| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is aspA [H]
Identifier: 66767776
GI number: 66767776
Start: 1746249
End: 1747613
Strand: Reverse
Name: aspA [H]
Synonym: XC_1450
Alternate gene names: 66767776
Gene position: 1747613-1746249 (Counterclockwise)
Preceding gene: 66767777
Following gene: 66767775
Centisome position: 33.94
GC content: 64.18
Gene sequence:
>1365_bases ATGCAACTACATCGCAGGCGATACCTCGCGCTGTTGATCGGCGCCTTGGTGATCGGAACTCCCCCCATGCTGGCCAGCGC CGCACAGCCGGCAAGCACTGCGCGTGCCAGCGCCGCAGGCGACCCGCTGTATCGCTACCAATGGCATCTCTCCAACCAGG GGCAGCCGGTGATTGGCGACAGCCGTCCCGTGCCCGGCGTCGACATGGATGTAGATCTCCTGCATGCACTGGGCATTCGC GGCCGCGGCGTGCGTGTGGCCGTGGTGGATAACGGCCTGGAGATCGGCCACGAAGATCTCGCTGGCAACATCATCCCGAA TGGGTCGCACAATTTCGGCAATGGCTCGCACGATCCCACGCCCAGTGACCCGGGCTTTGGTCACGGCACTTCGGTGGCGG GCATCATCGCTGCGGTTGGCTGGAATGGCCGTGGCGGTCGCGGCGTTGCACCCGAGGCCTTGCTGGCCGGATTCGATTTT CTAGGCAGCGATTCTGCCGGAAGTTATGCCGAGGTCCGCTATTCCTGGGGTGATGGGCCGGAGGCGCGCACCCTCGATGT CTTCAACAACAGCTGGGGCTCGGCGCCGGACTTCTACCCCGACGTTTCATTGGAAGAGGGTCAGTCCTGGGAAGCGCTGA TGCGCTCGACACGCGGCGGGCTGGGCGGCATCTACATCAAGTCGGCCGGCAACAGCTTCAGGCGTGTTCGCGTCCGCGAT GCCGAGGGCAGGATCGTCAATCTCTGCAGCGACCTGTCACGCACGTTGAATGTCGGTTGCCTGCTCACCAACGTGGACCC ACTCAGCAATATGCCCGCCACCGTCGTCGTCGCCAGCCTGGACGCCACCGGCAAGCGGGCCTCGTACTCGTCATCCGGTT CGGCGTTGTGGATCTCCGGTCTGGGCGGTGAGTTCGGCTACCAGCGCAAGTTCTATCCCAATGCGGCCCAGGTTTTCGCT CCTGAAACCGCGCCCTTCGCCTACGATCCGGCGATCGTCACCACCGATCTCAGCGGTTGCAGCGCGGGTGACAACGTGGA TGGCACCACCGTGGAAAATGCACTGACCGGCAGCACGTCAAGGATCGACGCATCCTGCAACTACAGCGCGCTGATGAACG GCACATCTGCGGCGGCGCCAACCGTCTCCGGTGTTGCAGCGCTCATTCTCGGTGCCAACCCCAGCCTGACCGCGCGCGAT GTCAAATACATCCTGGCCAAGACCGCGCGCCAGATCGATCCCTGGCAGCCCGCATCGGTCTACCAGGGCAGCGTGATCGA CCCTGGCTGGATCACCAACGCCGCCGGGCATCATTTCAGCAACTGGTATGGCTTCGGCCTGGCCGACGGCGCCGCAGCCG TCTAA
Upstream 100 bases:
>100_bases CCTACCTGCGCGATGGAGTGTGAGCCGGCCGATTTTTGATCGGTCGGACGGGTGTCTGTGCCACTTCGACTGTGTCACCC CTCCACTGGAGTCAAACGGA
Downstream 100 bases:
>100_bases GAAGCGACCTACTTCAAGCCGCTGCCGCCGGTGCGTGATACGCAATGGGTTGCCTCCACCGCGGCTGCAAGCCAGATCGG TGGACCGGCGCGACCGGCCA
Product: extracellular serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MQLHRRRYLALLIGALVIGTPPMLASAAQPASTARASAAGDPLYRYQWHLSNQGQPVIGDSRPVPGVDMDVDLLHALGIR GRGVRVAVVDNGLEIGHEDLAGNIIPNGSHNFGNGSHDPTPSDPGFGHGTSVAGIIAAVGWNGRGGRGVAPEALLAGFDF LGSDSAGSYAEVRYSWGDGPEARTLDVFNNSWGSAPDFYPDVSLEEGQSWEALMRSTRGGLGGIYIKSAGNSFRRVRVRD AEGRIVNLCSDLSRTLNVGCLLTNVDPLSNMPATVVVASLDATGKRASYSSSGSALWISGLGGEFGYQRKFYPNAAQVFA PETAPFAYDPAIVTTDLSGCSAGDNVDGTTVENALTGSTSRIDASCNYSALMNGTSAAAPTVSGVAALILGANPSLTARD VKYILAKTARQIDPWQPASVYQGSVIDPGWITNAAGHHFSNWYGFGLADGAAAV
Sequences:
>Translated_454_residues MQLHRRRYLALLIGALVIGTPPMLASAAQPASTARASAAGDPLYRYQWHLSNQGQPVIGDSRPVPGVDMDVDLLHALGIR GRGVRVAVVDNGLEIGHEDLAGNIIPNGSHNFGNGSHDPTPSDPGFGHGTSVAGIIAAVGWNGRGGRGVAPEALLAGFDF LGSDSAGSYAEVRYSWGDGPEARTLDVFNNSWGSAPDFYPDVSLEEGQSWEALMRSTRGGLGGIYIKSAGNSFRRVRVRD AEGRIVNLCSDLSRTLNVGCLLTNVDPLSNMPATVVVASLDATGKRASYSSSGSALWISGLGGEFGYQRKFYPNAAQVFA PETAPFAYDPAIVTTDLSGCSAGDNVDGTTVENALTGSTSRIDASCNYSALMNGTSAAAPTVSGVAALILGANPSLTARD VKYILAKTARQIDPWQPASVYQGSVIDPGWITNAAGHHFSNWYGFGLADGAAAV >Mature_454_residues MQLHRRRYLALLIGALVIGTPPMLASAAQPASTARASAAGDPLYRYQWHLSNQGQPVIGDSRPVPGVDMDVDLLHALGIR GRGVRVAVVDNGLEIGHEDLAGNIIPNGSHNFGNGSHDPTPSDPGFGHGTSVAGIIAAVGWNGRGGRGVAPEALLAGFDF LGSDSAGSYAEVRYSWGDGPEARTLDVFNNSWGSAPDFYPDVSLEEGQSWEALMRSTRGGLGGIYIKSAGNSFRRVRVRD AEGRIVNLCSDLSRTLNVGCLLTNVDPLSNMPATVVVASLDATGKRASYSSSGSALWISGLGGEFGYQRKFYPNAAQVFA PETAPFAYDPAIVTTDLSGCSAGDNVDGTTVENALTGSTSRIDASCNYSALMNGTSAAAPTVSGVAALILGANPSLTARD VKYILAKTARQIDPWQPASVYQGSVIDPGWITNAAGHHFSNWYGFGLADGAAAV
Specific function: Agent of furonculosis [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI20336180, Length=436, Percent_Identity=28.4403669724771, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI4505577, Length=436, Percent_Identity=28.4403669724771, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI20336188, Length=437, Percent_Identity=28.604118993135, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI27894285, Length=437, Percent_Identity=28.604118993135, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI20336182, Length=436, Percent_Identity=28.4403669724771, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI299523015, Length=435, Percent_Identity=26.4367816091954, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI20336190, Length=437, Percent_Identity=28.604118993135, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI20336184, Length=436, Percent_Identity=28.4403669724771, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI76443679, Length=425, Percent_Identity=27.2941176470588, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI4505579, Length=427, Percent_Identity=27.8688524590164, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI20336246, Length=435, Percent_Identity=26.4367816091954, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI20336244, Length=422, Percent_Identity=27.9620853080569, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI20336186, Length=420, Percent_Identity=27.6190476190476, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI20336248, Length=431, Percent_Identity=26.9141531322506, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI20336242, Length=213, Percent_Identity=31.4553990610329, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI295424143, Length=213, Percent_Identity=30.9859154929577, Blast_Score=77, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71988321, Length=421, Percent_Identity=27.5534441805226, Blast_Score=105, Evalue=7e-23, Organism=Caenorhabditis elegans, GI71987206, Length=441, Percent_Identity=27.437641723356, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71983555, Length=429, Percent_Identity=26.1072261072261, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71988297, Length=420, Percent_Identity=26.6666666666667, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI25141268, Length=424, Percent_Identity=26.1792452830189, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71988312, Length=215, Percent_Identity=31.1627906976744, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71988308, Length=215, Percent_Identity=31.1627906976744, Blast_Score=78, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71988315, Length=203, Percent_Identity=31.5270935960591, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71988301, Length=203, Percent_Identity=31.5270935960591, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324091, Length=186, Percent_Identity=32.258064516129, Blast_Score=80, Evalue=8e-16, Organism=Drosophila melanogaster, GI24642488, Length=425, Percent_Identity=28, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24642484, Length=425, Percent_Identity=28, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24642486, Length=425, Percent_Identity=28, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI281360987, Length=425, Percent_Identity=27.7647058823529, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24642494, Length=425, Percent_Identity=27.7647058823529, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24642490, Length=425, Percent_Identity=27.7647058823529, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI45555723, Length=425, Percent_Identity=27.7647058823529, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24642492, Length=425, Percent_Identity=27.7647058823529, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI17136192, Length=422, Percent_Identity=27.9620853080569, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI281360985, Length=158, Percent_Identity=33.5443037974684, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008979 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR002884 [H]
Pfam domain/function: PF01483 P_proprotein; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 47314; Mature: 47314
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLHRRRYLALLIGALVIGTPPMLASAAQPASTARASAAGDPLYRYQWHLSNQGQPVIGD CCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCCCC SRPVPGVDMDVDLLHALGIRGRGVRVAVVDNGLEIGHEDLAGNIIPNGSHNFGNGSHDPT CCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC PSDPGFGHGTSVAGIIAAVGWNGRGGRGVAPEALLAGFDFLGSDSAGSYAEVRYSWGDGP CCCCCCCCCCHHHHHHEEECCCCCCCCCCCHHHHHHCCHHCCCCCCCCEEEEEEECCCCC EARTLDVFNNSWGSAPDFYPDVSLEEGQSWEALMRSTRGGLGGIYIKSAGNSFRRVRVRD CCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEEEC AEGRIVNLCSDLSRTLNVGCLLTNVDPLSNMPATVVVASLDATGKRASYSSSGSALWISG CCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEC LGGEFGYQRKFYPNAAQVFAPETAPFAYDPAIVTTDLSGCSAGDNVDGTTVENALTGSTS CCCCCCCCCEECCCHHHEECCCCCCCEECCEEEEECCCCCCCCCCCCCCCHHHHHCCCCC RIDASCNYSALMNGTSAAAPTVSGVAALILGANPSLTARDVKYILAKTARQIDPWQPASV EEECCCCHHHHCCCCCCCCCHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHH YQGSVIDPGWITNAAGHHFSNWYGFGLADGAAAV CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure MQLHRRRYLALLIGALVIGTPPMLASAAQPASTARASAAGDPLYRYQWHLSNQGQPVIGD CCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCCCC SRPVPGVDMDVDLLHALGIRGRGVRVAVVDNGLEIGHEDLAGNIIPNGSHNFGNGSHDPT CCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC PSDPGFGHGTSVAGIIAAVGWNGRGGRGVAPEALLAGFDFLGSDSAGSYAEVRYSWGDGP CCCCCCCCCCHHHHHHEEECCCCCCCCCCCHHHHHHCCHHCCCCCCCCEEEEEEECCCCC EARTLDVFNNSWGSAPDFYPDVSLEEGQSWEALMRSTRGGLGGIYIKSAGNSFRRVRVRD CCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEEEC AEGRIVNLCSDLSRTLNVGCLLTNVDPLSNMPATVVVASLDATGKRASYSSSGSALWISG CCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEC LGGEFGYQRKFYPNAAQVFAPETAPFAYDPAIVTTDLSGCSAGDNVDGTTVENALTGSTS CCCCCCCCCEECCCHHHEECCCCCCCEECCEEEEECCCCCCCCCCCCCCCHHHHHCCCCC RIDASCNYSALMNGTSAAAPTVSGVAALILGANPSLTARDVKYILAKTARQIDPWQPASV EEECCCCHHHHCCCCCCCCCHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHH YQGSVIDPGWITNAAGHHFSNWYGFGLADGAAAV CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1468618 [H]