| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is nuoI
Identifier: 66767921
GI number: 66767921
Start: 1916673
End: 1917164
Strand: Direct
Name: nuoI
Synonym: XC_1597
Alternate gene names: 66767921
Gene position: 1916673-1917164 (Clockwise)
Preceding gene: 162017103
Following gene: 66767922
Centisome position: 37.23
GC content: 60.16
Gene sequence:
>492_bases TTGATGAACAAGATCACCCATTACTTCAAGAGCCTGCTGCTGCTCGAACTGCTCGGAGGGCTGTGGCTGACGTTGAAATA CACGTTCAAGCCCAAGTACACCGTGCTGTATCCGATGGAGAAGTTCCCGCAGTCGCCGCGCTTCCGTGGGTTGCACGCGC TGCGTCGCTACCCCAATGGCGAAGAGCGCTGCATTGCCTGCAAGCTGTGCGAAGCGGTTTGCCCGGCACTGGCGATCACC ATCGACTCGGCCAAGCGCGAGGACGGCACCCGTCGCACCACGCGCTACGACATCGACCTGTTCAAGTGCATCTTCTGCGG CTTCTGCGAAGAAAGCTGCCCGGTGGACTCGATCGTCGAAACGCACATCCTCGAGTACCACTTCGAGAAGCGTGGCGAGA ATATTGTCAACAAGCCGCAGCTGCTGGCGATCGGAGACCGGCTTGAAGCCGAGATCGCCGAGCGTCGCGCTGCCGATGCC GCCTTCCGTTGA
Upstream 100 bases:
>100_bases CATGCGTCTGGGCTGGAAGGTGTTCATTCCGCTCACGATCGTGTGGATCGCGGTGACGGCATTGATGGTGTTTTACGGCG TGATCCAGAAGGGCGTGTAA
Downstream 100 bases:
>100_bases GGTCATGATGGACTGGGTCACTATTGCTTTCTACGCCTTCTCCGCCGTCGCGGTCGTCTCCGCCGGTGCGGTGATCAGCG TGCGCAACCCGGTGTATGCC
Product: NADH dehydrogenase subunit I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I; NDH-1 subunit I
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MMNKITHYFKSLLLLELLGGLWLTLKYTFKPKYTVLYPMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAIT IDSAKREDGTRRTTRYDIDLFKCIFCGFCEESCPVDSIVETHILEYHFEKRGENIVNKPQLLAIGDRLEAEIAERRAADA AFR
Sequences:
>Translated_163_residues MMNKITHYFKSLLLLELLGGLWLTLKYTFKPKYTVLYPMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAIT IDSAKREDGTRRTTRYDIDLFKCIFCGFCEESCPVDSIVETHILEYHFEKRGENIVNKPQLLAIGDRLEAEIAERRAADA AFR >Mature_163_residues MMNKITHYFKSLLLLELLGGLWLTLKYTFKPKYTVLYPMEKFPQSPRFRGLHALRRYPNGEERCIACKLCEAVCPALAIT IDSAKREDGTRRTTRYDIDLFKCIFCGFCEESCPVDSIVETHILEYHFEKRGENIVNKPQLLAIGDRLEAEIAERRAADA AFR
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains
Homologues:
Organism=Homo sapiens, GI4505371, Length=154, Percent_Identity=60.3896103896104, Blast_Score=191, Evalue=3e-49, Organism=Escherichia coli, GI1788617, Length=141, Percent_Identity=37.5886524822695, Blast_Score=96, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17555194, Length=163, Percent_Identity=52.1472392638037, Blast_Score=176, Evalue=6e-45, Organism=Drosophila melanogaster, GI17864306, Length=154, Percent_Identity=58.4415584415584, Blast_Score=187, Evalue=2e-48,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NUOI_XANC8 (Q4UWB0)
Other databases:
- EMBL: CP000050 - RefSeq: YP_242683.1 - HSSP: P00198 - ProteinModelPortal: Q4UWB0 - SMR: Q4UWB0 - STRING: Q4UWB0 - GeneID: 3380052 - GenomeReviews: CP000050_GR - KEGG: xcb:XC_1597 - eggNOG: COG1143 - HOGENOM: HBG724359 - OMA: NKAADAP - PhylomeDB: Q4UWB0 - ProtClustDB: PRK05888 - BioCyc: XCAM314565:XC_1597-MONOMER - HAMAP: MF_01351 - InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR010226 - Gene3D: G3DSA:1.10.1060.10 - TIGRFAMs: TIGR01971
Pfam domain/function: PF00037 Fer4
EC number: =1.6.99.5
Molecular weight: Translated: 18883; Mature: 18883
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2; PS00028 ZINC_FINGER_C2H2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNKITHYFKSLLLLELLGGLWLTLKYTFKPKYTVLYPMEKFPQSPRFRGLHALRRYPNG CCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEECHHHCCCCCCHHHHHHHHCCCCC EERCIACKLCEAVCPALAITIDSAKREDGTRRTTRYDIDLFKCIFCGFCEESCPVDSIVE CHHHHHHHHHHHHHHHHEEEECCHHCCCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHH THILEYHFEKRGENIVNKPQLLAIGDRLEAEIAERRAADAAFR HHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMNKITHYFKSLLLLELLGGLWLTLKYTFKPKYTVLYPMEKFPQSPRFRGLHALRRYPNG CCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEECHHHCCCCCCHHHHHHHHCCCCC EERCIACKLCEAVCPALAITIDSAKREDGTRRTTRYDIDLFKCIFCGFCEESCPVDSIVE CHHHHHHHHHHHHHHHHEEEECCHHCCCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHH THILEYHFEKRGENIVNKPQLLAIGDRLEAEIAERRAADAAFR HHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA