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The map label for this gene is tse [H]

Identifier: 66767739

GI number: 66767739

Start: 1703480

End: 1705462

Strand: Reverse

Name: tse [H]

Synonym: XC_1413

Alternate gene names: 66767739

Gene position: 1705462-1703480 (Counterclockwise)

Preceding gene: 66767740

Following gene: 66767738

Centisome position: 33.12

GC content: 65.31

Gene sequence:

>1983_bases
GTGCTGCTGGCCTGGTCGATCCGCACCGCTACCGGCTCGCTGGAGATCGCCACCACCACGCTGGACGCCTTCGCCCGCGG
CAACTTCGATGTCGCCCTGCCGCAGGTGCGCGACGAGCAGGCCTGTGAAGTGCTGCGCGGCCTGCGCAAGGTGCAGAGCG
GCATCCGCCACGTCAACGACGAAATCAACCGTGTCTCGCACGAACACGACGCCGGCGAGATCGATGCGCGCATCGATGTG
GCACGGTTTGATGGTGACTTCCGCGCCATGGGCGACGGCATCAACCGCATGGTCGCCAGCCATATCGCGGTAAAGAAGCA
GGCCATGGCCTGCGTGGCCGAATTCGCCCGCGGCAATTTTTCCGCCGAGCTGGAACGCCTGCCCGGCAAGAAGGCCTTCA
TCAACGAGGTCGTGGACCAGATCCGCGGCAACCTCACCGGCCTGGTCGCCGAAGTCAACCGCATGGCAGTCGAACACGAT
GCCGGCGATATCGACGTCGTGATCGACACGCAGCGCTTCACCGGCGATTTCCGTCGCATGGCCGAAGGCATCAATGCGAT
GGTGGCAGGACATATCGCGGTCAAGAAGCAGGCCATCGCCTGCGTGGCCGAGTTCGGCCGCGGCAACTTCACCGCACAAC
TGCCGCAGCTGCCGGGCAAGAAGCGCTTCATCAACGAGACCATCGATCAGGTGCGCGGCAACCTCACCGGCTTGATCCGC
GAGATCAACCACATGTCGGCCGAACACGAAGCCGGCGACATCGATGTGGTGATCGATACCGCGCGCTTCGACGGTGACTT
CCGCAGCATGGCCACCGGCATCAACGAAATGGTGGGTGCGCATATCGCGGTCAAGAAGCTGGCAATGGGCGTGGTGGCAG
AGTTCGGCCGCGGCAACTTCGACGCGCCGCTGGCGCAGCTGCCCGGCAAGAAGGCCTTCATCAACGACACCGTAGAGCGT
GCACGCGGCAACCTGCGCAGCATCTCCGAGGTGATCCAGGTAATGGGCGCGATGGCCGAGGGCGACCTCACGCACACCGT
GGAAGGCCGCTATGAAGGCGCGTTTGCCGACATGCAGCGCTACGTCAACACCACCATGAGCCGCCTCACCGAGATCGTCG
ATGAGGTCAACCGCAACGCCGAGAACCTAGCCAGCGCATCGGAACAAGTCAGTGCCACCGCGCAGGCACTGGCCCAGGCC
GCCAGCGAACAGGCGGCCGGCGTGGAAGAAACCAGCGCCTCGCTTGAGCAGATGACTGCTTCCATTGCACAGAACACCGA
AAACGCCCGCGTCACCGACAGCATGGCCGCCAAGGCTGCCAGCGAGGCGGCCGACGGTGGCGACACCGTGCGCGCCACGG
TGGTGGCGATGAAGGACATCGCCAAGAAGATCGGCATCATCGACGACATCGCCTACCAGACCAATCTGCTGGCGCTCAAT
GCCGCGATCGAAGCCGCACGCGCCGGCGAACACGGCAAGGGCTTTGCGGTGGTGGCCGCAGAGGTACGCAAGCTGGCCGA
GCGCAGCCAGATCGCCGCGCAGGAAATCGGCGAAGTGGCTGGGTCCAGCGTGGAACTGGCCGAAAGCGCCGGCCGCGTGC
TGGGCGAGATGGTGCCTTCGATCCGCCGCACCTCCGATCTGGTGCAGGAGATTGCCGCAGCGTCCGAAGAACAGACCGCC
GGCGTCAGCCAGATCAACACCGCGGTGGGCCAGTTGAACCAGACCACCCAATCCGCCGCGGCCAATGCCGAAGAACTGGC
CGCCACCTCGGAAGAGATGAGCGCGCAGGCCGAGCAGTTGCAGCAGTTGATGGGCTTCTTCCGGCTGGGCAACGGTGGGC
GTGGCAATGTGCCGGCGGCCAAGCCGGTGCAACGTCGGGTTGCGCCTGCCGCCAGCCTGCCGCTGCGCCGTGCCAACGTG
CGTCCGATCAGCGCGGCGGTCGCCGCCGATGTGATCGACGAATCCCAGTTCGCCAGCTTCTGA

Upstream 100 bases:

>100_bases
CATTGCCCTGCCGGTTGTGGTGGTGGTTGCCGGCTTCGCACTCACGCTGTCGCATGCTGCACTGCTGGCGGCGAGCGTGC
TGGCCGCACTCGCCAGCGGT

Downstream 100 bases:

>100_bases
GGAATCGACGATGCAACAGCGCAGCGTAGAGACCGGTGGCGCGCCCGCCATGCCCGCACCCCAGCAATACCTCACCTTCC
TGCTGGGCGGTGAGATGTTC

Product: chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MLLAWSIRTATGSLEIATTTLDAFARGNFDVALPQVRDEQACEVLRGLRKVQSGIRHVNDEINRVSHEHDAGEIDARIDV
ARFDGDFRAMGDGINRMVASHIAVKKQAMACVAEFARGNFSAELERLPGKKAFINEVVDQIRGNLTGLVAEVNRMAVEHD
AGDIDVVIDTQRFTGDFRRMAEGINAMVAGHIAVKKQAIACVAEFGRGNFTAQLPQLPGKKRFINETIDQVRGNLTGLIR
EINHMSAEHEAGDIDVVIDTARFDGDFRSMATGINEMVGAHIAVKKLAMGVVAEFGRGNFDAPLAQLPGKKAFINDTVER
ARGNLRSISEVIQVMGAMAEGDLTHTVEGRYEGAFADMQRYVNTTMSRLTEIVDEVNRNAENLASASEQVSATAQALAQA
ASEQAAGVEETSASLEQMTASIAQNTENARVTDSMAAKAASEAADGGDTVRATVVAMKDIAKKIGIIDDIAYQTNLLALN
AAIEAARAGEHGKGFAVVAAEVRKLAERSQIAAQEIGEVAGSSVELAESAGRVLGEMVPSIRRTSDLVQEIAAASEEQTA
GVSQINTAVGQLNQTTQSAAANAEELAATSEEMSAQAEQLQQLMGFFRLGNGGRGNVPAAKPVQRRVAPAASLPLRRANV
RPISAAVAADVIDESQFASF

Sequences:

>Translated_660_residues
MLLAWSIRTATGSLEIATTTLDAFARGNFDVALPQVRDEQACEVLRGLRKVQSGIRHVNDEINRVSHEHDAGEIDARIDV
ARFDGDFRAMGDGINRMVASHIAVKKQAMACVAEFARGNFSAELERLPGKKAFINEVVDQIRGNLTGLVAEVNRMAVEHD
AGDIDVVIDTQRFTGDFRRMAEGINAMVAGHIAVKKQAIACVAEFGRGNFTAQLPQLPGKKRFINETIDQVRGNLTGLIR
EINHMSAEHEAGDIDVVIDTARFDGDFRSMATGINEMVGAHIAVKKLAMGVVAEFGRGNFDAPLAQLPGKKAFINDTVER
ARGNLRSISEVIQVMGAMAEGDLTHTVEGRYEGAFADMQRYVNTTMSRLTEIVDEVNRNAENLASASEQVSATAQALAQA
ASEQAAGVEETSASLEQMTASIAQNTENARVTDSMAAKAASEAADGGDTVRATVVAMKDIAKKIGIIDDIAYQTNLLALN
AAIEAARAGEHGKGFAVVAAEVRKLAERSQIAAQEIGEVAGSSVELAESAGRVLGEMVPSIRRTSDLVQEIAAASEEQTA
GVSQINTAVGQLNQTTQSAAANAEELAATSEEMSAQAEQLQQLMGFFRLGNGGRGNVPAAKPVQRRVAPAASLPLRRANV
RPISAAVAADVIDESQFASF
>Mature_660_residues
MLLAWSIRTATGSLEIATTTLDAFARGNFDVALPQVRDEQACEVLRGLRKVQSGIRHVNDEINRVSHEHDAGEIDARIDV
ARFDGDFRAMGDGINRMVASHIAVKKQAMACVAEFARGNFSAELERLPGKKAFINEVVDQIRGNLTGLVAEVNRMAVEHD
AGDIDVVIDTQRFTGDFRRMAEGINAMVAGHIAVKKQAIACVAEFGRGNFTAQLPQLPGKKRFINETIDQVRGNLTGLIR
EINHMSAEHEAGDIDVVIDTARFDGDFRSMATGINEMVGAHIAVKKLAMGVVAEFGRGNFDAPLAQLPGKKAFINDTVER
ARGNLRSISEVIQVMGAMAEGDLTHTVEGRYEGAFADMQRYVNTTMSRLTEIVDEVNRNAENLASASEQVSATAQALAQA
ASEQAAGVEETSASLEQMTASIAQNTENARVTDSMAAKAASEAADGGDTVRATVVAMKDIAKKIGIIDDIAYQTNLLALN
AAIEAARAGEHGKGFAVVAAEVRKLAERSQIAAQEIGEVAGSSVELAESAGRVLGEMVPSIRRTSDLVQEIAAASEEQTA
GVSQINTAVGQLNQTTQSAAANAEELAATSEEMSAQAEQLQQLMGFFRLGNGGRGNVPAAKPVQRRVAPAASLPLRRANV
RPISAAVAADVIDESQFASF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=315, Percent_Identity=36.8253968253968, Blast_Score=179, Evalue=7e-46,
Organism=Escherichia coli, GI1788195, Length=336, Percent_Identity=37.797619047619, Blast_Score=173, Evalue=3e-44,
Organism=Escherichia coli, GI2367378, Length=461, Percent_Identity=35.1409978308026, Blast_Score=172, Evalue=5e-44,
Organism=Escherichia coli, GI1788194, Length=314, Percent_Identity=38.5350318471338, Blast_Score=163, Evalue=3e-41,
Organism=Escherichia coli, GI1789453, Length=244, Percent_Identity=36.0655737704918, Blast_Score=138, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 70263; Mature: 70263

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLAWSIRTATGSLEIATTTLDAFARGNFDVALPQVRDEQACEVLRGLRKVQSGIRHVND
CEEEEEEEECCCCEEEEHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
EINRVSHEHDAGEIDARIDVARFDGDFRAMGDGINRMVASHIAVKKQAMACVAEFARGNF
HHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SAELERLPGKKAFINEVVDQIRGNLTGLVAEVNRMAVEHDAGDIDVVIDTQRFTGDFRRM
CHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHH
AEGINAMVAGHIAVKKQAIACVAEFGRGNFTAQLPQLPGKKRFINETIDQVRGNLTGLIR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
EINHMSAEHEAGDIDVVIDTARFDGDFRSMATGINEMVGAHIAVKKLAMGVVAEFGRGNF
HHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DAPLAQLPGKKAFINDTVERARGNLRSISEVIQVMGAMAEGDLTHTVEGRYEGAFADMQR
CCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHH
YVNTTMSRLTEIVDEVNRNAENLASASEQVSATAQALAQAASEQAAGVEETSASLEQMTA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SIAQNTENARVTDSMAAKAASEAADGGDTVRATVVAMKDIAKKIGIIDDIAYQTNLLALN
HHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AAIEAARAGEHGKGFAVVAAEVRKLAERSQIAAQEIGEVAGSSVELAESAGRVLGEMVPS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IRRTSDLVQEIAAASEEQTAGVSQINTAVGQLNQTTQSAAANAEELAATSEEMSAQAEQL
HHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QQLMGFFRLGNGGRGNVPAAKPVQRRVAPAASLPLRRANVRPISAAVAADVIDESQFASF
HHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MLLAWSIRTATGSLEIATTTLDAFARGNFDVALPQVRDEQACEVLRGLRKVQSGIRHVND
CEEEEEEEECCCCEEEEHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
EINRVSHEHDAGEIDARIDVARFDGDFRAMGDGINRMVASHIAVKKQAMACVAEFARGNF
HHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SAELERLPGKKAFINEVVDQIRGNLTGLVAEVNRMAVEHDAGDIDVVIDTQRFTGDFRRM
CHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHH
AEGINAMVAGHIAVKKQAIACVAEFGRGNFTAQLPQLPGKKRFINETIDQVRGNLTGLIR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
EINHMSAEHEAGDIDVVIDTARFDGDFRSMATGINEMVGAHIAVKKLAMGVVAEFGRGNF
HHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DAPLAQLPGKKAFINDTVERARGNLRSISEVIQVMGAMAEGDLTHTVEGRYEGAFADMQR
CCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHH
YVNTTMSRLTEIVDEVNRNAENLASASEQVSATAQALAQAASEQAAGVEETSASLEQMTA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SIAQNTENARVTDSMAAKAASEAADGGDTVRATVVAMKDIAKKIGIIDDIAYQTNLLALN
HHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AAIEAARAGEHGKGFAVVAAEVRKLAERSQIAAQEIGEVAGSSVELAESAGRVLGEMVPS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IRRTSDLVQEIAAASEEQTAGVSQINTAVGQLNQTTQSAAANAEELAATSEEMSAQAEQL
HHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QQLMGFFRLGNGGRGNVPAAKPVQRRVAPAASLPLRRANVRPISAAVAADVIDESQFASF
HHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]