDLSRYTAQPTGQTMLYRAESLV YYVGTGASGEPALRRARAASDGTYAQNEELVEGIESLQLLYGLDSTAIISSATPPVGNITSQLTASAVGASADAAGANQW RRVGAVQVGILARSPNTANAVATANDDPVGVLGVSMQPPSAPDGRYRASYELSIALRNRLFGN
Specific function: Unknown
COG id: COG4966
COG function: function code NU; Tfp pilus assembly protein PilW
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39480; Mature: 39349
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARTRAAGLSLIEMMIALVIGLVLLLGVIQVFSASRTAFQLSEGASRAQENARFALDFL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH ARDIRMAGHFGCVNDQAHFVKGQGDPRVNLSTTTGSGSPLDFSVSIQGYEATGTSPGAQL HHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCEE RLGGTLSPAAGVPSQIQGLNPAPLPGSDILVLRFLSPEGVPVTGLVRTGSNSIASFDAGR EECCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCEECCCHH LSRLTSGGVGTPTLFGIADCSHADVFTGTSAASSVTTSVDLSRYTAQPTGQTMLYRAESL HHHHCCCCCCCCCEEEECCCCCCCEECCCCCCCHHEEEEEHHHHCCCCCCCEEEEEECEE VYYVGTGASGEPALRRARAASDGTYAQNEELVEGIESLQLLYGLDSTAIISSATPPVGNI EEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCH TSQLTASAVGASADAAGANQWRRVGAVQVGILARSPNTANAVATANDDPVGVLGVSMQPP HHHHHHHHCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCCC SAPDGRYRASYELSIALRNRLFGN CCCCCCEEEEEEEEEEEHHHCCCC >Mature Secondary Structure TARTRAAGLSLIEMMIALVIGLVLLLGVIQVFSASRTAFQLSEGASRAQENARFALDFL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH ARDIRMAGHFGCVNDQAHFVKGQGDPRVNLSTTTGSGSPLDFSVSIQGYEATGTSPGAQL HHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCEE RLGGTLSPAAGVPSQIQGLNPAPLPGSDILVLRFLSPEGVPVTGLVRTGSNSIASFDAGR EECCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCEECCCHH LSRLTSGGVGTPTLFGIADCSHADVFTGTSAASSVTTSVDLSRYTAQPTGQTMLYRAESL HHHHCCCCCCCCCEEEECCCCCCCEECCCCCCCHHEEEEEHHHHCCCCCCCEEEEEECEE VYYVGTGASGEPALRRARAASDGTYAQNEELVEGIESLQLLYGLDSTAIISSATPPVGNI EEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCH TSQLTASAVGASADAAGANQWRRVGAVQVGILARSPNTANAVATANDDPVGVLGVSMQPP HHHHHHHHCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCCC SAPDGRYRASYELSIALRNRLFGN CCCCCCEEEEEEEEEEEHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA