| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is zur [H]
Identifier: 66767756
GI number: 66767756
Start: 1725134
End: 1725652
Strand: Direct
Name: zur [H]
Synonym: XC_1430
Alternate gene names: 66767756
Gene position: 1725134-1725652 (Clockwise)
Preceding gene: 66767755
Following gene: 66767758
Centisome position: 33.51
GC content: 65.51
Gene sequence:
>519_bases ATGACCAAGCACACGCACACCCAAACGCACGACCAGGAACACGCCTGCACGGCCCCGCACCACCACGTGGACGATGCCAA CAGCTTCGTACGTGCGGTAGAGCGCGCTTGCAGCGAACGCGGCCTGCGGCTGACGCCGATCCGCGCCAACGTACTGCGGC TGATCGCCGATGCCGGCAAACCGGTCAAGGCCTACGAGCTGCTGGACTGGGTGCGCGAAGGCAAGGGTGTGGGCGCCGAC GCCCCGCCAACGGTGTACCGCGCGCTGGATTTTTTGATGGCCAATGGCTTCGTGCACAAGCTCGAATCGGTCAATGCCTT CGTCGCCTGCCATCACCCCAACAGCGCCCAGCACTCGGTGCCGTTCCTGATCTGCGACCGCTGCCATAGCGCGGTGGAGC TGGAAGACCGCGATGTGGTCTCGCAACTGGAAGCCCGCGCCAAGGCGCTGGGCTTCCAACCGCAGGCACAGACACTGGAA GTGCACGGCCTGTGTGCCAAGTGCGCGGCTGCGGGTTGA
Upstream 100 bases:
>100_bases GACATTTCGCAGACGGTGTACCTGGCCGGGCGCGAGGGTGCCTTGAAACGCATCGATGCGGCACTCATCAAGATTGGAGC GGCCTGACGCCGGAGCCTGT
Downstream 100 bases:
>100_bases TTGGTGTGAATCGCGCCGCTGCTCCCGTCTCCTAGCACGCAAGCGGTTCGGGTCAATCGCCCCGCGCAAGACGCTAAACA ATCGCGATTCACCGTAGGAG
Product: FUR family transcriptional regulator
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTKHTHTQTHDQEHACTAPHHHVDDANSFVRAVERACSERGLRLTPIRANVLRLIADAGKPVKAYELLDWVREGKGVGAD APPTVYRALDFLMANGFVHKLESVNAFVACHHPNSAQHSVPFLICDRCHSAVELEDRDVVSQLEARAKALGFQPQAQTLE VHGLCAKCAAAG
Sequences:
>Translated_172_residues MTKHTHTQTHDQEHACTAPHHHVDDANSFVRAVERACSERGLRLTPIRANVLRLIADAGKPVKAYELLDWVREGKGVGAD APPTVYRALDFLMANGFVHKLESVNAFVACHHPNSAQHSVPFLICDRCHSAVELEDRDVVSQLEARAKALGFQPQAQTLE VHGLCAKCAAAG >Mature_171_residues TKHTHTQTHDQEHACTAPHHHVDDANSFVRAVERACSERGLRLTPIRANVLRLIADAGKPVKAYELLDWVREGKGVGADA PPTVYRALDFLMANGFVHKLESVNAFVACHHPNSAQHSVPFLICDRCHSAVELEDRDVVSQLEARAKALGFQPQAQTLEV HGLCAKCAAAG
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=135, Percent_Identity=43.7037037037037, Blast_Score=117, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 18814; Mature: 18683
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKHTHTQTHDQEHACTAPHHHVDDANSFVRAVERACSERGLRLTPIRANVLRLIADAGK CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCC PVKAYELLDWVREGKGVGADAPPTVYRALDFLMANGFVHKLESVNAFVACHHPNSAQHSV CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCC PFLICDRCHSAVELEDRDVVSQLEARAKALGFQPQAQTLEVHGLCAKCAAAG CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TKHTHTQTHDQEHACTAPHHHVDDANSFVRAVERACSERGLRLTPIRANVLRLIADAGK CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCC PVKAYELLDWVREGKGVGADAPPTVYRALDFLMANGFVHKLESVNAFVACHHPNSAQHSV CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCC PFLICDRCHSAVELEDRDVVSQLEARAKALGFQPQAQTLEVHGLCAKCAAAG CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]