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The map label for this gene is visC [H]

Identifier: 66767796

GI number: 66767796

Start: 1770277

End: 1771455

Strand: Direct

Name: visC [H]

Synonym: XC_1470

Alternate gene names: 66767796

Gene position: 1770277-1771455 (Clockwise)

Preceding gene: 66767795

Following gene: 66767801

Centisome position: 34.38

GC content: 68.7

Gene sequence:

>1179_bases
ATGCAGACGGTGGATATCGCGGTGATCGGTGCCGGGCCGGTTGGCCTGGCGTTTGCACGGACGCTGGCCGGCAGCGGGTT
ATCGGTCACGTTGATCGACCAGCAATCGCGCGAACACCTTGCCGATCCGGCCTTCGATGGACGCGAGATCGCGCTGACGT
ATGCATCGCGCGCGCTGCTGGAAACGGGTGGCCTCTGGCAGCACGTGTCGCCCGATGCGATCTCGCCACTGCGCGATGCG
CGGGTAATGGACGGCCATTCACCGTTTGCGCTGACTTTCGCATCCGCCGCGCGGCACGCCGGCGACCTGGGCTGGCTGGT
ACCCAATCATCTGATCCGCCGCGCCGCGTGGCAGGCCGTGCAGGCGCAGCCGGGGCTGGAGATCCGCTGCGGCCATCGCG
TGCGCGCGCTACAGCACACGCCCACGCGTGTGTGTGTGGAACTCGCCGATGGGGCGCGGCTGTCGGCGCGGCTGCTGGTT
GCAGCCGACAGCCGGTTTTCCAGCACGCGGCGGTTGCTTGGCATCGGCGCGCAGCTGCGCGATTTCGGCAAGACCATGTT
GGTGTGCCGCGTGCGCCATGCAGTGCCGCACCACCATGCAGCCTGGGAGTGGTTTGGCTATGGCAAGACGCTGGCCTTGC
TGCCGCTGAAGGGCAACCGCGCTGGCGCCGTGCTGACCTTGCCGCCACGCCAGGTCGAGGCTTTGCTGGCGATGGACGCG
CGCGCGTTCGGCGCGGCGGTGACGGACGCCTTCGAACACCGGCTCGGCCCGATGCAGCAGGACGGCAGCCGCCATGCGTA
TCCGTTGATCGCAACCTATGCACAACAGTTTGCCGGCGAGCGTGCGGCGTTGATCGGCGATGCGGCGGTGGGCATGCACC
CGGTCACCGCGCACGGCTTCAACTTCGGGTTGCAAAGCCAGGCGCGTCTGGCCGAGCGCGTGCTGGCCGCGGCCGCGCGC
GGTGGCGATATCGGCGCCGCAGCGGTCGTGCAGGGATATGCGCGCGCGCATCGTCTGGCGACGCGCCCGCTGTATGAAGC
AACCAATGCACTGGCCGCGCTGTACACCGACGATCGTGCACCGGCCCGCTTGCTGCGACGTGGCGCCTTGCGTGCGGCCA
ATGCGGTGGCGCCGTTCAAGCAGGCGATTGCAGCGCATCTGACCCAGCGGAGCGTTTGA

Upstream 100 bases:

>100_bases
CGTGCCGCGTCCTGCGGCACGGTGCGCGGGTTGATCCTGATCAAGCCAGCGCGATACGGCCGCTCGTAGACTGTGCACCT
CGCAATGCGCGGAGTGCAGC

Downstream 100 bases:

>100_bases
GGCGATGAAGTGGCAGCGGCAAGCAACGCGTGCAGCGTTGCGCTGTCATCGTCCTGCGTCACCTTGCAACGGCGTCCGAT
GCGTGGTGTTGCAGGACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MQTVDIAVIGAGPVGLAFARTLAGSGLSVTLIDQQSREHLADPAFDGREIALTYASRALLETGGLWQHVSPDAISPLRDA
RVMDGHSPFALTFASAARHAGDLGWLVPNHLIRRAAWQAVQAQPGLEIRCGHRVRALQHTPTRVCVELADGARLSARLLV
AADSRFSSTRRLLGIGAQLRDFGKTMLVCRVRHAVPHHHAAWEWFGYGKTLALLPLKGNRAGAVLTLPPRQVEALLAMDA
RAFGAAVTDAFEHRLGPMQQDGSRHAYPLIATYAQQFAGERAALIGDAAVGMHPVTAHGFNFGLQSQARLAERVLAAAAR
GGDIGAAAVVQGYARAHRLATRPLYEATNALAALYTDDRAPARLLRRGALRAANAVAPFKQAIAAHLTQRSV

Sequences:

>Translated_392_residues
MQTVDIAVIGAGPVGLAFARTLAGSGLSVTLIDQQSREHLADPAFDGREIALTYASRALLETGGLWQHVSPDAISPLRDA
RVMDGHSPFALTFASAARHAGDLGWLVPNHLIRRAAWQAVQAQPGLEIRCGHRVRALQHTPTRVCVELADGARLSARLLV
AADSRFSSTRRLLGIGAQLRDFGKTMLVCRVRHAVPHHHAAWEWFGYGKTLALLPLKGNRAGAVLTLPPRQVEALLAMDA
RAFGAAVTDAFEHRLGPMQQDGSRHAYPLIATYAQQFAGERAALIGDAAVGMHPVTAHGFNFGLQSQARLAERVLAAAAR
GGDIGAAAVVQGYARAHRLATRPLYEATNALAALYTDDRAPARLLRRGALRAANAVAPFKQAIAAHLTQRSV
>Mature_392_residues
MQTVDIAVIGAGPVGLAFARTLAGSGLSVTLIDQQSREHLADPAFDGREIALTYASRALLETGGLWQHVSPDAISPLRDA
RVMDGHSPFALTFASAARHAGDLGWLVPNHLIRRAAWQAVQAQPGLEIRCGHRVRALQHTPTRVCVELADGARLSARLLV
AADSRFSSTRRLLGIGAQLRDFGKTMLVCRVRHAVPHHHAAWEWFGYGKTLALLPLKGNRAGAVLTLPPRQVEALLAMDA
RAFGAAVTDAFEHRLGPMQQDGSRHAYPLIATYAQQFAGERAALIGDAAVGMHPVTAHGFNFGLQSQARLAERVLAAAAR
GGDIGAAAVVQGYARAHRLATRPLYEATNALAALYTDDRAPARLLRRGALRAANAVAPFKQAIAAHLTQRSV

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=385, Percent_Identity=26.2337662337662, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI32967307, Length=328, Percent_Identity=27.1341463414634, Blast_Score=105, Evalue=5e-23,
Organism=Escherichia coli, GI1789273, Length=382, Percent_Identity=29.8429319371728, Blast_Score=156, Evalue=3e-39,
Organism=Escherichia coli, GI1789274, Length=386, Percent_Identity=30.0518134715026, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1786883, Length=375, Percent_Identity=27.7333333333333, Blast_Score=126, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI25146631, Length=437, Percent_Identity=24.0274599542334, Blast_Score=104, Evalue=8e-23,
Organism=Drosophila melanogaster, GI19920760, Length=374, Percent_Identity=22.9946524064171, Blast_Score=96, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41893; Mature: 41893

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTVDIAVIGAGPVGLAFARTLAGSGLSVTLIDQQSREHLADPAFDGREIALTYASRALL
CCEEEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCCCCCEEEEHHHHHHHH
ETGGLWQHVSPDAISPLRDARVMDGHSPFALTFASAARHAGDLGWLVPNHLIRRAAWQAV
HCCCCCCCCCCHHCCHHHHCCCCCCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QAQPGLEIRCGHRVRALQHTPTRVCVELADGARLSARLLVAADSRFSSTRRLLGIGAQLR
HCCCCCEEECCCHHHHHHCCCHHHHEECCCCCCEEEEEEEEECCCHHHHHHHHHCCHHHH
DFGKTMLVCRVRHAVPHHHAAWEWFGYGKTLALLPLKGNRAGAVLTLPPRQVEALLAMDA
HHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHH
RAFGAAVTDAFEHRLGPMQQDGSRHAYPLIATYAQQFAGERAALIGDAAVGMHPVTAHGF
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHCCCCCEEECCC
NFGLQSQARLAERVLAAAARGGDIGAAAVVQGYARAHRLATRPLYEATNALAALYTDDRA
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHEEEEEECCCH
PARLLRRGALRAANAVAPFKQAIAAHLTQRSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTVDIAVIGAGPVGLAFARTLAGSGLSVTLIDQQSREHLADPAFDGREIALTYASRALL
CCEEEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCCCCCEEEEHHHHHHHH
ETGGLWQHVSPDAISPLRDARVMDGHSPFALTFASAARHAGDLGWLVPNHLIRRAAWQAV
HCCCCCCCCCCHHCCHHHHCCCCCCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QAQPGLEIRCGHRVRALQHTPTRVCVELADGARLSARLLVAADSRFSSTRRLLGIGAQLR
HCCCCCEEECCCHHHHHHCCCHHHHEECCCCCCEEEEEEEEECCCHHHHHHHHHCCHHHH
DFGKTMLVCRVRHAVPHHHAAWEWFGYGKTLALLPLKGNRAGAVLTLPPRQVEALLAMDA
HHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHH
RAFGAAVTDAFEHRLGPMQQDGSRHAYPLIATYAQQFAGERAALIGDAAVGMHPVTAHGF
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHCCCCCEEECCC
NFGLQSQARLAERVLAAAARGGDIGAAAVVQGYARAHRLATRPLYEATNALAALYTDDRA
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHEEEEEECCCH
PARLLRRGALRAANAVAPFKQAIAAHLTQRSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]