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The map label for this gene is ybfB [H]

Identifier: 66767782

GI number: 66767782

Start: 1757156

End: 1758385

Strand: Reverse

Name: ybfB [H]

Synonym: XC_1456

Alternate gene names: 66767782

Gene position: 1758385-1757156 (Counterclockwise)

Preceding gene: 66767783

Following gene: 66767777

Centisome position: 34.15

GC content: 67.72

Gene sequence:

>1230_bases
ATGAGCACGTCTGCGGCACCACGCACGCGTGCGCACTGGGGTTTGCTGGTCACCGCCTCGGCGATGCTGATGCTGACCAT
GGGCGCGCGCCAGACCACCGGATTGTTCGTGGAGCCGATCCATCGCCAGACCGGCATCGGGATCGCATCGATCAGTTTTG
CGCTGGCGATCGGGCAACTGGTCTGGGGCGCGGTGCAACCGGTGTTCGGTGCGATCGCCGATCAGCGCGGGCCGCTCCCG
GTGCTGATGTTCGGCGGCGTGCTGCTGGCAGCGGGATTGGGCCTGGCGCCGTGGTGGACCAGCGAATGGGGCTTGATCGT
GTCGCTCGGCGTGCTGGCGGCGGCCGGTGCCGGCGCGGGCAGTTTTTCGGTCCTGATCGGCGCCACCGCGCACCGCATCG
CGCCGGAACGGCGCTCGTTCGCGGCCGGCCTGATCAACGCGGGCGGCTCGCTTGGCCAGTTCGTGTTCGCACCGCTGGTC
CAGCTCACGATCGGCGCGGCCGGCTGGGCGAAGGCGATGACCGGGCTGGCACTGGTGTCGCTGCTGACCCTGCCGCTGGC
CTGGCCGCTGCGGCGCGTGCCATCTGCAACCGGTGCGCACACGGGCGCAGTTGCGGGGGAGATCAGCTTGCGTGCGCAGT
TGCAGCTGGCGCTGCGCGATCGCAGTTATTGGTGCTTGCATCTGGGCTTTTTCACCTGCGGCGTGCACATCGCCTTCCTG
GTCACGCACCTCCCTGGCGAGGTGGCGCTGTGTGGTTTGCCGGCCAGCGTGTCGGCGGTGTCGATCGCGTTGATCGGCCT
GTTCAACGTGGCCGGCAGCCTCACGATCGGCAAGCTGGGCGAGCGCGTCCGCATGAAGTGGTTGCTCACCGCGATGTATG
CCAGCCGCGCGGTGATGATCGGCCTGTACCTGATTGCGCCGCCTACACCACTGACGTTCTATCTGTTCGCCGCGGGATTG
GGATTTACCTGGCTGGCCACGGTGCCGCCCACGGCCGGCTTGATCGGCAAGCTGTTTGGCCCGCGCTATCTGGGCACCTT
GTTCGGACTGATGCTGCTGTCGCACCAGCTCGGCGGCTTCTTCGGCGCGTGGCTGGGCGGCCTGGCGCTGGAACACTCCG
GCAACTACCTGTGGATGTGGTACGGCGACATCGTGCTGGCCGTTGCAGCGGCGTTGGTGAACCTGCCGATTCGTGAAGCA
GTGCCCGTGCGCCACGTTGCGGTGGCGTAA

Upstream 100 bases:

>100_bases
ACGCGGCGCAGGTGCAGCTGGAGACGCTGTTCGGCGCAGCCCCCACCGCGCAGTTGCATGCAACACTGGCACGTCTGGAT
GCCGTGTTGGAGGCACACGC

Downstream 100 bases:

>100_bases
GGCGGGCGGTGGCAGTGGCAAAGCGGTGGCTGGCGCCGTCTGGGCAAGACGCCGGATGCGACGCCTATCGAAGCGATGGC
TTACATCGCTGATTGCTCCA

Product: transmembrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MSTSAAPRTRAHWGLLVTASAMLMLTMGARQTTGLFVEPIHRQTGIGIASISFALAIGQLVWGAVQPVFGAIADQRGPLP
VLMFGGVLLAAGLGLAPWWTSEWGLIVSLGVLAAAGAGAGSFSVLIGATAHRIAPERRSFAAGLINAGGSLGQFVFAPLV
QLTIGAAGWAKAMTGLALVSLLTLPLAWPLRRVPSATGAHTGAVAGEISLRAQLQLALRDRSYWCLHLGFFTCGVHIAFL
VTHLPGEVALCGLPASVSAVSIALIGLFNVAGSLTIGKLGERVRMKWLLTAMYASRAVMIGLYLIAPPTPLTFYLFAAGL
GFTWLATVPPTAGLIGKLFGPRYLGTLFGLMLLSHQLGGFFGAWLGGLALEHSGNYLWMWYGDIVLAVAAALVNLPIREA
VPVRHVAVA

Sequences:

>Translated_409_residues
MSTSAAPRTRAHWGLLVTASAMLMLTMGARQTTGLFVEPIHRQTGIGIASISFALAIGQLVWGAVQPVFGAIADQRGPLP
VLMFGGVLLAAGLGLAPWWTSEWGLIVSLGVLAAAGAGAGSFSVLIGATAHRIAPERRSFAAGLINAGGSLGQFVFAPLV
QLTIGAAGWAKAMTGLALVSLLTLPLAWPLRRVPSATGAHTGAVAGEISLRAQLQLALRDRSYWCLHLGFFTCGVHIAFL
VTHLPGEVALCGLPASVSAVSIALIGLFNVAGSLTIGKLGERVRMKWLLTAMYASRAVMIGLYLIAPPTPLTFYLFAAGL
GFTWLATVPPTAGLIGKLFGPRYLGTLFGLMLLSHQLGGFFGAWLGGLALEHSGNYLWMWYGDIVLAVAAALVNLPIREA
VPVRHVAVA
>Mature_408_residues
STSAAPRTRAHWGLLVTASAMLMLTMGARQTTGLFVEPIHRQTGIGIASISFALAIGQLVWGAVQPVFGAIADQRGPLPV
LMFGGVLLAAGLGLAPWWTSEWGLIVSLGVLAAAGAGAGSFSVLIGATAHRIAPERRSFAAGLINAGGSLGQFVFAPLVQ
LTIGAAGWAKAMTGLALVSLLTLPLAWPLRRVPSATGAHTGAVAGEISLRAQLQLALRDRSYWCLHLGFFTCGVHIAFLV
THLPGEVALCGLPASVSAVSIALIGLFNVAGSLTIGKLGERVRMKWLLTAMYASRAVMIGLYLIAPPTPLTFYLFAAGLG
FTWLATVPPTAGLIGKLFGPRYLGTLFGLMLLSHQLGGFFGAWLGGLALEHSGNYLWMWYGDIVLAVAAALVNLPIREAV
PVRHVAVA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI42475555, Length=397, Percent_Identity=28.7153652392947, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42658; Mature: 42527

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSAAPRTRAHWGLLVTASAMLMLTMGARQTTGLFVEPIHRQTGIGIASISFALAIGQL
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHCCCHHHHHHHHHHHHH
VWGAVQPVFGAIADQRGPLPVLMFGGVLLAAGLGLAPWWTSEWGLIVSLGVLAAAGAGAG
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
SFSVLIGATAHRIAPERRSFAAGLINAGGSLGQFVFAPLVQLTIGAAGWAKAMTGLALVS
CEEEEEECHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLTLPLAWPLRRVPSATGAHTGAVAGEISLRAQLQLALRDRSYWCLHLGFFTCGVHIAFL
HHHHHHHHHHHHCCCCCCCCCCCEECEEEHHHEEEEEECCCCEEEEHHHHHHHHHHHHHH
VTHLPGEVALCGLPASVSAVSIALIGLFNVAGSLTIGKLGERVRMKWLLTAMYASRAVMI
HHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
GLYLIAPPTPLTFYLFAAGLGFTWLATVPPTAGLIGKLFGPRYLGTLFGLMLLSHQLGGF
EEEEECCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
FGAWLGGLALEHSGNYLWMWYGDIVLAVAAALVNLPIREAVPVRHVAVA
HHHHHHCEEEEECCCEEEEEHHHHHHHHHHHHHCCCHHHCCCCHHEECC
>Mature Secondary Structure 
STSAAPRTRAHWGLLVTASAMLMLTMGARQTTGLFVEPIHRQTGIGIASISFALAIGQL
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHCCCHHHHHHHHHHHHH
VWGAVQPVFGAIADQRGPLPVLMFGGVLLAAGLGLAPWWTSEWGLIVSLGVLAAAGAGAG
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
SFSVLIGATAHRIAPERRSFAAGLINAGGSLGQFVFAPLVQLTIGAAGWAKAMTGLALVS
CEEEEEECHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLTLPLAWPLRRVPSATGAHTGAVAGEISLRAQLQLALRDRSYWCLHLGFFTCGVHIAFL
HHHHHHHHHHHHCCCCCCCCCCCEECEEEHHHEEEEEECCCCEEEEHHHHHHHHHHHHHH
VTHLPGEVALCGLPASVSAVSIALIGLFNVAGSLTIGKLGERVRMKWLLTAMYASRAVMI
HHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
GLYLIAPPTPLTFYLFAAGLGFTWLATVPPTAGLIGKLFGPRYLGTLFGLMLLSHQLGGF
EEEEECCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
FGAWLGGLALEHSGNYLWMWYGDIVLAVAAALVNLPIREAVPVRHVAVA
HHHHHHCEEEEECCCEEEEEHHHHHHHHHHHHHCCCHHHCCCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]