| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yijE [C]
Identifier: 66767817
GI number: 66767817
Start: 1796621
End: 1797508
Strand: Direct
Name: yijE [C]
Synonym: XC_1491
Alternate gene names: 66767817
Gene position: 1796621-1797508 (Clockwise)
Preceding gene: 66767812
Following gene: 66767822
Centisome position: 34.89
GC content: 67.91
Gene sequence:
>888_bases ATGAGTGCACAGCCGTCACTGCAACCGGCGCTTGGCGTGCGCGATTGGCGCACGCCGCTGGAACTGGTGTTCCTGGGAAT CGTATGGGGCTGCTCGTTCCTGTTCATGCGTGTGGCCGCGCCGCATTTCGGCGCCGCGGCATTGGTGGAAATTCGTCTCG CGCTGGGTGCCACAGTGTTGTTGCCGTTTTTGTGGGTGGCGCGCAGCCGCTTCCCGCTACACCGTTGGCCGATGCTGGCC GCCATCGGCGTGCTCAACTCGGCATTGCCGTTCCTGCTGTTCGCCTGGGGCGCGCAGCATGCGCCCGCGGCGGTGGGCGC CATCTGCAACGCGATGACGGTGTTGTTCACTGCCCTGATCGCGTTCGTGTTCTTTGGCGAACGCATCGGCACGCGCCGCG CGGTGGCACTGTTGATCGGCTTTATCGGCGTGCTGGTACTGGCCACCGGCAAGTCCGCCGGGCTCAGCGTGGGGCCGGCC GCGTTGGCCGGCGCCACCGCGTCGCTGCTGTATGGCATCGGCTACAACCTGGTGAAACGCCACATGGGCGATCTGCCGCC GGCAGCGTCGGCAGCCTCCACATTGGGGTGCAGTGCGCTGCTGCTGGCGCCGGTGGCGTGGTGGCAGTGGCCGAGCGCGC CGGTGCCGGCCAGCGCATGGGCCTGCGCCGGTGCATTGGGCGTGGTGTGCACCGGGCTGGCCTTCCTGATGTATTACCGC CTGATCCAGCGCATCGGCCCCGCGCGCGCCTCCACCGTCACCTATCTGGTGCCGGTGTTCGGCGCGCTGCTGGCCTGGGC ACTATTGGGCGAGGCACTGACCTGGACCATGCTGCTGGCCGCGGTATTGATCCTGGGCAGCGTGGCCTTCAGCCAACGCG CACGCTAA
Upstream 100 bases:
>100_bases TTTGTCGCTCCCCATCTCGATCCCGCGCCATGACCGCTCGCCTGCCCGATGTTCTTTCACGCGTGTGCACCGCCGCATCG CAGGCCAGGAGGGTGCGCGC
Downstream 100 bases:
>100_bases GCATCGGCAGTGTTCGAGAATTCGCAGCAATCCGCTCCTGCGATTCCCCATTCCCGATTCCCCATTCACGCCGCAGGCGG CGTCCGCACCGGCAACGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter Membrane Spanning Protein; Transmembrane Drug/Metabolite Transporter Family Protein; Integral Membrane; DMT Family Permease; Transmembrane Protein; Transporter Drug/Metabolite Exporter Family; Transmembrane Component Of ABC Transporter; Permease; Permease Of Drug/Metabolite Transporter Superfamily; Drug/Metabolite Transporter Superfamily Permease; Transporter DME Family DMT Superfamily; Drug/Metabolite Exporter Family Protein; DMT Transporter
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSAQPSLQPALGVRDWRTPLELVFLGIVWGCSFLFMRVAAPHFGAAALVEIRLALGATVLLPFLWVARSRFPLHRWPMLA AIGVLNSALPFLLFAWGAQHAPAAVGAICNAMTVLFTALIAFVFFGERIGTRRAVALLIGFIGVLVLATGKSAGLSVGPA ALAGATASLLYGIGYNLVKRHMGDLPPAASAASTLGCSALLLAPVAWWQWPSAPVPASAWACAGALGVVCTGLAFLMYYR LIQRIGPARASTVTYLVPVFGALLAWALLGEALTWTMLLAAVLILGSVAFSQRAR
Sequences:
>Translated_295_residues MSAQPSLQPALGVRDWRTPLELVFLGIVWGCSFLFMRVAAPHFGAAALVEIRLALGATVLLPFLWVARSRFPLHRWPMLA AIGVLNSALPFLLFAWGAQHAPAAVGAICNAMTVLFTALIAFVFFGERIGTRRAVALLIGFIGVLVLATGKSAGLSVGPA ALAGATASLLYGIGYNLVKRHMGDLPPAASAASTLGCSALLLAPVAWWQWPSAPVPASAWACAGALGVVCTGLAFLMYYR LIQRIGPARASTVTYLVPVFGALLAWALLGEALTWTMLLAAVLILGSVAFSQRAR >Mature_294_residues SAQPSLQPALGVRDWRTPLELVFLGIVWGCSFLFMRVAAPHFGAAALVEIRLALGATVLLPFLWVARSRFPLHRWPMLAA IGVLNSALPFLLFAWGAQHAPAAVGAICNAMTVLFTALIAFVFFGERIGTRRAVALLIGFIGVLVLATGKSAGLSVGPAA LAGATASLLYGIGYNLVKRHMGDLPPAASAASTLGCSALLLAPVAWWQWPSAPVPASAWACAGALGVVCTGLAFLMYYRL IQRIGPARASTVTYLVPVFGALLAWALLGEALTWTMLLAAVLILGSVAFSQRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31006; Mature: 30875
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQPSLQPALGVRDWRTPLELVFLGIVWGCSFLFMRVAAPHFGAAALVEIRLALGATVL CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LPFLWVARSRFPLHRWPMLAAIGVLNSALPFLLFAWGAQHAPAAVGAICNAMTVLFTALI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AFVFFGERIGTRRAVALLIGFIGVLVLATGKSAGLSVGPAALAGATASLLYGIGYNLVKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HMGDLPPAASAASTLGCSALLLAPVAWWQWPSAPVPASAWACAGALGVVCTGLAFLMYYR HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LIQRIGPARASTVTYLVPVFGALLAWALLGEALTWTMLLAAVLILGSVAFSQRAR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAQPSLQPALGVRDWRTPLELVFLGIVWGCSFLFMRVAAPHFGAAALVEIRLALGATVL CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LPFLWVARSRFPLHRWPMLAAIGVLNSALPFLLFAWGAQHAPAAVGAICNAMTVLFTALI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AFVFFGERIGTRRAVALLIGFIGVLVLATGKSAGLSVGPAALAGATASLLYGIGYNLVKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HMGDLPPAASAASTLGCSALLLAPVAWWQWPSAPVPASAWACAGALGVVCTGLAFLMYYR HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LIQRIGPARASTVTYLVPVFGALLAWALLGEALTWTMLLAAVLILGSVAFSQRAR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA