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The map label for this gene is tonB2 [H]

Identifier: 66767830

GI number: 66767830

Start: 1810239

End: 1810919

Strand: Reverse

Name: tonB2 [H]

Synonym: XC_1504

Alternate gene names: 66767830

Gene position: 1810919-1810239 (Counterclockwise)

Preceding gene: 66767831

Following gene: 66767828

Centisome position: 35.17

GC content: 68.58

Gene sequence:

>681_bases
ATGATGGTTCGCACGCAATCGCAGGTTTCTTCCCGTCCCCTTGGCATCGACACCTCGCGCGTCCTGGCGATGAGCACGGC
CGTGGCGCTGCATCTGCTGGCCGGTGGCTTGTTGTTGATCCCGTTGTCGCACCACCAGGTCATGCAACCGCCCACGCCGA
AGGAGCGCTGGCTGATGCCGATCACCGTGCCGGCGACGCCGCCCCCGCCGCCGCTCGTGTTTCCGGTCGAGGTGACGTTC
AAGGCGCCCAGCACGCACACGCCCGTCATTGCCGACCCGGTGGTGAAGCAGCCATCGGTGACGCAGACAGCGGTGGTCGA
CACCGCGCACGTGGCGTTGGAGGCAGTGTCGGATACGGCGCCGACCATCAGCGCCCCGGCCGCCCCCCCTTCAAGCGGGC
CGGTGGACGCCGGGCAGCTGCACTATCTCAGCGCGCCCGCACCGAGCTATCCGGTGGCGGCACTGCGCGCCGGGCAACAG
GGCACGGTGATGCTGCGCGTGCTGGTCGGTACCGACGGCCGCCCGGCCGAAGTGAGCGTACAGACCAGTAGCGGTCACCG
CGCGCTCGATCTGGCCGCGCGTAGCCAGGTACTGCGCAGTTGGCGCTTCCAGCCGGCAATGCAGAACGGCCAGGCGGTGC
AGGCCTACGGGTTGGTGCCGGTGAGCTTTTCGTTGAATTGA

Upstream 100 bases:

>100_bases
CGCTTGTGCAGCCGTGCGCGCTGCGGTAAACCTACGCTACCGGATGGTGTAGTGCGTCCGGGCCGCGCTGGTCCTTTCCG
CAGTTCCGTTTTGGAGGTGG

Downstream 100 bases:

>100_bases
AGCGTTGACCGACGCGGCGGCCTGCAACTGCAGCCGCCGCACTGCTGCCAATCCCCACCTGCCGCCCCTCCTGCCGAGCA
GGCATGCGTGCTCGGCAGCA

Product: TonB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MMVRTQSQVSSRPLGIDTSRVLAMSTAVALHLLAGGLLLIPLSHHQVMQPPTPKERWLMPITVPATPPPPPLVFPVEVTF
KAPSTHTPVIADPVVKQPSVTQTAVVDTAHVALEAVSDTAPTISAPAAPPSSGPVDAGQLHYLSAPAPSYPVAALRAGQQ
GTVMLRVLVGTDGRPAEVSVQTSSGHRALDLAARSQVLRSWRFQPAMQNGQAVQAYGLVPVSFSLN

Sequences:

>Translated_226_residues
MMVRTQSQVSSRPLGIDTSRVLAMSTAVALHLLAGGLLLIPLSHHQVMQPPTPKERWLMPITVPATPPPPPLVFPVEVTF
KAPSTHTPVIADPVVKQPSVTQTAVVDTAHVALEAVSDTAPTISAPAAPPSSGPVDAGQLHYLSAPAPSYPVAALRAGQQ
GTVMLRVLVGTDGRPAEVSVQTSSGHRALDLAARSQVLRSWRFQPAMQNGQAVQAYGLVPVSFSLN
>Mature_226_residues
MMVRTQSQVSSRPLGIDTSRVLAMSTAVALHLLAGGLLLIPLSHHQVMQPPTPKERWLMPITVPATPPPPPLVFPVEVTF
KAPSTHTPVIADPVVKQPSVTQTAVVDTAHVALEAVSDTAPTISAPAAPPSSGPVDAGQLHYLSAPAPSYPVAALRAGQQ
GTVMLRVLVGTDGRPAEVSVQTSSGHRALDLAARSQVLRSWRFQPAMQNGQAVQAYGLVPVSFSLN

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 23695; Mature: 23695

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVRTQSQVSSRPLGIDTSRVLAMSTAVALHLLAGGLLLIPLSHHQVMQPPTPKERWLMP
CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHEEEE
ITVPATPPPPPLVFPVEVTFKAPSTHTPVIADPVVKQPSVTQTAVVDTAHVALEAVSDTA
EECCCCCCCCCEEEEEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PTISAPAAPPSSGPVDAGQLHYLSAPAPSYPVAALRAGQQGTVMLRVLVGTDGRPAEVSV
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCEEEE
QTSSGHRALDLAARSQVLRSWRFQPAMQNGQAVQAYGLVPVSFSLN
EECCCCEEEHHHHHHHHHHHHCCCHHHCCCCEEEEEEEEEEEEECC
>Mature Secondary Structure
MMVRTQSQVSSRPLGIDTSRVLAMSTAVALHLLAGGLLLIPLSHHQVMQPPTPKERWLMP
CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHEEEE
ITVPATPPPPPLVFPVEVTFKAPSTHTPVIADPVVKQPSVTQTAVVDTAHVALEAVSDTA
EECCCCCCCCCEEEEEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PTISAPAAPPSSGPVDAGQLHYLSAPAPSYPVAALRAGQQGTVMLRVLVGTDGRPAEVSV
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCEEEE
QTSSGHRALDLAARSQVLRSWRFQPAMQNGQAVQAYGLVPVSFSLN
EECCCCEEEHHHHHHHHHHHHCCCHHHCCCCEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10689178; 10984043 [H]